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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069509 ID=TCONS_00069509|Name=TCONS_00069509|organism=Clytia hemisphaerica|type=transcript|length=1159bp
tagaaAAGCAAGAAGCTCAACAgctattttgctttttcttttggtcaCTG
GTGCCATCGTTTCTACATGGATAGGGAATGGTCTAATGGTCATGGTATCC
TGTTTCTTAAATAGAGAACATTTTGTTATGGATTTGTACAGTTGTTCTTC
AGAAATTATTATGGGGCTTATCGCAACCAACCAtcttaacaaaataaaca
aagaccaaAGACCGACCAATGGAAACATTTACTTTAGCCCTTTTGAAAAT
TGAGAGTGGCATATTTTTGCTGCATGGTAATACATCCAAGTAATTTGGTA
GTCTTTGTTGGCTGCAATCACAAATATGTTCGTTTCAACGACCGACCGAC
ACCgactgaccgaccgaccgaccagCCGGCCgactcactttgtagaccga
tcGACCGCCTCACCACTTTGTGGaccaaccgactcactttttagaccgac
tgaCTCACTTTATAGaccaaccgactcactttttagaccaaccgacttac
tttttagaccgatcaaccgactcactttttagaccgatcaaccgactcac
tttttagaccgaccgactcactttttagaccgaccgactcactttttaga
cagaccgactcactttttaaaccgaccgactaactttttaaaccgaccga
ctcactttttagaccgatcgacggactcactttttagaccaatCGACCTA
CTCACttttagaccgatcgaccgactcactttttagaccgatcgaccgac
tcactttttagacggatcgaccgactcactttttagaccgattGACTTTA
CTTTGGTTGCCGGCTGCGCTGCGCAAGAAGAAGCAGCAACATGAATATTT
GGAACGTACAAAAAATAGTGTAGATACATTATCATGTTGAAACGTATGAT
TGAATATTATTGACACAATGACTATAtattagactttttccttatcaCAA
TGTTATGTTGTTTAACCAAGAACTCTAGAACaatgataaagaaaattaaa
gatacattttcactttattttccatcattattattattttgtaaGTAGGA
AAAGGTTATAGTTATTGACACCCTCATAtgataaaatgaatcattctaat
ttcattcagatttatatacattaaatttATCACTAGCACCTCTTCAATTA
ACACTAAAC Run BLAST on NCBI transcript from alignment at scaffold_501:50567..51725 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069509 ID=TCONS_00069509|Name=TCONS_00069509|organism=Clytia hemisphaerica|type=transcript|length=1159bp|location=Sequence derived from alignment at scaffold_501:50567..51725 (Clytia hemisphaerica)
GTTTAGTGTTAATTGAAGAGGTGCTAGTGATaaatttaatgtatataaat
ctgaatgaaattagaatgattcattttatcaTATGAGGGTGTCAATAACT
ATAACCTTTTCCTACttacaaaataataataatgatggaaaataaagtga
aaatgtatctttaattttctttatcattGTTCTAGAGTTCTTGGTTAAAC
AACATAACATTGtgataaggaaaaagtctaataTATAGTCATTGTGTCAA
TAATATTCAATCATACGTTTCAACATGATAATGTATCTACACTATTTTTT
GTACGTTCCAAATATTCATGTTGCTGCTTCTTCTTGCGCAGCGCAGCCGG
CAACCAAAGTAAAGTCaatcggtctaaaaagtgagtcggtcgatccgtct
aaaaagtgagtcggtcgatcggtctaaaaagtgagtcggtcgatcggtct
aaaaGTGAGTAGGTCGattggtctaaaaagtgagtccgtcgatcggtcta
aaaagtgagtcggtcggtttaaaaagttagtcggtcggtttaaaaagtga
gtcggtctgtctaaaaagtgagtcggtcggtctaaaaagtgagtcggtcg
gtctaaaaagtgagtcggttgatcggtctaaaaagtgagtcggttgatcg
gtctaaaaagtaagtcggttggtctaaaaagtgagtcggttggtCTATAA
AGTGAGtcagtcggtctaaaaagtgagtcggttggtCCACAAAGTGGTGA
GGCGGTCgatcggtctacaaagtgagtcGGCCGGctggtcggtcggtcgg
tcagtcGGTGTCGGTCGGTCGTTGAAACGAACATATTTGTGATTGCAGCC
AACAAAGACTACCAAATTACTTGGATGTATTACCATGCAGCAAAAATATG
CCACTCTCAATTTTCAAAAGGGCTAAAGTAAATGTTTCCATTGGTCGGTC
TttggtctttgtttattttgttaagaTGGTTGGTTGCGATAAGCCCCATA
ATAATTTCTGAAGAACAACTGTACAAATCCATAACAAAATGTTCTCTATT
TAAGAAACAGGATACCATGACCATTAGACCATTCCCTATCCATGTAGAAA
CGATGGCACCAGtgaccaaaagaaaaagcaaaatagcTGTTGAGCTTCTT
GCTTttcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069509-exon-scaffold_501-1491911889:50567..51725 | TCONS_00069509-exon-scaffold_501-1491911889:50567..51725 | Clytia hemisphaerica | exon |
| TCONS_00069509-exon-scaffold_501-1510915933:50567..51725 | TCONS_00069509-exon-scaffold_501-1510915933:50567..51725 | Clytia hemisphaerica | exon |
| TCONS_00069509-exon-scaffold_501-1575043694:50567..51725 | TCONS_00069509-exon-scaffold_501-1575043694:50567..51725 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_501 | supercontig | scaffold_501:50567..51725 . |
Blast
The following BLAST results are available for this feature:
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