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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069776 ID=TCONS_00069776|Name=TCONS_00069776|organism=Clytia hemisphaerica|type=transcript|length=1688bp
ttcaaaataatgcAAGAAACCTCTTGGAGTttaatgcactgtaagggtgc
acacgtttgaaagaaaatgcactgtaagggtaagtttttcagcaaaattt
actgcactgtaagggttgttTTCAGTCTTTAAACCGACTGCTGCATCGTC
TTTTATCATATTTTCAGACGTGCGGTGTTTTAGAATTCTTGGATCTTTGT
TGGTCACAGACGCAGGGGTGTCTCTAGTTTTCCGGATATGTGTAATTATA
AATTGAGCTTTGTTTCGCTTGTTGTATTTAGATATTTACGAATTTTCTGG
TTATTAAagtcatttgaaatattttttccacaTCATTGCGGCTTTTGTTG
ACTTCTTCATTTCGCCTTAAGTACTTTCGttctgaattttattttcatta
atatCTTTGGTGATCTTCCTCTCATCTTCCTATGGGGCAGGTACCAAAAA
ATCTTTCTTGTGGGCGTCCAAAACAAAGcttctttcttgttttcttgCAA
AATGGCCAAATCATTTTAAATGCGTCTTTTTCACTACGTTTGTAATAGTG
GATGTTATTCCTAAGCTTTTTCTGATGTAGCTCATACTGACTGTATATTC
GGTTCACACCATATTGTTCGCAGGCAgtcattttcaaataattttctcag
ATAACAATGATCAATCCGTTATTGATTTATAATTGATTGATTGGAGTTTT
ATAGGTCATTACGAGACCAGACATTTGATCTCAGAGCCGACAAAAGCTGA
AGAAAGCTAACACTATATTTCGTTAAGATGATCCTGGAACTATGAGCCAA
GAAAGGTGAACTCGTCTATCTTTTTAACAGTTGGCCCACTGATAATTAta
acatagtataagaaagccgcatACTATGATTATATCATCATAGCTGGGTA
AATTCAATTTACATTTTGCGCATGCAAGTTCAATTTCATTTGTTGATATC
TTTAATAAATCAAAATGTGGCTGCAATCAGAGTGGTGTTCTATGCACAGC
GTAAATTAATTGAAAGACGTTCATCCAACTGCAGTTCTTCTTGTCTATCT
AAGATTTATCCATAAATCCTTCCGCTTTGGCTCGTGTTAATTCTTCTTTA
AGTTTGtatgaacttttttaaaaaggtcCCTAAATTGAAGTAACTCTCAA
AAAGTGGAGTTTCCCATAGTCACATGACAAATAAGCTAATATTctgaatt
tcttttgaaatattttccttgacatgtgaacttgcatccgttttttattt
taagtcaatccaaccattttctgatgactggtaagctttttaaaaaaggt
ctctaaattgaaataactcccaaataggggaatctcccatagtcacgtga
caaccaagctcatattctgaattattttttttgtaatttgttcCTTAGCA
TGTAAACTTGCAttcgtttgttatttgaagtcaatccaaccatttcctga
tgactggtaagcttttgaaaaaggcccctgaaataatttgaatcccgaat
aggggaatttcccatagtcacgtgacaactaagctcatattctgaatttt
tcttATTGAGATATGTTCTCTGGCATGTgtacttgcatccgttttttatt
tgaagtcaatttaaCCATTTACTGACGACTGGCAAACGTTTGAAGACAGG
TACCTGACAttatttgaatcccgaataggggaatttcc Run BLAST on NCBI transcript from alignment at scaffold_507:111316..113003 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069776 ID=TCONS_00069776|Name=TCONS_00069776|organism=Clytia hemisphaerica|type=transcript|length=1688bp|location=Sequence derived from alignment at scaffold_507:111316..113003 (Clytia hemisphaerica)
ggaaattcccctattcgggattcaaataaTGTCAGGTACCTGTCTTCAAA
CGTTTGCCAGTCGTCAGTAAATGGttaaattgacttcaaataaaaaacgg
atgcaagtacACATGCCAGAGAACATATCTCAATaagaaaaattcagaat
atgagcttagttgtcacgtgactatgggaaattcccctattcgggattca
aattatttcaggggcctttttcaaaagcttaccagtcatcaggaaatggt
tggattgacttcaaataacaaacgaaTGCAAGTTTACATGCTAAGgaaca
aattacaaaaaaaataattcagaatatgagcttggttgtcacgtgactat
gggagattcccctatttgggagttatttcaatttagagaccttttttaaa
aagcttaccagtcatcagaaaatggttggattgacttaaaataaaaaacg
gatgcaagttcacatgtcaaggaaaatatttcaaaagaaattcagAATAT
TAGCTTATTTGTCATGTGACTATGGGAAACTCCACTTTTTGAGAGTTACT
TCAATTTAGGgacctttttaaaaaagttcataCAAACTTAAAGAAGAATT
AACACGAGCCAAAGCGGAAGGATTTATGGATAAATCTTAGATAGACAAGA
AGAACTGCAGTTGGATGAACGTCTTTCAATTAATTTACGCTGTGCATAGA
ACACCACTCTGATTGCAGCCACATTTTGATTTATTAAAGATATCAACAAA
TGAAATTGAACTTGCATGCGCAAAATGTAAATTGAATTTACCCAGCTATG
ATGATATAATCATAGTatgcggctttcttatactatgttaTAATTATCAG
TGGGCCAACTGTTAAAAAGATAGACGAGTTCACCTTTCTTGGCTCATAGT
TCCAGGATCATCTTAACGAAATATAGTGTTAGCTTTCTTCAGCTTTTGTC
GGCTCTGAGATCAAATGTCTGGTCTCGTAATGACCTATAAAACTCCAATC
AATCAATTATAAATCAATAACGGATTGATCATTGTTATctgagaaaatta
tttgaaaatgacTGCCTGCGAACAATATGGTGTGAACCGAATATACAGTC
AGTATGAGCTACATCAGAAAAAGCTTAGGAATAACATCCACTATTACAAA
CGTAGTGAAAAAGACGCATTTAAAATGATTTGGCCATTTTGcaagaaaac
aagaaagaagCTTTGTTTTGGACGCCCACAAGAAAGATTTTTTGGTACCT
GCCCCATAGGAAGATGAGAGGAAGATCACCAAAGatattaatgaaaataa
aattcagaaCGAAAGTACTTAAGGCGAAATGAAGAAGTCAACAAAAGCCG
CAATGAtgtggaaaaaatatttcaaatgactTTAATAACCAGAAAATTCG
TAAATATCTAAATACAACAAGCGAAACAAAGCTCAATTTATAATTACACA
TATCCGGAAAACTAGAGACACCCCTGCGTCTGTGACCAACAAAGATCCAA
GAATTCTAAAACACCGCACGTCTGAAAATATGATAAAAGACGATGCAGCA
GTCGGTTTAAAGACTGAAaacaacccttacagtgcagtaaattttgctga
aaaacttacccttacagtgcattttctttcaaacgtgtgcacccttacag
tgcattaaACTCCAAGAGGTTTCTTgcattattttgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069776-exon-scaffold_507-1491911889:111316..113003 | TCONS_00069776-exon-scaffold_507-1491911889:111316..113003 | Clytia hemisphaerica | exon |
| TCONS_00069776-exon-scaffold_507-1510915933:111316..113003 | TCONS_00069776-exon-scaffold_507-1510915933:111316..113003 | Clytia hemisphaerica | exon |
| TCONS_00069776-exon-scaffold_507-1575043694:111316..113003 | TCONS_00069776-exon-scaffold_507-1575043694:111316..113003 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_507 | supercontig | scaffold_507:111316..113003 . |
Blast
The following BLAST results are available for this feature:
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