TCONS_00069685 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069685
Unique NameTCONS_00069685
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length189

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069685 ID=TCONS_00069685|Name=TCONS_00069685|organism=Clytia hemisphaerica|type=transcript|length=189bp
CGTGGAAATATTGGAATAAAATTCAGAATCACTAATCTCCCGTGAAAATA
TACTTACATCTTTACGAACGTTTAGTATGGAATAATAATCAGGGCTGTTT
TCATATTCTTCTTCGGTGTCCGCATCTGgatccgccattttgatttgACC
CCATGCAATTTTCGCTGTGTCAGCAGAAAAAGATTAATA
Run BLAST on NCBI

transcript from alignment at scaffold_505:164375..164563

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069685 ID=TCONS_00069685|Name=TCONS_00069685|organism=Clytia hemisphaerica|type=transcript|length=189bp|location=Sequence derived from alignment at scaffold_505:164375..164563 (Clytia hemisphaerica)
TATTAATCTTTTTCTGCTGACACAGCGAAAATTGCATGGGGTcaaatcaa
aatggcggatcCAGATGCGGACACCGAAGAAGAATATGAAAACAGCCCTG
ATTATTATTCCATACTAAACGTTCGTAAAGATGTAAGTATATTTTCACGG
GAGATTAGTGATTCTGAATTTTATTCCAATATTTCCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043390XLOC_043390Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069685-exon-scaffold_505-1491911889:164375..164563TCONS_00069685-exon-scaffold_505-1491911889:164375..164563Clytia hemisphaericaexon
TCONS_00069685-exon-scaffold_505-1510915933:164375..164563TCONS_00069685-exon-scaffold_505-1510915933:164375..164563Clytia hemisphaericaexon
TCONS_00069685-exon-scaffold_505-1575043694:164375..164563TCONS_00069685-exon-scaffold_505-1575043694:164375..164563Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_505supercontigscaffold_505:164375..164563 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069685 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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