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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069617 ID=TCONS_00069617|Name=TCONS_00069617|organism=Clytia hemisphaerica|type=transcript|length=1698bp
NNTGAGTCTGATTGAACGCCAAGCTATTTacgctgaaaaaaagaaaatgg
cgCAAGCTTATGAAGATCGCAAATTTTAAAAGCTTGTGCTTGTGTAGTTT
AATTGCTAACTGAGAGTGTTTAGTTGTGTCGTTGTTTTTTGAACCGTTCA
AGTTTTCTTGAAGATTTGGCCCACACCGTTTATTTGTTGtgaaaatttgg
tgttttgTACATATGGTTGATTTTGATTGTCGGCCTTCTTTCTTGACTTT
TATGTCGCTCTTTCGACACTTAAGACAGTTTACGAAATGGAAAATTTCAG
ATAAACCAAATTTATTATGGGACTGCAATTGACgtcagggctcgaaataa
cggtcggacatcggacattgtccgacccagcCTTGTGACGTAACATTCTT
TAGAGCAGGTTAAGTATGAAAATATTTACGACTTAAAGAGTTTTGATTTA
CTCCTTAGTCGATTCAACTTAATTAACAACCAAAAATGTTCCCAACTTCT
AATCGATTTCTATTACTATGGCAATGATATCATATTCTTGCTTGTAATTT
CGCCAAAAGATCGTAAATCTCTCCATGCTTAACCCCTCCATTACCTTACT
AATTTACAAACATTTACAGACTTTTCCTGACAACATACGCAGACTCGATG
AGATATTGCCGAAGGCGTTTGATTGAGCCTCCGATTTAGGATTTGAAGTT
ACTCGTATTTTACATTACGCGACCCGCATGGTTTTCACCGAAATATCCAA
CAATTGAAAGTATAATATCTACCGCTATATTTATGAAAATGAGCCaggca
aaaagaaagaaagcgcTGAGTTCAATCGGTCAACCAAAATGCAGCAGAAA
CTTTAGAGCATCACTTTCTCTGTATAGGAAAGGTTCAGCTGTAGCTTTCG
GCCATATCTCATTGATTGGACGTTTACAATTACTTACTGACATTTGAcgt
ttttacaaaatattttttttctttaaaaaagctcagacaaaaattttggt
tttgcaatttgattttttctaaataaaatttatgataatttattgAGCTG
ATTGAGAGAAATCTGTGATAAAACATTTTCCTTGGATTTTAAAGTGACGA
TATTTCGAAATATTATAATCTTATGTATTGTTTATATGGGACTTTATTCT
AGATTTATGTGGACATGTTTCCCCCACTTAAAATCCccctaatagacgat
atcggcttaacgaaattctccccgaatgattacccatgatgcattgcgca
aaaaaatcagtaagtcaatattgtccgtgaatttttttgcgcaatgcatc
atgggtaatcattcggggagaattcgttaagccgatatcgtctattgact
TAAAAAGAACCTTTTTGCTTTGAGCTTTGAGACGGCAAGAAAACAATTCT
TATAGCTTCGTTAAACCATGACTATTAGAATAACTTTCTATCACGGAACA
TTTCATTGAACGTACCACAAAACTTTTGACGaatattaaaaaattattat
cgtaattttttccgtttttggtaagaaataattttttcctaaaaatttta
aggtatttattatattttcttttgtttatagaATAGTGTATGCGCAAATT
TTATGTGCtgttagatttttaaaaaagcattttttacagaattttttGCA
TCCAACCGTTTTATCCTTCGAAACATAACTAAGATAACTGAGCACCCC Run BLAST on NCBI transcript from alignment at scaffold_502:163510..165207 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069617 ID=TCONS_00069617|Name=TCONS_00069617|organism=Clytia hemisphaerica|type=transcript|length=1698bp|location=Sequence derived from alignment at scaffold_502:163510..165207 (Clytia hemisphaerica)
GGGGTGCTCAGTTATCTTAGTTATGTTTCGAAGGATAAAACGGTTGGATG
CaaaaaattctgtaaaaaatgcttttttaaaaatctaacaGCACATAAAA
TTTGCGCATACACTATtctataaacaaaagaaaatataataaatacctta
aaatttttaggaaaaaattatttcttaccaaaaacggaaaaaattacgat
aataattttttaatattCGTCAAAAGTTTTGTGGTACGTTCAATGAAATG
TTCCGTGATAGAAAGTTATTCTAATAGTCATGGTTTAACGAAGCTATAAG
AATTGTTTTCTTGCCGTCTCAAAGCTCAAAGCAAAAAGGTTCTTTTTAag
tcaatagacgatatcggcttaacgaattctccccgaatgattacccatga
tgcattgcgcaaaaaaattcacggacaatattgacttactgatttttttg
cgcaatgcatcatgggtaatcattcggggagaatttcgttaagccgatat
cgtctattagggGGATTTTAAGTGGGGGAAACATGTCCACATAAATCTAG
AATAAAGTCCCATATAAACAATACATAAGATTATAATATTTCGAAATATC
GTCACTTTAAAATCCAAGGAAAATGTTTTATCACAGATTTCTCTCAATCA
GCTcaataaattatcataaattttatttagaaaaaatcaaattgcaaaac
caaaatttttgtctgagcttttttaaagaaaaaaaatattttgtaaaaac
gTCAAATGTCAGTAAGTAATTGTAAACGTCCAATCAATGAGATATGGCCG
AAAGCTACAGCTGAACCTTTCCTATACAGAGAAAGTGATGCTCTAAAGTT
TCTGCTGCATTTTGGTTGACCGATTGAACTCAgcgctttctttctttttg
cctGGCTCATTTTCATAAATATAGCGGTAGATATTATACTTTCAATTGTT
GGATATTTCGGTGAAAACCATGCGGGTCGCGTAATGTAAAATACGAGTAA
CTTCAAATCCTAAATCGGAGGCTCAATCAAACGCCTTCGGCAATATCTCA
TCGAGTCTGCGTATGTTGTCAGGAAAAGTCTGTAAATGTTTGTAAATTAG
TAAGGTAATGGAGGGGTTAAGCATGGAGAGATTTACGATCTTTTGGCGAA
ATTACAAGCAAGAATATGATATCATTGCCATAGTAATAGAAATCGATTAG
AAGTTGGGAACATTTTTGGTTGTTAATTAAGTTGAATCGACTAAGGAGTA
AATCAAAACTCTTTAAGTCGTAAATATTTTCATACTTAACCTGCTCTAAA
GAATGTTACGTCACAAGgctgggtcggacaatgtccgatgtccgaccgtt
atttcgagccctgacGTCAATTGCAGTCCCATAATAAATTTGGTTTATCT
GAAATTTTCCATTTCGTAAACTGTCTTAAGTGTCGAAAGAGCGACATAAA
AGTCAAGAAAGAAGGCCGACAATCAAAATCAACCATATGTAcaaaacacc
aaattttcaCAACAAATAAACGGTGTGGGCCAAATCTTCAAGAAAACTTG
AACGGTTCAAAAAACAACGACACAACTAAACACTCTCAGTTAGCAATTAA
ACTACACAAGCACAAGCTTTTAAAATTTGCGATCTTCATAAGCTTGcgcc
attttctttttttcagcgtAAATAGCTTGGCGTTCAATCAGACTCANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069617-exon-scaffold_502-1491911889:163510..165207 | TCONS_00069617-exon-scaffold_502-1491911889:163510..165207 | Clytia hemisphaerica | exon |
| TCONS_00069617-exon-scaffold_502-1510915933:163510..165207 | TCONS_00069617-exon-scaffold_502-1510915933:163510..165207 | Clytia hemisphaerica | exon |
| TCONS_00069617-exon-scaffold_502-1575043694:163510..165207 | TCONS_00069617-exon-scaffold_502-1575043694:163510..165207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_502 | supercontig | scaffold_502:163510..165207 . |
Blast
The following BLAST results are available for this feature:
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