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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069834 ID=TCONS_00069834|Name=TCONS_00069834|organism=Clytia hemisphaerica|type=transcript|length=235bp
ATGTTCAGAGTGCTGGAAAAAAGAATCTGATCTCTTTCATCTGAGACAGC
AGCTAGAAGAAAAATGCAATTATCACCAATTCCAACGAAATTGAAAGGCT
GCGGGGTCTTATCCAAAGCCAGGCAACAAATACAAGCACAAAGAAAGTGG
AACTATTTCGGGACACAGGAGTGTTTGTACGACCGCGCACTGCCTGCAAG
GCCTTGCTCAAGAAAATGGCGAACAATTGTGTGCC Run BLAST on NCBI transcript from alignment at scaffold_51:83885..85696+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069834 ID=TCONS_00069834|Name=TCONS_00069834|organism=Clytia hemisphaerica|type=transcript|length=1812bp|location=Sequence derived from alignment at scaffold_51:83885..85696+ (Clytia hemisphaerica)
ATGTTCAGAGTGCTGGAAAAAAGAATCTGATCTCTTTCATCTGAGACAGC
AGCTAGAAGAAAGTGAGTTCTTTGCTTCTTTCAACTCAACagaaagtgca
ttttttgggtcaccgataaaccagttatcagacgcAAGCTCGTACAATac
agaaatattttactcgttccgaatATTTAGGCTCAGAAAatattatgcaa
aaaaatttggagCTCGTAGAATATTTCTTGTATTGTACTCACAACTTTTT
TAAAACGTAAAACTTTGTGCTGAACCTTTTTACCTCCTTTGTCATATTAT
GCACATTAAGTTGGTgtgctcataaaaaaattaaatggaaAATGGAAGAA
TTCTCATGAAAAactttatatttatatataatTATCGTGTTTGGGCAACT
AGATAATacatggcatggaccaggggtttaggtcccctaagaaaataggt
accccctgaattttaggtaccccaaacaacagacgttaGTAGGTACTCCC
TGTGATTGTtaccccctgtgacttgagtatatgtcaagaaatgataaaag
atagattagataaaagcaagatatATTATATAGTTCCCCagcccccagac
cttactgTATAAAAGTTAGGTACCCatagagaaattaaaaaaaaaaatcc
ttccCCCAGCCTTTTTCAGGAAAGTTTTGATTGTAGCCCCCCTGGGGTTC
ATGCCATGTAATAACAGTAAAGATTATAAAAGAACTaccaaaacatcaaa
tttaGACCTTTTATATGACTTTCACTCTTATATAAGCTAAGTACACATTA
AGTACAACCCATATAAAATGATTTATGaggattttttgtttcatattttt
actATTCTCTAcgtatttgtttttatttccttttttctatCAAGAAAGAc
ttcaaagttttttattcatATTGCTTTTCTAGAGGAACAAGTGCTTGCTG
ATAGAGACGAGACAATAAGAATGCAGTCGGTAAAGTTATAAGCAGgttgt
aaattttaaatttataagATGTTAGAAAGAGTTAGGAGTACAAGTTTCTT
ACATagttaaaaaagtatttttactAGATAATTCATTCTGAAAATTAAAT
TGTTTGAGAGGTATAATTAAATTCTGACAGCTGTGTAATTAATTCAGATA
ATTCAGAATACTTCCAATGGAGATGGAAAATAATACACAGGTTTCAAATT
AAACTACCTGcccgaaaaatatcaagtaaacataGAGAGCGAAAGGCGGA
AatgcttgattttttttcatgcaaATTACATGGGATTAAAGAAAAAGCta
cgcaaaaatttaatttgaaatccgtgtattgttatattatgataGCATAT
CCGTGATTAcacattatttttatttctatgtAGAATGCAATTATCACCAA
TTCCAACGAAATTGAAAGGCTGCGGGGTCTTATCCAAAGCCAGGCAACAA
ATACAGTATGTACATATATATACTACTGCTAATATTGCTGCTACTACTGC
TACTTCTACTATTTCTACTAAATTATTATTACTAGATACTACTCATGAAA
TTTTTTCGGATACAGCAGTCTACTTTTGAATAGAGAGTTTAAATGCTGAa
tttaaaataatatatatattaTTACTGTTGATCTTGAAATAATATTTACC
GTTTTTTGCAATTGTTCTGTATCAAATTTGATAGTCAaggtaatttttat
tttaatctcAGAGCACAAAGAAAGTGGAACTATTTCGGGACACAGGAGTG
TTTGTACGACCGCGCACTGCCTGCAAGGCCTTGCTCAAGAAAATGGCGAA
CAATTGTGTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069834-exon-scaffold_51-1491911889:83885..83946 | TCONS_00069834-exon-scaffold_51-1491911889:83885..83946 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1510915933:83885..83946 | TCONS_00069834-exon-scaffold_51-1510915933:83885..83946 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1575043694:83885..83946 | TCONS_00069834-exon-scaffold_51-1575043694:83885..83946 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1491911889:85268..85339 | TCONS_00069834-exon-scaffold_51-1491911889:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1510915933:85268..85339 | TCONS_00069834-exon-scaffold_51-1510915933:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1575043694:85268..85339 | TCONS_00069834-exon-scaffold_51-1575043694:85268..85339 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1491911889:85596..85696 | TCONS_00069834-exon-scaffold_51-1491911889:85596..85696 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1510915933:85596..85696 | TCONS_00069834-exon-scaffold_51-1510915933:85596..85696 | Clytia hemisphaerica | exon |
| TCONS_00069834-exon-scaffold_51-1575043694:85596..85696 | TCONS_00069834-exon-scaffold_51-1575043694:85596..85696 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_51 | supercontig | scaffold_51:83885..85696 + |
Blast
The following BLAST results are available for this feature:
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