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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069687 ID=TCONS_00069687|Name=TCONS_00069687|organism=Clytia hemisphaerica|type=transcript|length=1473bp
ATAGATTCAATATCACGTGGTAGCGCTCAAAGATACATGAATAAAACGTA
CACAATGCTTCAAAATGACCCAAATTCTGTTATAATGAAGGGGCACACTA
TAAATGGTGACGGGACAACAGCACAAATTCTGGCCATGTTGATTGGTCAA
CTCGAACATGAACTTCCCGAGGCTCGACGTTCATTTCCTAATGCTACCTA
TGTGGATGAATGGcctttcattttcaagaaatatgaaaaaaaccgTGGCT
ACACAACCCTGTTGTCAGAAGATTACCCAAACATGAGTATCTTTAACTAT
CGTCTGAAAGGATTCGACAAGCAACCAACCAGCAAATATTTGCGGACGTG
GTGGAAAGCAGCTAatgaaatgattgaaaaagcGAATAAAGTTACTACTA
AATGTAACCATGAGTTTGCGTATCagtatttgaaagattttttaaaggtc
TATAGGCGCGAGAAGAAATTTGTGTTCAATGTTGCCAATGTTGCTCATAA
TTATCCACAGAAATCAGTAATGGTTGATAATGATCTTTATCAAATGTATC
AAGAGATGAATCAAACAGGACAATTAAATCGTAGCCTCGTTTTCGTTTTT
GGTGACCATGGTGACAGAGCTTCAGAATTCCGTCGTACTTTGCATGGAAA
ATTAGAAGAGAGATTACCTTTTATGAGCCTTNTTTGGTGACCATGGTGAC
AGAGCTTCAGAATTCCGTCGTACTTTGCACGGAAAATTAGAAGAGAGATT
ACCTTTAATGAGCCTCACACTGCCAACGTggttcaaacaaaaacattcga
aattattttcaaatttgcaatCGAACTCGAAAGTTTTGACAACACATTAC
GATATATACGCTACTTTGAATCACGTTTTAAACCAGTTCAAAATGGCACC
AACACATAAGTATGGGCGGAGCTTATTTACTGGTATAACACCACTCAATC
GAACATGCGCACAAGCGGGGATTGACAGTCATTGGTGCCCTTGTTTAACA
TATACTAAACTAGATACCAACGATCCTATGGTGAGAAAAGTAGCAATCAA
ATCTGTACGCTACATCAACAAACTGGTCTCAAAAGATGAAAAACCACGTC
GCTCGTGCGCACAActgaaattattaaaaattgagCGCGCGGCCGAACAA
GTCGTAAATAAGGATGTTGTCGAATTTACACAAACCAAAGAGAACTCTCA
ATGCGATGAATGTGGATTTGTCAAAGATAAAGGATTCAAATTTCACAAGA
AGTTATTAGAAATTGTATTAACTGTCAGCCCTAGTAATGGTCAATATGAG
ATCAGTGTTGCGTATAATACAAAGACTGGGAAAATAACTACTGGTTCAAT
AAGTAGAATCAACTTGTATGGAAAgcaaccagaatgcattgcaagGGAAT
ATCCCTATCTTAGAAAATATTGTTATTGtaaataaatctattttgaatGC
AGATGAAATCcttaaattttgat Run BLAST on NCBI protein sequence of TCONS_00069687-protein >TCONS_00069687-protein ID=TCONS_00069687-protein|Name=TCONS_00069687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
IDSISRGSAQRYMNKTYTMLQNDPNSVIMKGHTINGDGTTAQILAMLIGQ
LEHELPEARRSFPNATYVDEWPFIFKKYEKNRGYTTLLSEDYPNMSIFNY
RLKGFDKQPTSKYLRTWWKAANEMIEKANKVTTKCNHEFAYQYLKDFLKV
YRREKKFVFNVANVAHNYPQKSVMVDNDLYQMYQEMNQTGQLNRSLVFVF
GDHGDRASEFRRTLHGKLEERLPFMSLXW Run BLAST on NCBI transcript from alignment at scaffold_506:110424..112251+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069687 ID=TCONS_00069687|Name=TCONS_00069687|organism=Clytia hemisphaerica|type=transcript|length=1828bp|location=Sequence derived from alignment at scaffold_506:110424..112251+ (Clytia hemisphaerica)
ATAGATTCAATATCACGTGGTAGCGCTCAAAGATACATGAATAAAACGTA
CACAATGCTTCAAAATGACCCAAATTCTGTTATAATGAAGGTACGCTTGT
TCTTTTGACCAAAAAACCTCACAATGTTTGTAAAGAGAGCCTTTGAAGCC
CTCTAATCCTACTTATTGTCCATAAGACTCCTGTACAGAAAGATTTCTCA
ATAAAATAAGCAGACTTAACATGAGTTGATGTTTAAGACGTTCATCTTCT
GCGTAAACCTGGATACCTCTTATTCTAAAAACCTGCGTTTTGAATGACTG
GCCTATGAAAAGCGGATGACTGAGAACTATAGTACGAGTTTAACCCAGAA
AGATAGGGATATTTTACAAGGGgtttttgtcaactttcagtCAAGTAGAT
TCATCAagatttttgattaaaaacctataaaatttatttcaacaGGGGCA
CACTATAAATGGTGACGGGACAACAGCACAAATTCTGGCCATGTTGATTG
GTCAACTCGAACATGAACTTCCCGAGGCTCGACGTTCATTTCCTAATGCT
ACCTATGTGGATGAATGGcctttcattttcaagaaatatgaaaaaaaccg
TGGCTACACAACCCTGTTGTCAGAAGATTACCCAAACATGAGTATCTTTA
ACTATCGTCTGAAAGGATTCGACAAGCAACCAACCAGCAAATATTTGCGG
ACGTGGTGGAAAGCAGCTAatgaaatgattgaaaaagcGAATAAAGTTAC
TACTAAATGTAACCATGAGTTTGCGTATCagtatttgaaagattttttaa
aggtcTATAGGCGCGAGAAGAAATTTGTGTTCAATGTTGCCAATGTTGCT
CATAATTATCCACAGAAATCAGTAATGGTTGATAATGATCTTTATCAAAT
GTATCAAGAGATGAATCAAACAGGACAATTAAATCGTAGCCTCGTTTTCG
TTTTTGGTGACCATGGTGACAGAGCTTCAGAATTCCGTCGTACTTTGCAT
GGAAAATTAGAAGAGAGATTACCTTTTATGAGCCTTNTTTGGTGACCATG
GTGACAGAGCTTCAGAATTCCGTCGTACTTTGCACGGAAAATTAGAAGAG
AGATTACCTTTAATGAGCCTCACACTGCCAACGTggttcaaacaaaaaca
ttcgaaattattttcaaatttgcaatCGAACTCGAAAGTTTTGACAACAC
ATTACGATATATACGCTACTTTGAATCACGTTTTAAACCAGTTCAAAATG
GCACCAACACATAAGTATGGGCGGAGCTTATTTACTGGTATAACACCACT
CAATCGAACATGCGCACAAGCGGGGATTGACAGTCATTGGTGCCCTTGTT
TAACATATACTAAACTAGATACCAACGATCCTATGGTGAGAAAAGTAGCA
ATCAAATCTGTACGCTACATCAACAAACTGGTCTCAAAAGATGAAAAACC
ACGTCGCTCGTGCGCACAActgaaattattaaaaattgagCGCGCGGCCG
AACAAGTCGTAAATAAGGATGTTGTCGAATTTACACAAACCAAAGAGAAC
TCTCAATGCGATGAATGTGGATTTGTCAAAGATAAAGGATTCAAATTTCA
CAAGAAGTTATTAGAAATTGTATTAACTGTCAGCCCTAGTAATGGTCAAT
ATGAGATCAGTGTTGCGTATAATACAAAGACTGGGAAAATAACTACTGGT
TCAATAAGTAGAATCAACTTGTATGGAAAgcaaccagaatgcattgcaag
GGAATATCCCTATCTTAGAAAATATTGTTATTGtaaataaatctattttg
aatGCAGATGAAATCcttaaattttgat Coding sequence (CDS) from alignment at scaffold_506:110424..112251+ >TCONS_00069687 ID=TCONS_00069687|Name=TCONS_00069687|organism=Clytia hemisphaerica|type=CDS|length=1380bp|location=Sequence derived from alignment at scaffold_506:110424..112251+ (Clytia hemisphaerica)
ATAGATTCAATATCACGTGGTAGCGCTCAAAGATACATGAATAAAACGTA
CACAATGCTTCAAAATGACCCAAATTCTGTTATAATGAAGGGGCACACTA
TAAATGGTGACGGGACAACAGCACAAATTCTGGCCATGTTGATTGGTCAA
CTCGAACATGAACTTCCCGAGGCTCGACGTTCATTTCCTAATGCTACCTA
TGTGGATGAATGGcctttcattttcaagaaatatgaaaaaaaccgTGGCT
ACACAACCCTGTTGTCAGAAGATTACCCAAACATGAGTATCTTTAACTAT
CGTCTGAAAGGATTCGACAAGCAACCAACCAGCAAATATTTGCGGACGTG
GTGGAAAGCAGCTAatgaaatgattgaaaaagcGAATAAAGTTACTACTA
AATGTAACCATGAGTTTGCGTATCagtatttgaaagattttttaaaggtc
TATAGGCGCGAGAAGAAATTTGTGTTCAATGTTGCCAATGTTGCTCATAA
TTATCCACAGAAATCAGTAATGGTTGATAATGATCTTTATCAAATGTATC
AAGAGATGAATCAAACAGGACAATTAAATCGTAGCCTCGTTTTCGTTTTT
GGTGACCATGGTGACAGAGCTTCAGAATTCCGTCGTACTTTGCATGGAAA
ATTAGAAGAGAGATTACCTTTTATGAGCCTTNTTTGGTGAATAGATTCAA
TATCACGTGGTAGCGCTCAAAGATACATGAATAAAACGTACACAATGCTT
CAAAATGACCCAAATTCTGTTATAATGAAGGGGCACACTATAAATGGTGA
CGGGACAACAGCACAAATTCTGGCCATGTTGATTGGTCAACTCGAACATG
AACTTCCCGAGGCTCGACGTTCATTTCCTAATGCTACCTATGTGGATGAA
TGGcctttcattttcaagaaatatgaaaaaaaccgTGGCTACACAACCCT
GTTGTCAGAAGATTACCCAAACATGAGTATCTTTAACTATCGTCTGAAAG
GATTCGACAAGCAACCAACCAGCAAATATTTGCGGACGTGGTGGAAAGCA
GCTAatgaaatgattgaaaaagcGAATAAAGTTACTACTAAATGTAACCA
TGAGTTTGCGTATCagtatttgaaagattttttaaaggtcTATAGGCGCG
AGAAGAAATTTGTGTTCAATGTTGCCAATGTTGCTCATAATTATCCACAG
AAATCAGTAATGGTTGATAATGATCTTTATCAAATGTATCAAGAGATGAA
TCAAACAGGACAATTAAATCGTAGCCTCGTTTTCGTTTTTGGTGACCATG
GTGACAGAGCTTCAGAATTCCGTCGTACTTTGCATGGAAAATTAGAAGAG
AGATTACCTTTTATGAGCCTTNTTTGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069687-exon-scaffold_506-1491911889:110424..110513 | TCONS_00069687-exon-scaffold_506-1491911889:110424..110513 | Clytia hemisphaerica | exon |
| TCONS_00069687-exon-scaffold_506-1510915933:110424..110513 | TCONS_00069687-exon-scaffold_506-1510915933:110424..110513 | Clytia hemisphaerica | exon |
| TCONS_00069687-exon-scaffold_506-1575043694:110424..110513 | TCONS_00069687-exon-scaffold_506-1575043694:110424..110513 | Clytia hemisphaerica | exon |
| TCONS_00069687-exon-scaffold_506-1491911889:110869..112251 | TCONS_00069687-exon-scaffold_506-1491911889:110869..112251 | Clytia hemisphaerica | exon |
| TCONS_00069687-exon-scaffold_506-1510915933:110869..112251 | TCONS_00069687-exon-scaffold_506-1510915933:110869..112251 | Clytia hemisphaerica | exon |
| TCONS_00069687-exon-scaffold_506-1575043694:110869..112251 | TCONS_00069687-exon-scaffold_506-1575043694:110869..112251 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_506 | supercontig | scaffold_506:110424..112251 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
The following BLAST results are available for this feature:
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