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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069746 ID=TCONS_00069746|Name=TCONS_00069746|organism=Clytia hemisphaerica|type=transcript|length=1190bp
cgttttctgactcttcaaggactatactttcatgatcaaaagaaaaaatg
actatacgccgatgcgcatacgagacctaactcagcccctagagtaaaac
aaaaacattaacaaaaatacgttttaattgataattgtattcattatcaa
aaaaaataataatgacTGTCTtataaatatacaaaaaatattctatATTT
AAGTATACTtccaattaaaatatttaatatatgtACAAGATAATAAATct
gtttttatatgaaaaatatgCAACCCTATTAAACTTTCGTTTCAACTATT
TATATTTACATTAGTTTAGTTAATATTTCAGAGCCCAGTGCTTTTAGATT
AAACTCCCATAATTTTTAGAATGCACGACTGTAAATGCTTTAGATTTTGT
TTCAAGACATGAAATTCTCCCATGGCGCATTGCAATTCTCCCATGGTGCA
TTGCATTGATCTTGTGCTTTACTTTTGCGGGCTCTAGTTTGAAAAGTGCT
CTAGAAAATTGTTGTGGCTATCATTCCAATTGAAACAGATATTCAAAATT
ACTGATATTTTCCAATTAATCACTCAACCAATCCAGTCCACTGGTTCCGT
TATATGCTGATTCAGCAATTAAAATACTTTTATCAGGTTCAATTTTGTGT
GGGAGCGAGCTTGCTTTGATACCCAACAAAATATATTTACAAAACTCAAT
TGTAAGTTCTGCCACTTGCTCCAAAAAAACAAGATCACCTCATCTCAAAT
AACTTTGCAATTTCTCCATTATTTTTTACTCGATAGTGCTAAAGAGCCTT
TACTGCTTAAAACACTGCTCGAAGTCTTGCTGCTGCTACCACTTAATGCA
TATGAGTTCCGACTCATTGTTGATTTTGAAGATGACATTGTTAGTACTGA
TGTTTTCGGCGTACTGCTTTCGTTTCTGGAGGTCGTACTTTTACTTAGTG
AAGAAAGTGGTCCTGATCGACTGCTTAAAGACATCGTGCTGAAATCTCAA
AGCCAAACAAAATTAACTGCACAAAATAGCTGCTGCACTTTGAATACACT
CTTTATAAACCAACCGAGTATTATATGTTTTTTCGGTAATAAGTTTATAT
TCTTGTAGGTAGTCGTTGATTTCTAGTGAAGACAAATACTAGGATACTTG
TTTTCTGTTTACTGTCTTCGTTCAGTTATTGCTTTTTGTT Run BLAST on NCBI transcript from alignment at scaffold_506:461331..462520 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069746 ID=TCONS_00069746|Name=TCONS_00069746|organism=Clytia hemisphaerica|type=transcript|length=1190bp|location=Sequence derived from alignment at scaffold_506:461331..462520 (Clytia hemisphaerica)
AACAAAAAGCAATAACTGAACGAAGACAGTAAACAGAAAACAAGTATCCT
AGTATTTGTCTTCACTAGAAATCAACGACTACCTACAAGAATATAAACTT
ATTACCGAAAAAACATATAATACTCGGTTGGTTTATAAAGAGTGTATTCA
AAGTGCAGCAGCTATTTTGTGCAGTTAATTTTGTTTGGCTTTGAGATTTC
AGCACGATGTCTTTAAGCAGTCGATCAGGACCACTTTCTTCACTAAGTAA
AAGTACGACCTCCAGAAACGAAAGCAGTACGCCGAAAACATCAGTACTAA
CAATGTCATCTTCAAAATCAACAATGAGTCGGAACTCATATGCATTAAGT
GGTAGCAGCAGCAAGACTTCGAGCAGTGTTTTAAGCAGTAAAGGCTCTTT
AGCACTATCGAGTAAAAAATAATGGAGAAATTGCAAAGTTATTTGAGATG
AGGTGATCTTGTTTTTTTGGAGCAAGTGGCAGAACTTACAATTGAGTTTT
GTAAATATATTTTGTTGGGTATCAAAGCAAGCTCGCTCCCACACAAAATT
GAACCTGATAAAAGTATTTTAATTGCTGAATCAGCATATAACGGAACCAG
TGGACTGGATTGGTTGAGTGATTAATTGGAAAATATCAGTAATTTTGAAT
ATCTGTTTCAATTGGAATGATAGCCACAACAATTTTCTAGAGCACTTTTC
AAACTAGAGCCCGCAAAAGTAAAGCACAAGATCAATGCAATGCACCATGG
GAGAATTGCAATGCGCCATGGGAGAATTTCATGTCTTGAAACAAAATCTA
AAGCATTTACAGTCGTGCATTCTAAAAATTATGGGAGTTTAATCTAAAAG
CACTGGGCTCTGAAATATTAACTAAACTAATGTAAATATAAATAGTTGAA
ACGAAAGTTTAATAGGGTTGcatatttttcatataaaaacagATTTATTA
TCTTGTacatatattaaatattttaattggaAGTATACTTAAATatagaa
tattttttgtatatttataAGACAgtcattattattttttttgataatga
atacaattatcaattaaaacgtatttttgttaatgtttttgttttactct
aggggctgagttaggtctcgtatgcgcatcggcgtatagtcattttttct
tttgatcatgaaagtatagtccttgaagagtcagaaaacg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069746-exon-scaffold_506-1491911889:461331..462520 | TCONS_00069746-exon-scaffold_506-1491911889:461331..462520 | Clytia hemisphaerica | exon |
| TCONS_00069746-exon-scaffold_506-1510915933:461331..462520 | TCONS_00069746-exon-scaffold_506-1510915933:461331..462520 | Clytia hemisphaerica | exon |
| TCONS_00069746-exon-scaffold_506-1575043694:461331..462520 | TCONS_00069746-exon-scaffold_506-1575043694:461331..462520 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_506 | supercontig | scaffold_506:461331..462520 . |
Blast
The following BLAST results are available for this feature:
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