TCONS_00069823 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069823
Unique NameTCONS_00069823
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069823 ID=TCONS_00069823|Name=TCONS_00069823|organism=Clytia hemisphaerica|type=transcript|length=1234bp
TTTCACACCAACTCTCAATGAAGATAGACCTTGATTATGAAGTGCATTGT
CACCCAGAAACCAACACTCAACTAACACCGGTCGTCATTTCACATGCATT
GTATGGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACTACA
TCACTAAAAGAAAGGTGGTATGTTACGACGCTGTGAACCATGGTTGTAGC
AGTAGTCATGAAGATATGGCTTATAAAGACATGGCGCTAGATCTGGTCAT
CTTGTTGGAGAAACTTAACCTTCCAACTGTTAGTTGTATTGGCCATCGTA
TGGGCGGTAAAACTTTAATGACACTAGCCTTGACGCAACCAGAACGTTTT
GAACAAGTGGCCATTATCGACATCGCGCCTAGTGCTGAAGTCCTGATTGA
GAATACAACCAAGGATTTGGAGAAGCTGGCGAACCTTCAGTTGTACAAAT
TCCAATGTAAAGAAGATTTGGAGGCTTATTTGAAAGAGCAACAACTTGAT
TTGCGTTTGATGCGTTCCATCTTATTCAGTATAATTCAACGTAACGATAA
ATTGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAAATTATCAAGATG
TGTTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTTAACGGCCCATCA
CTCTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTtttGGGGGATTTTCC
ATGGGTATACAAGCGATTCCCAAGTGCAAAGATCCAATACCTACCAGAAC
TTGATCGCTGGTTACATTTGGAACGTCCTGACAAATTACTGGAAATTTTC
GGTGAGTTTTTCATGGAGAGAGAAGATACGAGCAATGAAAAACGAACAAT
GTCAATCTCTGGGTGATTGGTGAtgggttgttttttttgtcacgTGACCA
TTTATTTATGATAGGTACACCCTTTAATCAGACTCAGACTCTTTGTTCTT
GTGGTATTTCAAACTAAAGCCGTCATTGTGGGGTTTACAcagctggcacg
caacgttgttttaacgttcaaataacgttatttggacgttatgtatgtca
catggacgttgttttgacgttgtgtgccggctgggtagTAAAAGATATCG
CATACGCAAGATTGAATTTCTCCAATATcttaggctgcacacatcccctc
tgataagttttgatataggggatgcgaatcaggctcacaaaaccgttccg
aacttagcaaaaaatctgctaaccaaaaaaagag
Run BLAST on NCBI

protein sequence of TCONS_00069823-protein

>TCONS_00069823-protein ID=TCONS_00069823-protein|Name=TCONS_00069823-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
SHQLSMKIDLDYEVHCHPETNTQLTPVVISHALYGCKSDWSSIGKELNYI
TKRKVVCYDAVNHGCSSSHEDMAYKDMALDLVILLEKLNLPTVSCIGHRM
GGKTLMTLALTQPERFEQVAIIDIAPSAEVLIENTTKDLEKLANLQLYKF
QCKEDLEAYLKEQQLDLRLMRSILFSIIQRNDKLNLTVNLANVRKNYQDV
LAFPPFQPDVTFNGPSLFITGFQSLEKFLGDFPWVYKRFPSAKIQYLPEL
DRWLHLERPDKLLEIFGEFFMEREDTSNEKRTMSISG
Run BLAST on NCBI

transcript from alignment at scaffold_509:87080..93905-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069823 ID=TCONS_00069823|Name=TCONS_00069823|organism=Clytia hemisphaerica|type=transcript|length=6826bp|location=Sequence derived from alignment at scaffold_509:87080..93905- (Clytia hemisphaerica)
TTTCACACCAACTCTCAATGTGGATAAAATCTTAAGGCTTCACTTTTTCT
TGCTTCAGAAAAATTGAAGATTAACCTCTTCAGGGCTTTAAACTCAAATG
ATTTTAACTCGTTTTCCGCGTGTACTTTTAACAAGCTAAAGACTCCAACC
ATCATAATTCGTTTTTATTGCCTCTCTAATCATGACCAATCCATCACCGT
TTTGAATTTCCTCGCTTATTTTGAGAGCTCTAAGGTTGACATTGTTTTCT
TCTTTCGTTCCGCAGGAAGATAGACCTTGATTATGAAGTGCATTGTCACC
CAGAAACCAACACTCAACTAACACCGGTCGTCATTTCACATGCATTGTAT
GGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACTACATCAC
TAAAAGAAAGGTAAATTCCAGTCCCCTAAGAGTGTACCTTAAGGATTAAT
TTTCGCGTGGAATTTCGAGAATCTAAAAGTTTCGCGTGGATTAAAGCTCT
CTTTCATCTAATTGTTTCACTTTATTAAGGTTTTTGGCCGAAATTCTGAT
TTTAAAATTTTCGCGAGGACTAAGTTTCGCAAAAATTACCAAAATTCGCG
AAAATCGCGAAAATTAATCCAAACCAAATTTAATCCACTTAAGGTACCCG
AAAGTCTCGACACCGTGTCATAGAGTGATAAAAAAATCGCGTGTTGAGAT
AAGGATAGGCTTGGAAATAATGGGCTTCTATTCACGGTATGCGTCATTAC
AATTACAATGTCTTCTGACATTACATCACGGATCCGATTACATCACAGAT
GATTGGTTGTAAGAGACGTAAAATCAGTCAATACGTCATTTTCAACCAAC
CAGTTGTTGGTTCCGTGGAAGACATTGCACAATGATACATATCATGAATA
GTATTTTGTGTATTTCAGATATACTGTACGGTGGGTGACAGACTTTTTAA
TATTTAATATTTTTGCTTTAAAGTTTTTAAATCTCAAGTAACCGTCCTGG
AAAATGAAGACTGGCCTAAAACAGTACTGTAAAATAAAAACTGTAATGAG
GCTAAGTAGGAATTTTAGTAGGGGAATTGCTGGTTTCGGGTTGGGGAGTT
GCCAGTTTTGAGTTTGGGGAGTGACTAGTTTCGAGCTACCGGAAAGAAAA
GCATGTTTTTTTTAAAAGCACTGACCTTTATAAAAAAACTTGAACTCTGG
ACCCTGAACTTTGGTTGGCTAGAATCGAAGAACTACCTCCAAGGCTTTTA
TCTTGACGAAGTTAACGTCCGTTACAGGGAGGTAAACGTGAGAAGATATC
GATGCACAGAGTTTACTGCCGGAGTTTCGAAGACCTCTAATTCTAATTCC
TTTAGAAAGCAAAACCCGTTCACGAATTTTCTCACTTCTTTAAGATTATT
CTTTTTAAGCAGTGACAATTCTTGGACTATACATCATTATACCTAGTGGT
ATACCCCAGGTATACAACCATGGACAAAGGGATTTCCCTGTGAAATCACA
AATGATTTTTAAGCGCGTTAAACTTCAGTTGGGAAGTAGAGTTTTAACTC
TGAGTTTAAACATGAGACTTAAGACTTACGACCTTAGGATCTTAAGATTT
AAAAGCTCAAATTTGCTCCAATAAGGTTTGGAATATAGCCTAGAAGCCAC
TGGACCCCTCCAAAATCGAAATATTCAATGATAGAAAGCGGAAGGGCTAA
AATTGCAATTTTCGCCCGAAGTTTAAATTTGAAAAATGTTAAAATACGCT
AAAATCTCAATATCTTTCGACCATGATTGTATCTAGTGGTATACTCACTG
ACTTTTATATACCCTGGACCAAGCTTCTCAATCCCAGCCAAGGAAAATCT
TTGATCGGAGTTTTTTGAAAATTGGTACCCTACTGGCGGTACTACTCGAT
AGCGGTGTAAATGCATCGAGAGCGCTAGGTCTACTTTTCCTCGAATTCTT
TTGATGATGTAGCGGCGTTAGACGTTAATTTTTAACNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGATATTGCTTGGTCCAGGGTTATATAAAGGT
CAGTGGGTATACTCCATTAGTATTACCCAAGATGTGAAAAAGAGATAATT
TTCCGAATTCTTACCATCACCCTCAGGTGGTATGTTACGACGCTGTGAAC
CATGGTTGTAGCAGTAGTCATGAAGATATGGCTTATAAAGACATGGCGCT
AGATCTGGTCATCTTGTTGGAGAAACTTAACCTTCCAACTGTTAGTTGTA
TTGGTAAGTTGTTGTATTGGTAGTGTTTTGTGGAAGATTGGACCATTCCA
TTTTGTATCCATAGAGGGGGTGGGCGCACATTTCCAAAGGGTAATCGGAG
AAGAATTTTCCAGGGGGTTCTAAACGAGTATTTTAGGTAAAGGTTTAATC
TAAAATTTCCAGGGGTAAAAGACTCATTTTAATTCGTCCACCCTGACTTT
TAAGGTATGAAAATAATTTTTGCAAGGCTTCTTTTGCAAATTTTGCCATC
GTCCAGGGGGTATCCACACATTTCTAAGAATCTGTTTTTGCCTTGAAAAT
GTTCGTCCACCCCCTGTATGGAAATTTGATTTTTGTCCATGACAAATCCT
TCCCCTTTACTAATAGGTTTTGTCCTAATCAATCCTAATTGTAGACATCC
TTGACTAAAAGTCTAATGACCGATGAAACCCTCTTTTGTTGTAAAACCCC
TCTTTTGTTATATGCTTTGACACAATTCTAGGTTTTTGTATTCCTGAGAG
TTCAGGTAACGCTGTTTTGTCACTTTGTGCCTCAAATTGTTCTTATCCTG
TTCTTATTTACAGGAAGTAACTAAGGTATTTTAGGCATTATACCCAATTT
GTTTAATACTTTGACCCCTTGAATTGCTTGAAATTGAGTAATTTCAGACT
CAGCATTGTTCTTAAATTGGTCTTATTTTTTGGTGATTTTGAGCCTCATT
GTTCTTATAAAATTGTTCTTATAACTATATCACCTATCTTGTTGATTCTT
CGTAGGCCATCGTATGGGCGGTAAAACTTTAATGACACTAGCCTTGACGC
AACCAGAACGTTTTGAACAAGTGGCCATTATCGACATCGCGCCTAGTGCT
GAAGTCCTGATTGAGAATACAACCAAGGATTTGGAGAAGCTGGCGAACCT
TCAGTTGTACAAATTCCAATGTAAAGAAGATTTGGAGGCTTATTTGAAAG
AGCAACAACTTGTAAGGCTTTCTTTGTATACACCCAAATCTAGTTAATAG
CGAGTTTATGTATTTGCTCTTTTGAGGATGGTAGAGTGATTGAAACAATT
TGGAATAACCTGCACTTCTGACCCGCAAAATCGAGGACGGTAAAACTGCT
GATTTACCGTCGTTCTCAGTCGGTTAGGATGTAGACAATTAGAACCTTAC
CGTCTCCGTCACAGAAAAACACAGATACATAAACTCGGTAATATCTATCC
AATGCCCTCCCAAGATGTTTCCTATAGGAAAGAAATAAGAAGATGCTCGA
AGGTTTAAGCCTTATTTTAAGTTCATTCCTTATTAAACCTCGGAATAGGT
TGCACTAAATTCTGTCTCCAATTGACGGAAATAAATGAACGCTAACTACC
AAAATAGCAAAAAAAGGTTATGTTTACTTTAATTTTTTACACTGTTGTAT
TCAAATTTCGATTCTTTTGTTCATGGGGATGATGCATAGAGAATCACGTG
TGCTTAAAACGTACAAGATCCCTGTTCTAGGCTGGACTAAGTCATTTAGA
CGCCTCTGCAGTGGAACCAACCGCTCGAGTTTTCGCTCTTAATTTTTGTC
CAAATTTGTGTAGATTGTCGGTTCATCTGCATTTACGGTTTCCAATCGCT
CTGGTATGTGTTACGGATAGGAAGTGTTCATACTCACTTTGGAATGTTTC
GGAGCAAGAAAACGGAGCAGTTCCATTCCGATGAAAAAAAAGTGAAGCGA
AACCGTTTCGATTGGTTTTGCCTTTTTAACGTCTTCTTTTTTGACGCTTT
TAATTATGACTTTCACACTTGTTTACGGGACCGTTTCGTTACGGAACGAT
ACGGAACCGTAATATCTGAACATAGTCTTAGCACAACTTTTTGGACCTAC
CCCGGTGGAGGTCCTATAAATTAACCTGTGTTTGTTCGTTCGTCCGTTCG
TTCGTCTGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGAT
TTTTGGTACAAAGGTGGAAAATGGTGGTGGCCAAAATGTGACGGAGCCCG
ATTTTCGAGAAAAAAAAATTTTTGGGCAAATTTGGGCCAAAAAACGGCTA
AAAAACAGGTTTTTTGGACTTTGTGGAAAAATGGATCATTAATTTTTTTT
GATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAG
CAGAATTTTGCAAAAAATTTTTGTTGGCTCAAAAAACGCATGTTTATCTA
TAAGAATTACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTC
AATTTTTTTATNNNNNNNNNNNNNNNNNNNNNNNNATGTTTTTTTTGCTC
ATGGGGGCTTACTTTTGAAGAATATGTGTGTTTAAGACAGGAAATTTTAG
TTGCTTGGCGTGTTCTCATAGAAAAACTGGCCAAATTCGATATTTTTTTA
TAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTTT
TTCATTCTTTATGATATTTTGCACAAATATGTATAACCATAAACCTTCGA
ATGTGACGGAGTCTGATTTTCAAATAAAAATGTTATTGGGCAAATTTGGG
CCAAAAAACCGGCTAAAAAACGGGTTTTTGGACTTCGTGAAATAATGGAT
CATTGTTTTTTTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAA
GCAGATTTTTGTAAAAAAAGAATTTTTCGGCTCAAAAAACGCATCTTTAT
CTATAAGAATCACTATTAATAAGCATACATCAATTTTGTAGCCGAATTAC
TCAATTTTTTATGAGATAGATGTTTTTTTGCTCACGAAGTCTTGAATATG
AAAGAATTATTTCAAGAGCATGAAATCTGGTTTCTAAAAGTTTTTTTTAT
AAAAAAACAAACGACTAATTTAAATAGATCGTTACTTTTTGTGTTCTGAA
TGATTGTTTAATGGTCACGTCACGTAGATATCAATTATAAATGTGTTAAA
TGCATAACCAGGTAGGTCCGTAAAAGTATCACTTGTTCTTTCTCCTTTCG
CTTCAGGATTTGCGTTTGATGCGTTCCATCTTATTCAGTATAATTCAACG
TAACGATAAATTGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAAATT
ATCAAGATGTGTTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTTAAC
GGCCCATCACTCTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTGTAAGT
TTTTTAAGGAACAGATAGGTAGTTAGACATGGTGTTTCAAGAGCTGCTGG
CATACTAATAGATTCGTGCTCCTACACTATAGGTCTGTGATTCACACTAG
GATATTTCAAGAGCTAAGCACCAGTTTGCAGAAATCTTATGTAAATGTAT
ACATGTTTTTTTAAGCATACAGGCTCGGAGATGCTTAGTTCAGGGCTTGT
CAAGGCAAATGCTTCCAAAGGATGTTTATATCCAAGGCAAAACTTTAGGG
AAAATCCGAAAAATTGCAGCCAAAAACAGGCAAAATCAGGAAAATTCATT
TTTCATAGGCTTAGGGTAATGCTTAGTACATGCTTAATTTTTGCTATATC
TAAGCCTGTATATGCTTTTAAGTGCAATATGCTGATAAAAAACATATAGG
ATGGCTGAGTAATTAAGTGACGTAGTCTTCCATACGCTGAAAGAATTTCT
GACAATGCTTGTAAGAAAAAAAATATTTTTACAGTAGTGTAAAATGAAAT
TACCGTAAACTTCACAAAAAAAATTTCCAGAATGGTTATAGGTATAAATC
ACATATTTCCTTACTTTTTAATTTTAGTTTGGGGGATTTTCCATGGGTAT
ACAAGCGATTCCCAAGTGCAAAGATCCAATACCTACCAGAACTTGATCGC
TGGTTACATTTGGAACGTCCTGACAAATTACTGGAAATTTTCGGTGAGTT
TTTCATGGAGAGAGAAGATACGAGCAATGAAAAACGAACAATGTCAATCT
CTGGGTGATTGGTGATGGGTTGTTTTTTTTGTCACGTGACCATTTATTTA
TGATAGGTACACCCTTTAATCAGACTCAGACTCTTTGTTCTTGTGGTATT
TCAAACTAAAGCCGTCATTGTGGGGTTTACACAGCTGGCACGCAACGTTG
TTTTAACGTTCAAATAACGTTATTTGGACGTTATGTATGTCACATGGACG
TTGTTTTGACGTTGTGTGCCGGCTGGGTAGTAAAAGATATCGCATACGCA
AGATTGAATTTCTCCAATATCTTAGGCTGCACACATCCCCTCTGATAAGT
TTTGATATAGGGGATGCGAATCAGGCTCACAAAACCGTTCCGAACTTAGC
AAAAAATCTGCTAACCAAAAAAAGAG

Coding sequence (CDS) from alignment at scaffold_509:87080..93905-

>TCONS_00069823 ID=TCONS_00069823|Name=TCONS_00069823|organism=Clytia hemisphaerica|type=CDS|length=5184bp|location=Sequence derived from alignment at scaffold_509:87080..93905- (Clytia hemisphaerica)
TTTGGGGGATTTTCCATGGGTATACAAGCGATTCCCAAGTGCAAAGATCC
AATACCTACCAGAACTTGATCGCTGGTTACATTTGGAACGTCCTGACAAA
TTACTGGAAATTTTCGGTGAGTTTTTCATGGAGAGAGAAGATACGAGCAA
TGAAAAACGAACAATGTCAATCTCTGGGTGAGATTTGCGTTTGATGCGTT
CCATCTTATTCAGTATAATTCAACGTAACGATAAATTGAACTTAACCGTC
AACCTCGCCAACGTCCGCAAAAATTATCAAGATGTGTTGGCGTTCCCGCC
CTTCCAACCAGACGTCACTTTTAACGGCCCATCACTCTTCATAACTGGTT
TCCAGTCCCTTGAAAAGTTGCCATCGTATGGGCGGTAAAACTTTAATGAC
ACTAGCCTTGACGCAACCAGAACGTTTTGAACAAGTGGCCATTATCGACA
TCGCGCCTAGTGCTGAAGTCCTGATTGAGAATACAACCAAGGATTTGGAG
AAGCTGGCGAACCTTCAGTTGTACAAATTCCAATGTAAAGAAGATTTGGA
GGCTTATTTGAAAGAGCAACAACTTGTGGTATGTTACGACGCTGTGAACC
ATGGTTGTAGCAGTAGTCATGAAGATATGGCTTATAAAGACATGGCGCTA
GATCTGGTCATCTTGTTGGAGAAACTTAACCTTCCAACTGTTAGTTGTAT
TGGAAGATAGACCTTGATTATGAAGTGCATTGTCACCCAGAAACCAACAC
TCAACTAACACCGGTCGTCATTTCACATGCATTGTATGGCTGCAAAAGTG
ATTGGTCTTCTATTGGTAAAGAACTCAACTACATCACTAAAAGAAAGTCA
CACCAACTCTCAATTTTGGGGGATTTTCCATGGGTATACAAGCGATTCCC
AAGTGCAAAGATCCAATACCTACCAGAACTTGATCGCTGGTTACATTTGG
AACGTCCTGACAAATTACTGGAAATTTTCGGTGAGTTTTTCATGGAGAGA
GAAGATACGAGCAATGAAAAACGAACAATGTCAATCTCTGGGTGAGATTT
GCGTTTGATGCGTTCCATCTTATTCAGTATAATTCAACGTAACGATAAAT
TGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAAATTATCAAGATGTG
TTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTTAACGGCCCATCACT
CTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTGCCATCGTATGGGCGGT
AAAACTTTAATGACACTAGCCTTGACGCAACCAGAACGTTTTGAACAAGT
GGCCATTATCGACATCGCGCCTAGTGCTGAAGTCCTGATTGAGAATACAA
CCAAGGATTTGGAGAAGCTGGCGAACCTTCAGTTGTACAAATTCCAATGT
AAAGAAGATTTGGAGGCTTATTTGAAAGAGCAACAACTTGTGGTATGTTA
CGACGCTGTGAACCATGGTTGTAGCAGTAGTCATGAAGATATGGCTTATA
AAGACATGGCGCTAGATCTGGTCATCTTGTTGGAGAAACTTAACCTTCCA
ACTGTTAGTTGTATTGGAAGATAGACCTTGATTATGAAGTGCATTGTCAC
CCAGAAACCAACACTCAACTAACACCGGTCGTCATTTCACATGCATTGTA
TGGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACTACATCA
CTAAAAGAAAGTCACACCAACTCTCAATTTTGGGGGATTTTCCATGGGTA
TACAAGCGATTCCCAAGTGCAAAGATCCAATACCTACCAGAACTTGATCG
CTGGTTACATTTGGAACGTCCTGACAAATTACTGGAAATTTTCGGTGAGT
TTTTCATGGAGAGAGAAGATACGAGCAATGAAAAACGAACAATGTCAATC
TCTGGGTGAGATTTGCGTTTGATGCGTTCCATCTTATTCAGTATAATTCA
ACGTAACGATAAATTGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAA
ATTATCAAGATGTGTTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTT
AACGGCCCATCACTCTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTGCC
ATCGTATGGGCGGTAAAACTTTAATGACACTAGCCTTGACGCAACCAGAA
CGTTTTGAACAAGTGGCCATTATCGACATCGCGCCTAGTGCTGAAGTCCT
GATTGAGAATACAACCAAGGATTTGGAGAAGCTGGCGAACCTTCAGTTGT
ACAAATTCCAATGTAAAGAAGATTTGGAGGCTTATTTGAAAGAGCAACAA
CTTGTGGTATGTTACGACGCTGTGAACCATGGTTGTAGCAGTAGTCATGA
AGATATGGCTTATAAAGACATGGCGCTAGATCTGGTCATCTTGTTGGAGA
AACTTAACCTTCCAACTGTTAGTTGTATTGGAAGATAGACCTTGATTATG
AAGTGCATTGTCACCCAGAAACCAACACTCAACTAACACCGGTCGTCATT
TCACATGCATTGTATGGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGA
ACTCAACTACATCACTAAAAGAAAGTCACACCAACTCTCAATTTTGGGGG
ATTTTCCATGGGTATACAAGCGATTCCCAAGTGCAAAGATCCAATACCTA
CCAGAACTTGATCGCTGGTTACATTTGGAACGTCCTGACAAATTACTGGA
AATTTTCGGTGAGTTTTTCATGGAGAGAGAAGATACGAGCAATGAAAAAC
GAACAATGTCAATCTCTGGGTGAGATTTGCGTTTGATGCGTTCCATCTTA
TTCAGTATAATTCAACGTAACGATAAATTGAACTTAACCGTCAACCTCGC
CAACGTCCGCAAAAATTATCAAGATGTGTTGGCGTTCCCGCCCTTCCAAC
CAGACGTCACTTTTAACGGCCCATCACTCTTCATAACTGGTTTCCAGTCC
CTTGAAAAGTTGCCATCGTATGGGCGGTAAAACTTTAATGACACTAGCCT
TGACGCAACCAGAACGTTTTGAACAAGTGGCCATTATCGACATCGCGCCT
AGTGCTGAAGTCCTGATTGAGAATACAACCAAGGATTTGGAGAAGCTGGC
GAACCTTCAGTTGTACAAATTCCAATGTAAAGAAGATTTGGAGGCTTATT
TGAAAGAGCAACAACTTGTGGTATGTTACGACGCTGTGAACCATGGTTGT
AGCAGTAGTCATGAAGATATGGCTTATAAAGACATGGCGCTAGATCTGGT
CATCTTGTTGGAGAAACTTAACCTTCCAACTGTTAGTTGTATTGGAAGAT
AGACCTTGATTATGAAGTGCATTGTCACCCAGAAACCAACACTCAACTAA
CACCGGTCGTCATTTCACATGCATTGTATGGCTGCAAAAGTGATTGGTCT
TCTATTGGTAAAGAACTCAACTACATCACTAAAAGAAAGTCACACCAACT
CTCAATTTTGGGGGATTTTCCATGGGTATACAAGCGATTCCCAAGTGCAA
AGATCCAATACCTACCAGAACTTGATCGCTGGTTACATTTGGAACGTCCT
GACAAATTACTGGAAATTTTCGGTGAGTTTTTCATGGAGAGAGAAGATAC
GAGCAATGAAAAACGAACAATGTCAATCTCTGGGTGAGATTTGCGTTTGA
TGCGTTCCATCTTATTCAGTATAATTCAACGTAACGATAAATTGAACTTA
ACCGTCAACCTCGCCAACGTCCGCAAAAATTATCAAGATGTGTTGGCGTT
CCCGCCCTTCCAACCAGACGTCACTTTTAACGGCCCATCACTCTTCATAA
CTGGTTTCCAGTCCCTTGAAAAGTTGCCATCGTATGGGCGGTAAAACTTT
AATGACACTAGCCTTGACGCAACCAGAACGTTTTGAACAAGTGGCCATTA
TCGACATCGCGCCTAGTGCTGAAGTCCTGATTGAGAATACAACCAAGGAT
TTGGAGAAGCTGGCGAACCTTCAGTTGTACAAATTCCAATGTAAAGAAGA
TTTGGAGGCTTATTTGAAAGAGCAACAACTTGTGGTATGTTACGACGCTG
TGAACCATGGTTGTAGCAGTAGTCATGAAGATATGGCTTATAAAGACATG
GCGCTAGATCTGGTCATCTTGTTGGAGAAACTTAACCTTCCAACTGTTAG
TTGTATTGGAAGATAGACCTTGATTATGAAGTGCATTGTCACCCAGAAAC
CAACACTCAACTAACACCGGTCGTCATTTCACATGCATTGTATGGCTGCA
AAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACTACATCACTAAAAGA
AAGTCACACCAACTCTCAATTTTGGGGGATTTTCCATGGGTATACAAGCG
ATTCCCAAGTGCAAAGATCCAATACCTACCAGAACTTGATCGCTGGTTAC
ATTTGGAACGTCCTGACAAATTACTGGAAATTTTCGGTGAGTTTTTCATG
GAGAGAGAAGATACGAGCAATGAAAAACGAACAATGTCAATCTCTGGGTG
AGATTTGCGTTTGATGCGTTCCATCTTATTCAGTATAATTCAACGTAACG
ATAAATTGAACTTAACCGTCAACCTCGCCAACGTCCGCAAAAATTATCAA
GATGTGTTGGCGTTCCCGCCCTTCCAACCAGACGTCACTTTTAACGGCCC
ATCACTCTTCATAACTGGTTTCCAGTCCCTTGAAAAGTTGCCATCGTATG
GGCGGTAAAACTTTAATGACACTAGCCTTGACGCAACCAGAACGTTTTGA
ACAAGTGGCCATTATCGACATCGCGCCTAGTGCTGAAGTCCTGATTGAGA
ATACAACCAAGGATTTGGAGAAGCTGGCGAACCTTCAGTTGTACAAATTC
CAATGTAAAGAAGATTTGGAGGCTTATTTGAAAGAGCAACAACTTGTGGT
ATGTTACGACGCTGTGAACCATGGTTGTAGCAGTAGTCATGAAGATATGG
CTTATAAAGACATGGCGCTAGATCTGGTCATCTTGTTGGAGAAACTTAAC
CTTCCAACTGTTAGTTGTATTGGAAGATAGACCTTGATTATGAAGTGCAT
TGTCACCCAGAAACCAACACTCAACTAACACCGGTCGTCATTTCACATGC
ATTGTATGGCTGCAAAAGTGATTGGTCTTCTATTGGTAAAGAACTCAACT
ACATCACTAAAAGAAAGTCACACCAACTCTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043477XLOC_043477Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069823-proteinTCONS_00069823-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069823-exon-scaffold_509-1575043694:93887..93905TCONS_00069823-exon-scaffold_509-1575043694:93887..93905Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1575043694:93496..93640TCONS_00069823-exon-scaffold_509-1575043694:93496..93640Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1575043694:91403..91529TCONS_00069823-exon-scaffold_509-1575043694:91403..91529Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1575043694:90445..90650TCONS_00069823-exon-scaffold_509-1575043694:90445..90650Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1575043694:88212..88399TCONS_00069823-exon-scaffold_509-1575043694:88212..88399Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1575043694:87080..87628TCONS_00069823-exon-scaffold_509-1575043694:87080..87628Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:93887..93905TCONS_00069823-exon-scaffold_509-1510915933:93887..93905Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:93496..93640TCONS_00069823-exon-scaffold_509-1510915933:93496..93640Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:91403..91529TCONS_00069823-exon-scaffold_509-1510915933:91403..91529Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:90445..90650TCONS_00069823-exon-scaffold_509-1510915933:90445..90650Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:88212..88399TCONS_00069823-exon-scaffold_509-1510915933:88212..88399Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1510915933:87080..87628TCONS_00069823-exon-scaffold_509-1510915933:87080..87628Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:93887..93905TCONS_00069823-exon-scaffold_509-1491911889:93887..93905Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:93496..93640TCONS_00069823-exon-scaffold_509-1491911889:93496..93640Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:91403..91529TCONS_00069823-exon-scaffold_509-1491911889:91403..91529Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:90445..90650TCONS_00069823-exon-scaffold_509-1491911889:90445..90650Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:88212..88399TCONS_00069823-exon-scaffold_509-1491911889:88212..88399Clytia hemisphaericaexon
TCONS_00069823-exon-scaffold_509-1491911889:87080..87628TCONS_00069823-exon-scaffold_509-1491911889:87080..87628Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_509supercontigscaffold_509:87080..93905 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.1637	18.2987	25.9126	25.4828	11.2133	10.9107	42.4728	43.5863	33.8938	25.8496	33.7033	44.4234	4.47767	3.23571	2.75987	3.7284	22.5735	29.8864	2.31992	2.43947	63.5992	63.0879	53.5356	67.6315	127.872	101.367	47.809	63.165	36.137	36.7459
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Blast
[Close]
BLAST of TCONS_00069823 vs. Swiss-Prot (Human)
Match: ABHDB (Protein ABHD11 OS=Homo sapiens GN=ABHD11 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.270e-33
Identity = 76/257 (29.57%), Postives = 132/257 (51.36%), Query Frame = 3 
Query:   57 ETNTQLTPVVISHALYGCKSDWSSIGKELNYITKRKVVCYDAVNHGCSSSHEDMAYKDMALDLVILLEKLNLPTVSCIGHRMGGKTLMTLALTQPERFEQVAIIDIAPSAEVLIENTTKDLEKLANL----QLYKFQCKEDLEAYLKEQQLDLRLMRSILFSIIQRNDKLNLTVNLANVRKNYQDVLAFPPFQPDVTFNGPSLFITGFQSLEKFLGDFPWVYKRFPSAKIQYLPELDRWLHLERPDKLLEIFGEFFM 815
            +    L  VV  H L+G K++++SI K L   T R+V+  DA NHG S    DM+Y+ M+ DL  LL +L L     +GH MGGKT M LAL +PE  E++  +DI+P     + +    +  +  +    +L + + ++  +  L     D+ + + +L ++++ + +    VNL  + ++   +LAFP  Q   ++ GP+LF+ G  S        P + + FP A++Q +P    W+H +RP   +     F +
Sbjct:   61 DGEAALPAVVFLHGLFGSKTNFNSIAKILAQQTGRRVLTVDARNHGDSPHSPDMSYEIMSQDLQDLLPQLGLVPCVVVGHSMGGKTAMLLALQRPELVERLIAVDISPVESTGVSHFATYVAAMRAINIADELPRSRARKLADEQLSSVIQDMAVRQHLLTNLVEVDGRFVWRVNLDALTQHLDKILAFP--QRQESYLGPTLFLLGGNSQFVHPSHHPEIMRLFPRAQMQTVPNAGHWIHADRPQDFIAAIRGFLV 315
The following BLAST results are available for this feature:
BLAST of TCONS_00069823 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABHDB3.270e-3329.57Protein ABHD11 OS=Homo sapiens GN=ABHD11 PE=1 SV=1[more]
back to top