TCONS_00069732 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069732
Unique NameTCONS_00069732
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069732 ID=TCONS_00069732|Name=TCONS_00069732|organism=Clytia hemisphaerica|type=transcript|length=3088bp
AGGATCCAAATTATCCTTCGAAGAATTTGCTCAAATCCGGAAAATGGTTA
TGTGATAGAAACAATCCTCATCAATCGGCTGAAGTTGAAATATCTTTTTC
AAGAGCAACAACAATTCACTTCATTGATATAGGGAACAGTGGTAGCTGTT
ATGTAGATATCTTAGTACGTCATTCTCTGAAAGGAAATGACTTCAAAAGT
CTAATACCAACTTTCACATTCATGTCCGTGCCAGAAAGTAAATCAGGGGA
AAATAAATGTAAAGTTGAAATGTTCAAACAAgACAGAATGATGGCTGATG
TCAGAGATGAAAAATGGGATGTCCTGAAGATAGTGTGCCGCCAACCATAC
AAACCCAATGCTCAATATGGCATCAGCTTTGTTAATGTAAGGGGATGTAG
TTCTGGAACTAATCAAGcaaaagatgtaaaagcaaagcCTCCTCAACCGT
CAAATCAATCTGCACTAAATTCGTTTTTCGGATTTAATAACACTGGTCTG
GTCTCCCCAAAGCCTGGAAAAACACTGGcattaaaatctaaatcacCTAT
ACTGAAATCACCTCATCAAGTTATGTTGACAAAGACAAAAGtTACAAATG
AAATTCAAGAAAGCCCAACCAAATATTCGTCAGAAAAGTTGAAGttccTC
AATGATGCAGAAGAGTTTTTGTATAGAGCTGGTTTTGATGAAGCCATCAA
ATTGGGGAAGCCAATCCTAATGGCAGAATACAGagaaatgattgaaaaag
aacGAGGACAAAAATTGTCAAGGCAGCAAAAGAAACTTCTTGTATATatt
GCTActgaaatgaagaaaactttaCAAGCAGAGAAAAACAATGCTAAGAT
TTCATCAACTCCACCAAATATGAATAGTCTTGAACGtgaatgtacaaaat
gtgaagtCAGtttttcaattGAAGTTATGGAAATCCATGAGCAAATTTGT
ACAGCAACTCCCAGGACTAAACCAAGACAAAATCGAAAATCCATATGTTT
TGATTATACCATGTCAGATGAGGATAAATCAATACAAAGTTTCAATAAAA
GAAAACCATCAATGTCCACAAAATTAACATCTGCTGGTGAAACTTCTGCT
TCATCAGCATCCTCTAGCCCTGAATCTCGTTGGTATGGTAAAACAATACC
TAAAAGCTCTGGATCAAATATTACAACAACACCAAAAAGCTCAGGCTCTA
CAGCTACAATAACATTGAAATCCTCCTCAAAACTATTTGCACGTAAACGG
TCAGGATCTACTAGTAAAGCAGCTAAAGCTAAATTACCGGAACCTGTTAA
TTTACCAATTATAGATACACATGTGTCCAAAACATCATCCTTAAGCAGTA
CAAAAACTGGACGTGATTCTCCAATCTCAAAGAAGCTATTTCTCGATCAC
AACCAAAACGAAAATGTAAAATCTAATAACAATAGTGATGATTTCTTTNT
CTACAGCTACAATAACATTGAAATCCTCCTCAAAACTATTTGCACGTAAA
CGGTCAGGATCTACTAGTAAGGCAGCTAAAGCTAAATTACCGGAACCTGT
TAATTTACCAATTATCAATACACATGCGTCCAAAACATCATCCTTAAGCA
GTACAAAAACTGGACGTGATTCTCCAATCTCAAAGAAGCTATTTCTCGAT
CACAACCAAAACGAAAATGTAAAATCTAATAACAATAGTGATGATTTCTT
TGATGACATGAATCTCAGTGACTTTGAGGATGATACTACTAATAACGATG
ATGATTTAGTTGTTACAAAAGACACAAATTTCAAAAGGGACAATTTTCAG
AACTCTATTTCTATAaatgatgatgacgatgataTCATAATTTCCAAAGA
AAAGAATAACTCACATAATACACAATATGTTGAATGCCCAATGTGTTTTG
AACTCATGAGTACCACTATTATTGAACTACATGCTTCTACGTGTAATGGA
AAAACAGAGACAACaccacaaactttcaataataaaCCAAGCTCAAATGC
ATTTGCAGCTACTCCATATCTTTCAAGTGTCAATAGACAAGCAAACAAGA
TGGGTTCTAATGCATCTACAGTGAGTCCGAATCTTTCAACAACTAACGGT
TCATTGGAGAATCACCAACACCAAGGCGATACTCAAGAATGTCCTGTCTG
TAACAAACAAATCAATAAATATAAAATTGCTGTCCATGTTGTTTTGTGTA
CTGGTAAGGGTCTGGATAATGATAAAGAAGATGATGACCTACCATCCATT
TTCAACAGAAAATCTTCTAGTACTTCCGCAACGAAAACAAAGACTTCTAA
AAAGTCTTCTTCTACTAATGCTAGTCCCTCCCCTTCAGGGGCTCATAATG
TGATGAGTGTTATGCACAAGCCTTCAGGGAGCCACAATGCAATGAACACT
TTCCAAAATACAAACAACACTGGTGCCAGTTATAATCCTTCGGGAGCTCA
TAATACACCAACTAATAGTATACTAGTTCCTGACCATGATTATGGGAAAA
GAGAGGAAGCTTCTTGTCCCATATGCTCAATAACATTGGATAAGAGTATG
ATTGAAGTACACGTTAATATGTGTTTAGACAGATTGCAATGAAGCTGTTT
GAATTCAGATATTTAAGTTGTATTTAAAGGGGTTATCAGATGATTCTTga
tatttggcttagagataccttttgacctattttttttccaaagctgagat
acttgactttgaaatttctaaaaataagtctttacacagtctttacgttg
aatttctattattttcaagtcaaaattttaaaattcagagtcgaatatct
cagctttggaaaataattgggtcataaactttggaggtgtttcttaggac
cataaaaggtatctctaagccaaatataaaaaatcatctgataatccctt
taaaGTTGACTTTTGATCTCAATGCAAGATGACATTACATAATTTTCTAA
TAATTACTGAGATGCTATTTGGCTTTGTCATAATTTGACTATGTTGACTA
TTTGAATAATGCAATAAGAGGTCATTTTGGATTTTGATATTCTTGAAata
cattatatatttttatcttatttgAGTCAAACCTTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_506:468427..475294-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069732 ID=TCONS_00069732|Name=TCONS_00069732|organism=Clytia hemisphaerica|type=transcript|length=6868bp|location=Sequence derived from alignment at scaffold_506:468427..475294- (Clytia hemisphaerica)
AGGATCCAAATTATCCTTCGAAGAATTTGCTCAAATCCGGAAAATGGTTA
TGTGATAGAAACAATCCTCATCAATCGGCTGAAGTTGAAATATCTTTTTC
AAGAGCAACAACAATTCACTTCATTGATATAGGTAAGATGACTTGCACAT
TAGACAAGGTGGAACTTTTCACATTGTTTTTTTTAAATGGCAGAAAGGTA
ACAACTGGCTTTGTTTAACACTGAAATATTTCAAAACACTCCTGAACATT
CTCTCAAGCTTTGGACAAAAACTAAATGTTATTCTGATCGAGTATTTGAA
AATTTATTTTAATCTATTTATAGGGAACAGTGGTAGCTGTTATGTAGATA
TCTTAGTACGTCATTCTCTGAAAGGAAATGACTTCAAAAGTCTAATACCA
ACTTTCACATTCATGTCCGTGCCAGAAAGTAAATCAGGGGAAAATAAATG
TAAAGTTGAAATGTTCAAACAAGGTAAATTAGATTTTTTTATCAATGTTT
TAATCAGATCTTACATTTAGGATAAAGATCCTATCTGTTTATTCTCTCAA
TGTTTTTCCCTTAGAATCAAAGTCATCTTGTTTTCTCAGTTATATTTTTG
TATTTTTATTTTTCTGTGACAACGTGCCTTTTCTCAAATTACTAAGAATT
TGTGGTAATAAAGCCTTTTTAGTGGAAAAAGAACCTGTTTTTGCCAACAA
CTAGATATTTTTGAAAATATGACCTGGAAAAAAAAAATTTAAAAGTCTAT
AATTAATAAATTTTAGACAGAATGATGGCTGATGTCAGAGATGAAAAATG
GGATGTCCTGAAGATAGTGTGCCGCCAACCATACAAACCCAATGCTCAAT
ATGGCATCAGCTTTGTTAATGTAAGGGGATGTAGTTCTGGAACTAATCAA
GCAAAAGATGTAAAAGCAAAGCCTCCTCAACCGTCAAATCAATCTGCACT
AAATTCGTTTTTCGGATTTAATAACACTGGGTGAGTTTTCTGATTCAATT
TAATTGATTCAACAATTTTTCATCTGTGATGATCATAAAGAAGCTTGCTT
CACTTTGCTGTATCTTTATAATGATGTCTTTTTTTTGCTCATTGGCAATT
ATTCTAGACACGAGATAATGCTCAAAGATTTAAAGCATAATAACTTGTAA
ATGAATGGTGTTTTTCTTGTCTGAAAAGCAGTTATTATTCTATGTGAAAC
AAGAAATTTAGTTATTATTTTAAACTAAACCAGTTATCATCTTTTTCCTT
GTTATTTAAGTCTGGTCTCCCCAAAGCCTGGAAAAACACTGGCATTAAAA
TCTAAATCACCTATACTGAAATCACCTCATCAAGTTATGTTGACAAAGAC
AAAAGGTTTGTTTATTGAAATTATTCTTCAGCATAGTTTTCATGGTTCTT
TATTATTTTTTTAAATACTTGAATTTAAATTTCGCACACAATTCCTGATG
CATAAACTGTATAACATTTTTTTATCATTTAGTTACAAATGAAATTCAAG
AAAGCCCAACCAAATATTCGTCAGAAAAGTTGAAGGTTTGTTTATTACTT
TCTTATCCTTTGTTCACTTCTTGTATACTTTTTGGGGTTCTAGGAAAACT
GCCCCCGAGAAAATTGCCCCCCGGAAAACTGCCCCCGGAAAATTGCCCCC
TAGAAAATTGCCCCCTAGGAAAATTGCCCCCTAGGAAAATTGCCCCCTAG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTGCTTGAAATCTTACACCCTCTTCTCACAGACCCGGTAGGA
TTTTTTTAGCCAGTGGGGATAAAAATAACGGACTGAAAGTCGATATTCCT
TTATTTTTTATGGCTGGGGAAAAATCAGAAAATTCAATGGCCATTTGAAG
TTTCATTGGATTTTATAAAAAAGTGGAAAAAAAGATGGCGGTGGGGGGTA
GCAATTTTCTAGGGGGCAATTTTCCTAGGGGGCAATTTTCCGGGGGGCAG
TTTACCGGGGGGCAGTTTTCTCGGGGGCAATTTTCCTGACACCACTTTTT
GGACCTACCTGGAGGTCCTTTAATTTGACTGTTGTCCGTCCGTCCGTTCG
TCTGTTACAAGCTTTTTTGGGACTGGCTCATTAGTTTTTTTCATTTTTAG
CACAGTAATGCAAAATAGCAATGCCTAAAAGGTGACGGAGCCTGATTTTT
GAGAAAAAAAAATTGGGGGCAAATTTGGGCCAAAACTGCCTAAAAATAGG
GTTTTTTGGATTTTGTGCAAAATTGCTTCATTAGTTTTTCCTGATATTTG
GCAGAAAGATAGAGTGCTAGGTGGCCTAAATTGCGGCTGATGTGATTTTT
CCCTTTAGTCGTTTTGAGGGAAAATGGCGATTGGCATGGTAATAGAAAAA
AATGATTCTAATTTTTTTTACATAAAGATAGAGGGAAAGGTTTTCCATAA
TTTTTTTCTTGCAGTAAAATTCTGATTTTCTTATGTTGAAACAAAAATAC
CCTTCAGTAAATTTATGGGGAAATGAGTATTTCTCGCGATTGGCTTGGTA
TTATTTTCTGAATTTTAGTTTGTCTGACTATTGTTGCCATTATTCTATTT
TTTTTATTACACTATAGCCTTTAGGTAGGTCCATTCAGCATGTAGCTTGT
TTTTCGTTTATTCCTTAATGAATAGAATCAACAGAAATATTGAAAAATGA
AGACATCATGAAATACTAGGTTGATTTTAATATTTTTGTATAATAATTGA
GCAAACTTTCAATATTACAATTTTAGTTCCTCAATGATGCAGAAGAGTTT
TTGTATAGAGCTGGTTTTGATGAAGCCATCAAATTGGGGAAGCCAATCCT
AATGGCAGGTACACCAAATTTCATGAACTGTTATACTTCGAAAATTACTC
AAACTAGATTATTATTTTATTCTTGCAGAAAAAAATTCATAAAGATTAAT
GCAATGCTACTTTCTGATAACACCCAGTAACACCTACCTTTTATACATAC
CCCAGCTGGCACACAACGTTCTTTTAACGTTTATCTAACGTTCACAACGT
CCATGTAATGTTAGATGAACGTTGAAACAACATTGTTTGCCAACTGGGAC
TTAAGATCAGATTTTTCTTGGAATGACTGTTTTTAACCAAAATTGTTATT
CTCTTTAGAATACAGAGAAATGATTGAAAAAGAACGAGGACAAAAATTGT
CAAGGCAGCAAAAGAAACTTCTTGTATATGTAGGTATTACTTATTTACAT
CTTGCTCCTGTCTTATTGATAAACAATCAGATTTTCACTAATCCAATTTT
TCTTCTTTAGATTGCTACTGAAATGAAGAAAACTTTACAAGCAGAGAAAA
ACAATGCTAAGGTAATGTTTTAGAATAATAAGTTTTTACGATTTTTTTCG
TTAAAAAGTAAATGAATGTAAAGGTCAACCCTCTTTGATTCACACCTCTA
CTATTCAAATCAATCTTCTTAATAGAAAATCAGCCCAAATTTGAGTCCTG
TCATAATTTAAAAAAAATTTGCTTCGTGAAGTTTGAATTAGAGAAAGTCA
ACTGTAACAGCAAAGATATAAAGGGCTGAGAATGACAAACCATTTCATTG
GTGGTCATTTTGAGTGTATCATACAGAAAAATCTCTTTCTACAGAATTCT
TTATGTTTCCTCTCTTCTCGGGTAAAAAAATCACTTTTCGTTAGAATTCT
GACTTTGGCTGATTAATAAGCATGAATTACACGCCATTGTAGAGTACCTT
TAGGGAAGAAATTTTTGCGGAATTAAATTTTGCGGTTTTTTGACAAATCC
GTAAAATTAAATTCCATGAAACACAAATAATCTAGATTTAAAAAATCACC
TCTAAAATATGCCATTTTGTAAACAAAACATTCTCTCAACTGCAAAATTA
AATTCAACGAAACGAAATTTTGAGCTGTGAATCACGAAAATTTCTTCCCC
CAAAAATTTCTTCTCGTATACTATAAATGTACTTTTAATTATGTTTTCAG
ATTTCATCAACTCCACCAAATATGAATAGTCTTGAACGTGAATGTACAAA
ATGTGAAGTCAGGTAGTATATAAATTATTTCAGAAACTCAAAATAAAATT
TAAAAAATTCAGTATTTAAGGATTCACTTTATTAAACACACTTTAGGAGG
ACTTAAAAATTGAGCTTGCATATGTTTAACAGAATAACTTTTTTATAGTA
AGTCAAACCTATTTTTCAATCAAAAAAACGAATCTCAGGTAAATAAAAAC
TGCACCTCCGACAATTAGCCCTTAGAATGACTAAATTGTGCAAAACAGTA
AGGAAATTAAGTTAATCTTTAATTATTTTACTTTTTTTAGTTTTTCAATT
GAAGTTATGGAAATCCATGAGCAAATTTGTACAGCAACTCCCAGGACTAA
ACCAAGACAAAATCGAAAATCCATATGTTTTGATTATACCATGTCAGATG
AGGATAAATCAATACAAAGTTTCAATAAAAGAAAACCATCAATGTCCACA
AAATTAACATCTGCTGGTGAAACTTCTGCTTCATCAGCATCCTCTAGCCC
TGAATCTCGTTGGTATGGTAAAACAATACCTAAAAGCTCTGGATCAAATA
TTACAACAACACCAAAAAGCTCAGGCTCTACAGCTACAATAACATTGAAA
TCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTAAAGC
AGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATAGATACAC
ATGTGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGATTCT
CCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATGTAAA
ATCTAATAACAATAGTGATGATTTCTTTNTCTACAGCTACAATAACATTG
AAATCCTCCTCAAAACTATTTGCACGTAAACGGTCAGGATCTACTAGTAA
GGCAGCTAAAGCTAAATTACCGGAACCTGTTAATTTACCAATTATCAATA
CACATGCGTCCAAAACATCATCCTTAAGCAGTACAAAAACTGGACGTGAT
TCTCCAATCTCAAAGAAGCTATTTCTCGATCACAACCAAAACGAAAATGT
AAAATCTAATAACAATAGTGATGATTTCTTTGATGACATGAATCTCAGTG
ACTTTGAGGATGATACTACTAATAACGATGATGATTTAGTTGTTACAAAA
GACACAAATTTCAAAAGGGACAATTTTCAGAACTCTATTTCTATAAATGA
TGATGACGATGATATCATAATTTCCAAAGAAAAGAATAACTCACATAATA
CACAATATGTTGAATGCCCAATGTGTTTTGAACTCATGAGTACCACTATT
ATTGAACTACATGCTTCTACGTGTAATGGAAAAACAGAGACAACACCACA
AACTTTCAATAATAAACCAAGCTCAAATGCATTTGCAGCTACTCCATATC
TTTCAAGTGTCAATAGACAAGCAAACAAGATGGGTTCTAATGCATCTACA
GTGAGTCCGAATCTTTCAACAACTAACGGTTCATTGGAGAATCACCAACA
CCAAGGCGATACTCAAGAATGTCCTGTCTGTAACAAACAAATCAATAAAT
ATAAAATTGCTGTCCATGTTGTTTTGTGTACTGGTAAGGGTCTGGATAAT
GATAAAGAAGATGATGACCTACCATCCATTTTCAACAGAAAATCTTCTAG
TACTTCCGCAACGAAAACAAAGACTTCTAAAAAGTCTTCTTCTACTAATG
CTAGTCCCTCCCCTTCAGGGGCTCATAATGTGATGAGTGTTATGCACAAG
CCTTCAGGGAGCCACAATGCAATGAACACTTTCCAAAATACAAACAACAC
TGGTGCCAGTTATAATCCTTCGGGAGCTCATAATACACCAACTAATAGTA
TACTAGTTCCTGACCATGATTATGGGAAAAGAGAGGAAGCTTCTTGTCCC
ATATGCTCAATAACATTGGATAAGAGTATGATTGAAGTACACGTTAATAT
GTGTTTAGACAGATTGCAATGAAGCTGTTTGAATTCAGATATTTAAGTTG
TATTTAAAGGGGTTATCAGATGATTCTTGATATTTGGCTTAGAGATACCT
TTTGACCTATTTTTTTTCCAAAGCTGAGATACTTGACTTTGAAATTTCTA
AAAATAAGTCTTTACACAGTCTTTACGTTGAATTTCTATTATTTTCAAGT
CAAAATTTTAAAATTCAGAGTCGAATATCTCAGCTTTGGAAAATAATTGG
GTCATAAACTTTGGAGGTGTTTCTTAGGACCATAAAAGGTATCTCTAAGC
CAAATATAAAAAATCATCTGATAATCCCTTTAAAGTTGACTTTTGATCTC
AATGCAAGATGACATTACATAATTTTCTAATAATTACTGAGATGCTATTT
GGCTTTGTCATAATTTGACTATGTTGACTATTTGAATAATGCAATAAGAG
GTCATTTTGGATTTTGATATTCTTGAAATACATTATATATTTTTATCTTA
TTTGAGTCAAACCTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043418XLOC_043418Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069732-exon-scaffold_506-1575043694:475163..475294TCONS_00069732-exon-scaffold_506-1575043694:475163..475294Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:474822..474971TCONS_00069732-exon-scaffold_506-1575043694:474822..474971Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:474315..474528TCONS_00069732-exon-scaffold_506-1575043694:474315..474528Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:473940..474034TCONS_00069732-exon-scaffold_506-1575043694:473940..474034Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:473760..473812TCONS_00069732-exon-scaffold_506-1575043694:473760..473812Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:472087..472168TCONS_00069732-exon-scaffold_506-1575043694:472087..472168Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:471716..471786TCONS_00069732-exon-scaffold_506-1575043694:471716..471786Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:471584..471634TCONS_00069732-exon-scaffold_506-1575043694:471584..471634Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:470883..470944TCONS_00069732-exon-scaffold_506-1575043694:470883..470944Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1575043694:468427..470604TCONS_00069732-exon-scaffold_506-1575043694:468427..470604Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:475163..475294TCONS_00069732-exon-scaffold_506-1510915933:475163..475294Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:474822..474971TCONS_00069732-exon-scaffold_506-1510915933:474822..474971Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:474315..474528TCONS_00069732-exon-scaffold_506-1510915933:474315..474528Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:473940..474034TCONS_00069732-exon-scaffold_506-1510915933:473940..474034Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:473760..473812TCONS_00069732-exon-scaffold_506-1510915933:473760..473812Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:472087..472168TCONS_00069732-exon-scaffold_506-1510915933:472087..472168Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:471716..471786TCONS_00069732-exon-scaffold_506-1510915933:471716..471786Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:471584..471634TCONS_00069732-exon-scaffold_506-1510915933:471584..471634Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:470883..470944TCONS_00069732-exon-scaffold_506-1510915933:470883..470944Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1510915933:468427..470604TCONS_00069732-exon-scaffold_506-1510915933:468427..470604Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:475163..475294TCONS_00069732-exon-scaffold_506-1491911889:475163..475294Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:474822..474971TCONS_00069732-exon-scaffold_506-1491911889:474822..474971Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:474315..474528TCONS_00069732-exon-scaffold_506-1491911889:474315..474528Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:473940..474034TCONS_00069732-exon-scaffold_506-1491911889:473940..474034Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:473760..473812TCONS_00069732-exon-scaffold_506-1491911889:473760..473812Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:472087..472168TCONS_00069732-exon-scaffold_506-1491911889:472087..472168Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:471716..471786TCONS_00069732-exon-scaffold_506-1491911889:471716..471786Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:471584..471634TCONS_00069732-exon-scaffold_506-1491911889:471584..471634Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:470883..470944TCONS_00069732-exon-scaffold_506-1491911889:470883..470944Clytia hemisphaericaexon
TCONS_00069732-exon-scaffold_506-1491911889:468427..470604TCONS_00069732-exon-scaffold_506-1491911889:468427..470604Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:468427..475294 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34951	0.106216	0.290034	0.141877	1.05747	0.624747	0.804761	1.22851	0.938417	0.821482	0.532971	0.464305	0.364418	0.35789	0.600256	0.914853	0.898965	0.780323	0.115321	0.351426	0.344445	0.814108	0.333661	0.706205	1.11985	1.40845	0.175621	0.337726	0.382652	0.763728
Blast
[Close]
BLAST of TCONS_00069732 vs. Swiss-Prot (Human)
Match: XRCC1 (DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 5.384e-20
Identity = 49/133 (36.84%), Postives = 79/133 (59.40%), Query Frame = 3 
Query:    3 DPNYPSKNLLKSG---KWLCDRNNPHQSAEVEISFSRATTIHFIDIGNSGSCYVDILVRHSLKG---NDFKSLIPTFTFMSVPESKSGENKCKVEMFKQDRMMADVRDEKWDVLKIVCRQPYKPNAQYGISFV 383
            D  + ++NLLK+    KW   +    ++  V +   +   IH +DIGN GS +V++LV  S  G    D++ L+ T +FMS  ES+SG N  +V MF  D+++    +++WD +KIVC QPY  ++ +G+SFV
Sbjct:   16 DSTHCAENLLKADTYRKWRAAKAG-EKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFV 147
The following BLAST results are available for this feature:
BLAST of TCONS_00069732 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
XRCC15.384e-2036.84DNA repair protein XRCC1 OS=Homo sapiens GN=XRCC1 ... [more]
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