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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069835 ID=TCONS_00069835|Name=TCONS_00069835|organism=Clytia hemisphaerica|type=transcript|length=259bp
GAAAGActtcaaagttttttattcatATTGCTTTTCTAGAGGAACAAGTG
CTTGCTGATAGAGACGAGACAATAAGAATGCAGTCGAATGCAATTATCAC
CAATTCCAACGAAATTGAAAGGCTGCGGGGTCTTATCCAAAGCCAGGCAA
CAAATACAAGCACAAAGAAAGTGGAACTATTTCGGGACACAGGAGTGTTT
GTACGACCGCGCACTGCCTGCAAGGCCTTGCTCAAGAAAATGGCGAACAA
TTGTGTGCC Run BLAST on NCBI transcript from alignment at scaffold_51:84778..85696+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069835 ID=TCONS_00069835|Name=TCONS_00069835|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at scaffold_51:84778..85696+ (Clytia hemisphaerica)
GAAAGActtcaaagttttttattcatATTGCTTTTCTAGAGGAACAAGTG
CTTGCTGATAGAGACGAGACAATAAGAATGCAGTCGGTAAAGTTATAAGC
AGgttgtaaattttaaatttataagATGTTAGAAAGAGTTAGGAGTACAA
GTTTCTTACATagttaaaaaagtatttttactAGATAATTCATTCTGAAA
ATTAAATTGTTTGAGAGGTATAATTAAATTCTGACAGCTGTGTAATTAAT
TCAGATAATTCAGAATACTTCCAATGGAGATGGAAAATAATACACAGGTT
TCAAATTAAACTACCTGcccgaaaaatatcaagtaaacataGAGAGCGAA
AGGCGGAAatgcttgattttttttcatgcaaATTACATGGGATTAAAGAA
AAAGCtacgcaaaaatttaatttgaaatccgtgtattgttatattatgat
aGCATATCCGTGATTAcacattatttttatttctatgtAGAATGCAATTA
TCACCAATTCCAACGAAATTGAAAGGCTGCGGGGTCTTATCCAAAGCCAG
GCAACAAATACAGTATGTACATATATATACTACTGCTAATATTGCTGCTA
CTACTGCTACTTCTACTATTTCTACTAAATTATTATTACTAGATACTACT
CATGAAATTTTTTCGGATACAGCAGTCTACTTTTGAATAGAGAGTTTAAA
TGCTGAatttaaaataatatatatattaTTACTGTTGATCTTGAAATAAT
ATTTACCGTTTTTTGCAATTGTTCTGTATCAAATTTGATAGTCAaggtaa
tttttattttaatctcAGAGCACAAAGAAAGTGGAACTATTTCGGGACAC
AGGAGTGTTTGTACGACCGCGCACTGCCTGCAAGGCCTTGCTCAAGAAAA
TGGCGAACAATTGTGTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069835-exon-scaffold_51-1491911889:84778..84863 | TCONS_00069835-exon-scaffold_51-1491911889:84778..84863 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1510915933:84778..84863 | TCONS_00069835-exon-scaffold_51-1510915933:84778..84863 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1575043694:84778..84863 | TCONS_00069835-exon-scaffold_51-1575043694:84778..84863 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1491911889:85268..85339 | TCONS_00069835-exon-scaffold_51-1491911889:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1510915933:85268..85339 | TCONS_00069835-exon-scaffold_51-1510915933:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1575043694:85268..85339 | TCONS_00069835-exon-scaffold_51-1575043694:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1491911889:85596..85696 | TCONS_00069835-exon-scaffold_51-1491911889:85596..85696 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1510915933:85596..85696 | TCONS_00069835-exon-scaffold_51-1510915933:85596..85696 | Clytia hemisphaerica | exon |
| TCONS_00069835-exon-scaffold_51-1575043694:85596..85696 | TCONS_00069835-exon-scaffold_51-1575043694:85596..85696 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_51 | supercontig | scaffold_51:84778..85696 + |
Blast
The following BLAST results are available for this feature:
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