TCONS_00069651 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069651
Unique NameTCONS_00069651
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length443

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069651 ID=TCONS_00069651|Name=TCONS_00069651|organism=Clytia hemisphaerica|type=transcript|length=443bp
CCTCATAAACCTTCAATTATCTGAAAAGCATTTAAAAAGCATTAGAAAGC
AATGTTAAATGGTAAATAATCTGAAAAGAGTTCAAAAACAATCACAAAAC
TAACGGCATGGATAGCTTTTGAATCACAAACTACAGATGCTTTTTGGATG
ACTTGAAAGCAATACAGACAGTATCCATGTGGATAGTTTTGAGATGGAAA
ATTCCAAATGTTGTTTAGATGGCTTAAAAACCAATCTTTGCGATATTCAT
TTGGATAGCTTATGGATGAGAATATCCCGATGCTTTCTTGATGGGAATTT
ATACATTTTCtacaaaaatcttaaagaaacagttttttataaaatagtag
ACGCTTTCCAGATGGTTTTAACCACCACAAAGAGCTTTTAAATTGTAGAC
ttatttgttaatttttgaaaaagtgttGAGCTATCAAAATCAG
Run BLAST on NCBI

transcript from alignment at scaffold_503:76158..76600

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069651 ID=TCONS_00069651|Name=TCONS_00069651|organism=Clytia hemisphaerica|type=transcript|length=443bp|location=Sequence derived from alignment at scaffold_503:76158..76600 (Clytia hemisphaerica)
CTGATTTTGATAGCTCaacactttttcaaaaattaacaaataaGTCTACA
ATTTAAAAGCTCTTTGTGGTGGTTAAAACCATCTGGAAAGCGTctactat
tttataaaaaactgtttctttaagatttttgtaGAAAATGTATAAATTCC
CATCAAGAAAGCATCGGGATATTCTCATCCATAAGCTATCCAAATGAATA
TCGCAAAGATTGGTTTTTAAGCCATCTAAACAACATTTGGAATTTTCCAT
CTCAAAACTATCCACATGGATACTGTCTGTATTGCTTTCAAGTCATCCAA
AAAGCATCTGTAGTTTGTGATTCAAAAGCTATCCATGCCGTTAGTTTTGT
GATTGTTTTTGAACTCTTTTCAGATTATTTACCATTTAACATTGCTTTCT
AATGCTTTTTAAATGCTTTTCAGATAATTGAAGGTTTATGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043366XLOC_043366Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069651-exon-scaffold_503-1491911889:76158..76600TCONS_00069651-exon-scaffold_503-1491911889:76158..76600Clytia hemisphaericaexon
TCONS_00069651-exon-scaffold_503-1510915933:76158..76600TCONS_00069651-exon-scaffold_503-1510915933:76158..76600Clytia hemisphaericaexon
TCONS_00069651-exon-scaffold_503-1575043694:76158..76600TCONS_00069651-exon-scaffold_503-1575043694:76158..76600Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_503supercontigscaffold_503:76158..76600 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.303229	0.295696	0	1.00769	3.06691	1.93881	2.33909	2.5548	0.51105	1.26604	0.768028	0.504871	0	0.209434	0.172183	0.369558	0	0	0	0.505956	0.146589	0.214503	0	0.158044	0.651126	1.16223	0.62368	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069651 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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