TCONS_00069672 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069672
Unique NameTCONS_00069672
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2616

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069672 ID=TCONS_00069672|Name=TCONS_00069672|organism=Clytia hemisphaerica|type=transcript|length=2616bp
TTTAAGAATTTGCTTGCAGTTTCTTTGCGGAGAAAATCATGTCGAAGGAG
GATTCCTTCAAATTCACCATGACGCAACTTCAACAACGTCATCCGTCCGT
CACTAAACCGTTCCAAGAAGAATTCGTCGACGTTAACATCAAAAATGGAT
TCTTCGACGCTGCCAACAAAATGAGACGACAagGTGTTTTGACAGACGTA
TCGCTAGTTGTTGATCAACAAACCTTTCACACTCATAAACTGATATTATG
TTCATGCAGTGATTATTTTACTAGCATGTTTAACGGTCCTTTGGCGCATC
ACGGCCAACAAGTCTTCATATCGGGCGTCAGTGCCCAAAGCATGGAAGCT
ATTTTGAATTACGTTTATACGGGATCGATTATCATCAACGAGGAGTTTAT
ACAAGACATTTTAGAAGCAGCTtgtttgtttctattgaaaaactTACGCG
AACGATGCGCGCGATTTCTGCGCGACCGATTAGATGGTGGCAATTGTTTA
CAGATTTTCAGTATCGCTAAAAGTTGTTCATTGTTGGCTTTGATGGAGGA
TTCCCTAGAGTTCATCTCCGCGATCTTTCAAGATATTTCAGCGCTGAATG
ATTTTAAACAATTAAGTTTTGATGAACTTATTGATGTATTATCTCTTGAA
GATTTAGCAGTGCCAAGTGAAGATTACGTTTTAGAGGCAGCATTTCGATG
GTTAAATCATGATTTATAcggacgtcagcaaaaatttgtaGAAGTGCTAA
AAGCTATACATTTACCATACGTTAGTGACGATATGTTAAAACAGGTCATG
GAGAATGAAAAATCTTTACGTACTTTTCCTGAGCTGGAAATTCTCTTCCG
TTCCGCCTTACGTCTTACCGTTGAAAACTGGACTCTCTCCAAAGACAGTG
ATTTTAATTTACTCCAACCAAAATCATGGATAAATCCACGAAAATGTATT
CAATGTATACCGAGTCTTATCGCTATGGGTGGGCCTACATTGAACTTATT
TAACAGCGAACTTGGAAAATGGTGTGAAATAACGAAATGTAAACCACGGC
ATTGTCCAGGTATGGATGTTGTTGGGTCCACTATCTATGTTGTAGGTGGT
TCACTGGAATGGAAACGAAAACGTACTGGAGAGTATTACAACACTGAGAA
AAATGAATGGATCCCAATGGCGGATATGCACACACCACGAAGTAATTTCG
GTCTCGTCAATTTGGAAGGGAAACTGTATGCTATCGGTGGTTATGATGGG
AATTTCCCTTTAAAATCAGCAGAGGTTTATGATCCACGTACCAACCAATG
GACGCAAATCTCCGACATGACGACGGCAAGAGACGGCGCATGTAATGTGT
CGGACGGCGAATCGATTTACGTGATTGGAGGATACGACGGCCACGAATAC
AGACTGACGACAGAAGTTTATAAACCAGAAACTGGTCTATGGGATATCAG
TTCTATTCCAGAGACATCAGTGCAACGTCAGAACGCGATGTGTGTATACT
TTGATTCGAGTATTTACATTATTGGTGGTTACCATGGAGATACTTATCAT
TCATCGATGGAAGTATTAGACCTGGAAACGAACGAATGGTCTTTTTCAAG
CCCCTTAAGTGCACCAAGACATCACGCAGGCGCCGCTGCCATGAATGGAA
ACATTTACATTTGTGGTGGTTGGAGTGCACATATTCCCGTCAGCCACGTT
GACGTCTACTCTATCGCTCAAGATACGTGGCGTCGCGTTTCGCCTCTTCC
CACACCAACAATGATTCGCTCAGTAGCGGTTAACTTCCCACGAAAATGCA
TCTTGAATTTATTCGCTAACTCAAACAGTGATATGGCGGCTTATCGTGCG
TCAAGAATACGCTCCTTGCGTTCCATCTCGGAGTCATCTTCTTCAGGTAA
TGAGAAAACACAAACAGAAGCTGAAGCTTTTTTGACTTCCTCGACTGATG
AGTAGAATCTTGATTTTGTGTTAATATTTATTTCATGCTTTGAGTATATA
TTACCCTTTCTAATCGGTCTCTTGAATCAAGAAACTTGATGAAGCTTGGC
AAAGTAAGTCTCTCAGTTCGcccatttttttaacaatataGTGTAGCACC
TAATATGGATACCATACTAGCAAATAGCACGAAATCATTAACTACCCAAC
AAGCAGTTTTAAGGTGCGTTTGAAAAATGTCTTGGGTAAAAAGCTTCGAG
GGATCTTATAACATTTATATTTCTTATGAACTTTCATTTTGTATTGTATA
TAATTTATTAAAATTGAAACGTTTTTATAcaattaacatattttgaagtt
taattttcttcaattttcgtTTTTGTAAATACGATACCAAAAGTATCAGG
gacaaatttcatttttggtgACAACTTTTATGAAGATTCTCCTGCATCGC
CTGTTTTGTTTCTAGATGATCTTCAAAATGACAAAGCTCTTCTATAGCCG
ACCATTGTCCCCCCACCTCCAAAgcaaattttcccaaaaattagtGTCTT
TTCATTCCCTTTGCTTTTTTGTATTAATTTTTTGCCTTTTGTAAAATAGA
ATATGATGAATATATTTTGTGTTACTTGATATTCAAATAAGATTGACAGT
ATTAACTACTAAAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_505:40920..54219+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069672 ID=TCONS_00069672|Name=TCONS_00069672|organism=Clytia hemisphaerica|type=transcript|length=13300bp|location=Sequence derived from alignment at scaffold_505:40920..54219+ (Clytia hemisphaerica)
TTTAAGAATTTGCTTGCAGTTTCTTTGCGGAGAAAATCATGTATGTATaa
agtgtttctttttattttgtttttccttgCTAATTTTTTAATGATACTAA
TTTTGCATTCTGCATCAACGACAGGTCACTTGCCTTGAGTACCCCTCCCC
CGGTGGATTAATACGCAAGCTTcgtttgcgaatgtttgcattAACTCTTT
GATGCTTTTCAAGTGCTTCTAATTGTTGTCATTCTGTTTTATTTCTATTC
GAAATATCTGGAAGAGGTAAATTTCAAATTGACCAGTTTGTGAATAAAGG
GTTTTTTATGATCGTGTTAATTAACGCTGATAATTGTTGTCTTTATATTA
TTCCAGTAGACtaaatttgttgatttttgtaAGGGCGTATTCCATTCCAT
AATCAAGTTAAAACAATGTAGTAACTCGGAATATCTAGATGAACTTTCAT
ACTTTCTATTTTGAGGTGTATACAAGCCTTTTTATTTGTTTCGTAAAGCA
AATCTATTTTGATAAAGCTCTGTTAACATACTTTGACAAAGGGAATTTCA
ATATGgtttatacacgtttttataagaacaaactgtataagaacataagg
cttcgatggacaaaatgttaagaacaaNagaacaaactgtataagaacat
aactcTTCGATggacaaaatgttaagaacaagttaagaactttttaaggc
tttgcggactcaaaACACacgttttcttaggaaaatgggtaaaaatggtc
acaaaatggttaagaacattttgaggcttcaaaacttttggatgttctta
tagaatAATGTGTAGTTAGATTTAGACTTATCTTATTATAAGTAGGTGCA
TGCTTAATTTGGTTAAAGACTTAAGCTGCTGGcataaattagatttattg
tAAACAGAAATGGGTATTGTCTTGggacaatgatttttttcttgtgcTCT
GTATTCCTGTATAGTGCCATACAGCACGaattttcgtgggtcacccttAT
GTCCTTGTGTCACGGGGGGCCGGGGGGCCGTAGAAGAAATTCACTTGATT
TGATTTCAGAAAGCTAGAGATGATAGAATTACATAGatatcaaataaaag
aaaaagggaGATATTAATAATAAATGTTTGATAAGCCTTTTCATTGAACC
GAGTTTCGTCTCTCAATATATGAGAATATATCAATCGAAAACTGTGAATG
AAAATATGATCAGTTGATAAAAAACTCGCTGgagaaaacatcaaaaaata
tatttctcagAAGAAAGAGATTGTCTATATATATTTTGGTGTGTTGAAAG
GAAACGTTTCTgaaattttagttttgttttttttgtggggAAAGATGGCT
GTTGAGAGAGCAGAGGAACTCCGGTTGTTTTGCCCGACCGAACCATTGGC
CAAAATGATGAGAGGAGATGTAAGGTAAGGATGTTCCTTTATCATTATGG
ACATATGACTTGATATTTCTGGGATCTAAGGTTCTGACTTGATTTTTCCC
GTTCGAGACCGTGTAGTGtctttcgctagcgattttacAGCAAAAGTTCG
ATTTGTTTTGGGCCTAGGATATAGTAGAAGCTTCTTTGTAAGCCTTCgac
tgaatttcaaaattctttccaaatttaagaaattctaataattatttcta
ttttgggCCTCCTTATTTCCGATAGCCTGAATAAGTCACGCACGATCTCA
CGAGACCGGCTTTTCGGTGATGAGAATACCGTAATTGGCCATCGTTTATC
AAGGATTAATTTACCATCTCATGCAACTATTCagtaaaagttttgatttt
tcaaagttcatttttgactgGTGCCTAGGACTAAAGCTATTTTTGAAGTA
ATTTgcatcatcatcgtcatcgtcATATGTAACAATTTCGTAATTAGatg
agattttttcttttatgcTGACTTTCTAATTACTATTAGCCAATAATGAC
CccttaaaaagattttgatgtttttgaaaaaagcagTATCACAGCCAGAT
TTAcaagtttttcatgttttcaatcCGATTCATAAATCTCTCGTTCATAG
TCATCAAGCTTAGAAGTAGACAGGTCTTTAAAAATAATTGCGTcatgttt
ttgtgtttttacgGTCtgttcaaaactttaaaactacCCCTTTCTCGCAA
ACTACATTGATTTTCTGCCTTATCCCTTTGCTTTATAAGCATTAAATCAT
GAATACGTGATGTCTCGATCATTGCAATCCATAGACAATCATACCCTCAA
ACACTCCTCTGTGGTTGTCATGACGAACAATGTTTCATCTGTTTCTCAGA
AATGTTGTTTTCCTTCTCAGTTCTCAGTTAACACACGGTCGAGATATGGA
AAGAATTTCGATCATATTTATATAGCAAATCATGATATGTGACCCTTTCA
AGGTTTCAATTTTACTGGGATTTCGAAGCAGTAACTCTTTAGTATCTGAA
AACCTTCAGATTGCTCTTATAGCTCTCTCAGCtttgtttttgatttccca
GCTGGATTCTCTCAAAACACAGTGCCCTCtatcataaagaaaaaaattat
caatgcATAACAACTTTCCCACTGCGTTTTCTGCAATAATCAATTCAACA
GACTTTAAAACGATCGATTCGAAAGGTCATTTCTAGCATAACATGTCACA
AGCTATGGAACAAATATTTCaggatcaaaataaaaaaatttgacttgTCT
ACCACCAGGTCCAGAACCTCTAGGTCCTTAAAATCAAACCCACCACATCA
CATTGGAGAAGCTTCGTCTTTCTCTTTAGATAGAAGTAAAGTTTGCCCCT
CAAAtctatattgagaattccgcttattttaacgtttttcaagatttaaa
gttgcggcgagaaagtcgattttgggctatctctttcatttaatcgaata
tttcaatttgggaggggttggcagacttccaagctatattctgagccttc
tTGGactatttttggatttttgggtcctcagatcctaaggtccttcctaa
gtcttaagtctagcgttaaaaatCAGAGTTGAAATTCTGCCCTTCGAACC
TACCCCCGGGGGgttactaggtttgcgaggtgacgggtatgtccgagccg
aaaatcgaaaattttgagagacaaaattttggtgattttgggaccctttg
agagactttttcctaaattttgatccattttttccaaattttggtttgat
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aacttatcaagttttaattgctagcaaactcgtaaaaaagtttgataacc
taacgaggagtgttttctatgagttcttaatccacctattctaatccgtt
ggtgTAAGTAACTTATTTCAGGCGATCAATGTTTTTTCTTGGAAGGATTT
TATCTTCTCCTCATCGTGTGCTCGATAAGTTAATAGAGCAGTATTATATT
CATATTAAGATTGTTCATTAAAGGTTTGCGTGGAAGCGCCAAAAAAGTCC
TGAGTTTTAAATCAGATTTTATGTCACCTTATTATAGGGGTTTCTTCGAA
TTTGGATACCCCTATGGATAGCGGCAGCTTTAGTTTTAATCTTTAGGTTT
CCTTataaaagtttgtgtgtgtttgAGGAACTAGCTCGTTTTCTTTCCTA
TTCATTCTTTAAAAGCTAtggtttacacgtttttttttttaagaaactag
ttttaccaagcagcctcaatgtttcttaagaaatcggccttttgagtctt
aaatgtttcttacatgtttcNgcctcaatgtttcttaagaaatcggcctt
ttgagccttaaatgtttcttacatgtttctaaactttttgacataatcag
ccttataaaaggctggattggaaggttcttaaaaaaacgaattaaagaat
gtttttttttccttctcagcctcagcatgtttcttagatgtttcttagtt
tttagacattctgagcctcatgtttcttaaaagtgtgtttcttaaaaaaa
aaaacgtgtattctttatgattcttCAGGTCGAAGGAGGATTCCTTCAAA
TTCACCATGACGCAACTTCAACAACGTCATCCGTCCGTCACTAAACCGTT
CCAAGAAGAATTCGTCGACGTTAACATCAAAAATGGATTCTTCGACGCTG
CCAACAAAATGAGACGACAaggtatttgattttttctcaCTCCGTTCAGA
GGGATTCAAACACGTTTATAGCAACGAAATCAACCTTTACCCTGATCTAG
GGTACGTCATTATTTTCTTTTGCCGCGAGCATAAAACACCTCTAATAAGT
ACCTTTTAACTAAAGATCTTCTATATATGTTATCGCACTGCCCTTTGGTC
AAAATCTTTCGGCATCTGTTAGACCTAGAAATCTAGCTTCAGTGTATACC
CCAATGTTAAGTTTTCCAAGCGttgaatatatatatatactatAAGAGTA
TCTTAGCCAGTATTCTTACGATTTCTTCCCATTTCTTTCTCAGGTGTTTT
GACAGACGTATCGCTAGTTGTTGATCAACAAACCTTTCACACTCATAAAC
TGATATTATGTTCATGCAGTGATTATTTTACTAGCATGTTTAACGGTCCT
TTGGCGCATCACGGCCAACAAGTCTTCATATCGGGCGTCAGTGCCCAAAG
CATGGAAGCTATTTTGAATTACGTTTATACGGGATCGATTATCATCAACG
AGGAGTTTATACAAGACATTTTAGAAGCAGCTtgtttgtttctattgaaa
aactTACGCGAACGATGCGCGCGATTTCTGCGCGACCGATTAGATGGTGG
CAATTGTTTACAGATTTTCAGTATCGCTAAAAGTTGTTCATTGTTGGCTT
TGATGGAGGATTCCCTAGAGTTCATCTCCGCGATCTTTCAAGATATTTCA
GCGCTGAATGATTTTAAACAATTAAGTTTTGATGAACTTATTGATGTATT
ATCTCTTGAAGATTTAGCAGTGCCAAGTGAAGATTACGTTTTAGAGGCAG
CATTTCGATGGTTAAATCATGATTTATAcggacgtcagcaaaaatttgta
GAAGTGCTAAAAGCTATACATTTACCATACGTTAGTGACGATATGTTAAA
ACAGGTCATGGAGAATGAAAAATCTTTACGTACTTTTCCTGAGCTGGAAA
TTCTCTTCCGTTCCGCCTTACGTCTTACCGTTGAAAACTGGACTCTCTCC
AAAGACAGTGATTTTAATTTACTCCAACCAAAATCATGGATAAATCCACG
AAAATGTATTCAATGTATACCGAGTCTTATCGCTATGGGTGGGCCTACAT
TGAACTTATTTAACAGCGAACTTGGAAAATGGTGTGAAATAACGAAATGT
AAACCACGGCATTGTCCAGGTATGGATGTTGTTGGGTCCACTATCTATGT
TGTAGGTGGTTCACTGGAATGGAAACGAAAACGTACTGGAGAGTATTACA
ACACTGAGAAAAATGAATGGATCCCAATGGCGGATATGCACACACCACGA
AGTAATTTCGGTCTCGTCAATTTGGAAGGGAAACTGTATGCTATCGGTGG
TTATGATGGGAATTTCCCTTTAAAGTAAGCTTGATAAAATCTCCTTTTTA
CTTCACTGTACTATAAAACTTGAGCCTAATTTTGGTTGTAAAATAATTCG
GTCTACTAGGTAGCTCTTGCAGCTCATGTTTGCAAATTGGATTCTACAAC
AATTAGTATTTCCAATGAGCTAAACTTAGGCGAATTAAATTGAACAGTCA
TGTGAACTTACTTTTGTTCCATCAGATCAGCAGAGGTTTATGATCCACGT
ACCAACCAATGGACGCAAATCTCCGACATGACGACGGCAAGAGACGGCGC
ATGTAATGTGTCGGACGGCGAATCGATTTACGTGATTGGAGGATACGACG
GCCACGAATACAGACTGACGACAGAAGTTTATAAACCAGAAACTGGTCTA
TGGGATATCAGTTGTAAGTTGCGACATCCTCCcctatttttttctatttt
aagtCAACTCACTCCTTTTAATTCGAATcattttaactaaaacattggat
cttgagctttaaatatgTATACTATATTCaagcttagttaactaggcctG
TATTTACAAGACTAAGACATTATGGACGTTGAAGTTTGCCTTCTAGGCTA
CACTAGAATCTGCGTAAAAATATATggaggatttttttatttcctcgttt
tttgAAGTTCGgtcgagaaagtcgcttttggtcTTTTTCTTAAATGTAGG
GGTTTATAAACTTCCAGGCAATATTCTGAGTCTTGTTGGGCCACTATTAa
acttttgaatcctcagatcctaaggacCTAATCTAAGTCTAGCGTAAAAA
CACTACCGTTCCAACCAAAGTTAGcccgcttccaaatcgtttgtggctac
tataagatttcgtgggattttccctttttttctcaaatacatGTATTACG
ATCTTGATTGTATATCCTCCGTAATTGACGTAATTCTGAATGTTGTGAAA
GAGTTAACTTACATGAAAACTCCATTTGGTTTATCAGCTATTCCAGAGAC
ATCAGTGCAACGTCAGAACGCGATGTGTGTATACTTTGATTCGAGTATTT
ACATTATTGGTGGTTACCATGGAGATACTTATCATTCATCGATGGAAGTA
TTAGACCTGGAAACGAACGAATGGTCTTTTTCAAGCCCCTTAAGTGCACC
AAGACATCACGCAGGCGCCGCTGCCATGAATGGGTAAGTCGTGTTTGATT
CTTTATGAATGTTTACTTCAGTATCTATCAGCATCATATTGTCCTTTAAG
TTATTGCTTAATTTTTAGAGAAATTGTATTCTACTTTTCCACAAAGGACC
TTTCTTGCATCtaatgtttcattttcaaagcgTATGCTtaatttatcgtt
ctttaaacCGTTAGTGCTTAACCTCTGTAATGTACAAAAAGGAATGAAAT
CGCTGGGATGGTTTCACTACTACGGTTCGGGGGTTGGGATGGCTAAATTA
GTCGTTCTTTATTgttttgaattcaatttttcgttgatgagaattttttt
tttcttctttctgaaaGAAAGAgtaaattttaaattcaaaaccaCAGAAT
TCACAATCTTGCTTGGTTTCTGTATGAAATAGAATTTGCCATGTacgata
tttttgacatttcgtTGTGATTTACAACATATAATTTCCTCAAGGTTTCT
TAACATGAATCTATTCTTCTCTTTTTCTGCAGAAACATTTACATTTGTGG
TGGTTGGAGTGCACATATTCCCGTCAGCCACGTTGACGTCTACTCTATCG
CTCAAGATACGTGGCGTCGCGTTTCGCCTCTTCCCACACCAACAATGATT
CGCTCAGTAGCGGTTAACTTCCCACGAAAATGCATCTTGAATTTATTCGC
TAACTCAAACAGTGATATGGCGGCTTATCGTGCGTCAAGAATACGCTCCT
TGCGTTCCATCTCGGAGTCATCTTCTTCAGGTAATGAGAAAACACAAACA
GAAGCTGAAGCTTTTTTGACTTCCTCGACTGATGAGTAGAATCTTGATTT
TGTGTTAATATTTATTTCATGCTTTGAGTATATATTACCCTTTCTAATCG
GTCTCTTGAATCAAGAAACTTGATGAAGCTTGGCAAAGTAAGTCTCTCAG
TTCGcccatttttttaacaatataGTGTAGCACCTAATATGGATACCATA
CTAGCAAATAGCACGAAATCATTAACTACCCAACAAGCAGTTTTAAGGTG
CGTTTGAAAAATGTCTTGGGTAAAAAGCTTCGAGGGATCTTATAACATTT
ATATTTCTTATGAACTTTCATTTTGTATTGTATATAATTTATTAAAATTG
AAACGTTTTTATAcaattaacatattttgaagtttaattttcttcaattt
tcgtTTTTGTAAATACGATACCAAAAGTATCAGGgacaaatttcattttt
ggtgACAACTTTTATGAAGATTCTCCTGCATCGCCTGTTTTGTTTCTAGA
TGATCTTCAAAATGACAAAGCTCTTCTATAGCCGACCATTGTCCCCCCAC
CTCCAAAgcaaattttcccaaaaattagtGTCTTTTCATTCCCTTTGCTT
TTTTGTATTAATTTTTTGCCTTTTGTAAAATAGAATATGATGAATATATT
TTGTGTTACTTGATATTCAAATAAGATTGACAGTATTAACTACTAAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043382XLOC_043382Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069672-exon-scaffold_505-1491911889:40920..40959TCONS_00069672-exon-scaffold_505-1491911889:40920..40959Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:40920..40959TCONS_00069672-exon-scaffold_505-1510915933:40920..40959Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:40920..40959TCONS_00069672-exon-scaffold_505-1575043694:40920..40959Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1491911889:50048..50190TCONS_00069672-exon-scaffold_505-1491911889:50048..50190Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:50048..50190TCONS_00069672-exon-scaffold_505-1510915933:50048..50190Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:50048..50190TCONS_00069672-exon-scaffold_505-1575043694:50048..50190Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1491911889:50513..51593TCONS_00069672-exon-scaffold_505-1491911889:50513..51593Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:50513..51593TCONS_00069672-exon-scaffold_505-1510915933:50513..51593Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:50513..51593TCONS_00069672-exon-scaffold_505-1575043694:50513..51593Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1491911889:51795..51982TCONS_00069672-exon-scaffold_505-1491911889:51795..51982Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:51795..51982TCONS_00069672-exon-scaffold_505-1510915933:51795..51982Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:51795..51982TCONS_00069672-exon-scaffold_505-1575043694:51795..51982Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1491911889:52557..52752TCONS_00069672-exon-scaffold_505-1491911889:52557..52752Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:52557..52752TCONS_00069672-exon-scaffold_505-1510915933:52557..52752Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:52557..52752TCONS_00069672-exon-scaffold_505-1575043694:52557..52752Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1491911889:53252..54219TCONS_00069672-exon-scaffold_505-1491911889:53252..54219Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1510915933:53252..54219TCONS_00069672-exon-scaffold_505-1510915933:53252..54219Clytia hemisphaericaexon
TCONS_00069672-exon-scaffold_505-1575043694:53252..54219TCONS_00069672-exon-scaffold_505-1575043694:53252..54219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_505supercontigscaffold_505:40920..54219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.020067	0.399877	4.70671e-08	0	0	0	1.06143e-09	0	3.47773	10.654	7.58672	2.71184	2.18947	1.33344	3.69815	1.28706	1.09047	0.0206005	2.0316	0.00241585	4.91373e-05	0.0528627	0.00257586	0.0010939	0	0	1.5444	1.34576e-05	0.0172752	1.38181e-05
Blast
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BLAST of TCONS_00069672 vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 5.838e-78
Identity = 170/578 (29.41%), Postives = 279/578 (48.27%), Query Frame = 3 
Query:  153 FDAANKMRRQGVLTDVSLVVDQQTFHTHKLILCSCSDYFTSMFNGPLAHHGQ-QVFISGVSAQSMEAILNYVYTGSIIINEEFIQDILEAACLFLLKNLRERCARFLRDRLDGGNCLQIFSIAKSCSLLALMEDSLEFISAIFQDISALNDFKQLSFDELIDVLSLEDLAVPSEDYVLEAAFRWLNHDLYGRQQKFVEVLKAIHLPYVSDDMLKQVMENEKSLRTFPELEILFRSALRLTVENWTLSKDSDFNLLQPK------SWINPRKCIQCIPSLIAMGGPTL-------NLFNSELGKWCEITKCKPRHCP-GMDVVGSTIYVVGGSLEWKRKRTGEYYNTEKNEWIPMADMHTPRSNFGLVNLEGKLYAIGGYDGNFPLKSAEVYDPRTNQWTQISDMTTARDGACNVSDGESIYVIGGYDGHEYRLTTEVYKPETGLWDISSIPETSVQRQNAMCVYFDSSIYIIGGYHGDTYHSSMEVLDLETNEWSFSSPLSAPRHHAGAAAMNGNIYICGGWSAHIPVSHVDVYSIAQDTWRRVSPLPTPTMIRSVAV----NFPRKCILNLFANSNS 1829
            F A ++MR++G+L D+ L V  +    HK++L SCS YF +MF   ++   Q  V +  +  Q+++ ++ + YT  I++ E  +Q +L AA L  L  +R+ C +FL  +LD  NCL I   A + S   L++ +  ++   F D++   +F  L   ++++++S + L VPSE+ V  A   W+ HD+  R+Q    ++K + LP +S D L   ++ E  +R  P+ + L   AL+             F+LL  +      S   PR+C    P L A+GG +L         +++   +W  +     R    G+  VG+ +Y VGG        T E Y+   N W P   M T RS  G+  L G LY+ GGYDG   L SAE YDP T  WT ++ M+T R      +   ++Y +GGYD   +  T E Y+P+  +W  S +     +R +A     + ++Y+ GG  G +  +S+E    +   W   +P++  R      AM+G +Y  GG      ++ ++ Y+   + W   S + T      VAV    NFP      L  +S S
Sbjct:   79 FVAMSRMRQRGLLCDIVLHVAAKEIRAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCSDLLKAAHRYVLQHFVDVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWVKHDVDARRQHVPRLMKCVRLPLLSRDFLLGHVDAESLVRHHPDCKDLLIEALK-------------FHLLPEQRGVLGTSRTRPRRCEGAGPVLFAVGGGSLFAIHGDCEAYDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDPLTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVW--SPVASMLSRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTS 641
The following BLAST results are available for this feature:
BLAST of TCONS_00069672 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH175.838e-7829.41Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE... [more]
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