TCONS_00069501 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069501
Unique NameTCONS_00069501
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069501 ID=TCONS_00069501|Name=TCONS_00069501|organism=Clytia hemisphaerica|type=transcript|length=1577bp
TAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCGGTATATCTAgtT
CAAGTGTTTGTCAATGTGAAACAGCTCCTCCTCAAAATGAGGCAGAGTCG
ACCCCTAAAGAAGAGAATGAAACACCTCAACAAAAAGGAACTATTGGTTT
CATTGGGTTGGGTAACATGGGCCACCACATGGGAATGAATTTGATAAAGG
ATGGGTATAACCTTGTTGTCTATGATGTATATCCTGAAGCAATGAAGCCT
TTCAAAGAGCTTGGCTCCACAGCTGTCACTTCACCACGAATGGTAGCAGA
ACAAGTCACCAAAATAATAACTATGTTACCTTCAAGccCTGATGTCTTTG
AAGCATATAATGGAGATCAAGGAATTTTGAGAGGTATGCAGCCAGATACA
TTAATGATCGACAGTAGTACTATAGACCCATCGGCTTCCAAAGAAGTTGC
GACAATAGCTGCCGATGCTGGCGGAACTTACATTGATGCACCTGTATCAG
GAGGAGTTGTTGCAGCACGTGACGGTGCGTTGACTTTCATGGTGGGTGCA
AAACGAGAAGATTTTGAACAAGCGGAAATCCTACTCACCAGCATGGCCAA
AAATGTTGTTCACTGTGGTGCTACAGGTACTGGACAGGCAGCAAAGATTT
GCAACAACATGTTGCTTGCTGTTTCGATGATTGGGACTGCTGAGGTGATG
AACATGGGTACACGACTTGGTCTAGACAAGAAGATGTTGGCGCACATTCT
GAACATCAGTACAGGTCGATGTTGGTCCAGCGAACTATATAATCCATGTC
CTGGTGTTATAGAAGGTGTCCCATCCTCCAACGATTATCAAGGTGGCTTC
GGTACTCAGCTCATGACTAAGGATCTCGGATTAGCTCAAAACGCATCGAC
AGCTACCAAATCAGCAACGCCCATGGattTAGATTTTGATATCGCTCGTT
CTACTGATTTGGGTAGCAGGTGGCTTCGTGCTACCTAGGGCGTGGCGACC
CTACCCTTTTGCGAGCCAATACAAACTTTGACGATGACGAAAGGTAGCAT
GGAATGAACTTTTAGTTCCACAGAGAGTGGTGCCTCTGCCATTTGTGagc
cacaacaacaacaacaacgacaacaaACTTTGGTAGCATGGAGCATTAAT
TCCACAGAGTTTTGCAACTCTGCCAGTAGCCAGCCTCGACagaaaacggt
ttttttggtaGTACGAATTGTTACTTAGCAATCAAACCGATTTACGCCAT
TTCATGACGACTGTGGTGAATGATGAATTAAAACGAATACTGAATGAATG
AATACTTTTATGACGATACTTCACGATGATGAGTAtgataatgaaaaatg
aagatgatgatgatatttcgacatttcaaacaaattctTATTCAAGGATT
TTGAAATCGATTTCACAAGTACACGAGAGACTATGTATAACGACGTCTTT
TCAAAGGAACCCAAGCGATCTTTGCTTCTTCGTGAGTTTGATGACTGGTG
AACGATATTTACTATGTAacgtaaattttttttaatttctgacTCGAGGA
AAAGAATTTTCTCATTGAAAAGACGTG
Run BLAST on NCBI

transcript from alignment at scaffold_501:3577..16668+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069501 ID=TCONS_00069501|Name=TCONS_00069501|organism=Clytia hemisphaerica|type=transcript|length=13092bp|location=Sequence derived from alignment at scaffold_501:3577..16668+ (Clytia hemisphaerica)
TAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCGGTATATCTAGTA
AGCGTTTTCTTTTCTTAGTTTCCTCTTCACCTGGGGGGGGGTAAAATATG
TTccaaattcaataattttcaagatgGTTATCTGACATTGCAGTAGCAGG
GTAGACTTTtaattattttggaaaatttgccaatttcaccgaacctccaa
agtcatttgatttgatttaatgaacgacgtattaaaaaatacacgatttc
tcttctgcaccgagtaggcttttaaatcgaaatatgaaaaaaatccatag
tggaacacacgcaagtgtctgtgcactctaagaggataaacttggtggag
ttatcataacaaatttgttgtcaaaagaGATTTAAGAGTAAGTGAAAaca
caggccagatatcaaccagtcccatgtttcaaccaatcgtcccaagttag
agctgcCCAAGTTGACGGTATTTTGTTCCAGACGATCGTAATCGATACAC
AGCCGTTTGCGTCACGCGTGTTCCAAAaggcaaaacaatggaaatgtgTC
AATCCGTTCAGCtggcaaaaatggcaaaaatacaaaatgttCGTCGCAAA
TaccttttcacaaaaaataaacCCAGAGATATATGTCTGGAATCAAAAAT
CTattgttaaatatttcccgttttccaaaaaggaaatatttgttaaaacg
ggctttcttcTCCATTTTCAgatgtcaaaacgccttccatacgccctgac
tgacgcccgttttagcgcctaaagaaagtttactttataagaatcaaatc
aaaaactcttgattgaaggcaatatatctttcggtaattagttattagaa
agtaaacaaaagatggcgaaaaagaaaagcatatttatttttattataag
catctacattataagaatcaaattaattactcttgattgaaggcaacatg
cctttcggtaattagttcttgcaAAGTAAACAAANNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattataagtgtctact
ttataagaatcaaatcaatttcagaatttttggcgttTCCACTGCGATaa
catgtgagcgataacttctctatttgagatgtgagcgaccgtctatcgca
tgtcatctcaaaagtaaagttgaaacaagctttcttcctccgactcaaat
tttatcgataaaacgaatttaaaatctacacatgggttattttgcttact
tagggatatttcgataggaagctctgcgggacattcttagcgacagctac
ttgctagtatatgtcaataatgaccttcacttttaaggaaatatttagtc
gcaattttgtgattttcgttttcatttttcattgcttatTTCTTTTCGCC
CTATcgcaaataaaacaataggttTTTAATCCCAGACGTTTgtcttgatt
tattttttgcgacAAACAAATTTGCGATGaacttattttttcaaatggac
ACCCAGCTTAAGGGCTTTTTTATAGCCAAACAGAATTACCATAGGCATAG
CTTTACCAAAATAATTATATGAAAGGTacaatttcagccattttcagcca
aatccaacaatTTTTCTTGCTTGTGCTTTATGGAAACTTATATTCTGTCC
ATGTGTAAACATTCCCGTATGTTCTGATGTACTTGACTACCGGTTTTCAA
ACCCGGATAAGGGGTACTGCAATAAAAGTTCCACCTCCCAAGGTGACTTT
CTTTGCCAataatttttgatagaattgtTCTCCTAATTTCCCCCTTTCAG
TAGGTCTTCCTCTATCTTATATGCTTcagaaaaccaaaaacattgtcCTA
AAAGCTTAGCCTCACAAAGCCCGCAGCTTATAATATAACCCCCTGGTTGA
AGCTTTGTATTCTTATCCTATAAATATAACAGAACAGTCATTCTACAGAA
ATGGCTGTCACgccagtttgcagagtgtgACGTGTTTGCTTGTTATCTGA
AAAAGTTGAGAgcaggtgcaaaatttgaggttttcaggtgTTTAAGTGCA
GACTGATGTTTTTTAACCCTGACTGTAAAGTTTTGCTATTTTCTCCTCAA
GTGcagctaattttagcaattttttgcctttttgggccaatttctGAGGT
ATAGGTGCACCTTGTCCAGACCAAAATTTATCACGTGCGCTCTTCCAGTG
CGGAACTTGGTATTTCCGAATTTTTCCTTGAGAGCAGCCTTGtcatactc
tgcaaactggctgTCACGTGACTTTTTTTCTACCGCATGATACAAATCAC
GCATTTTCCTTTGATGTTGGAAATTTTCACATGACAAGAAGTTCGGACTT
CACATTAAAAAACAATGTATATAGATTATGGAAAGGATTCAgtttattta
aaggttttaattattggacctacctccgggtgccccggtggccggaaaaa
ccgggtttttaggtattttcttgaaatttcatcataagtttttgtgattt
tttgcacaaagatgcgtattaacaatgcccaaaacatggccgagtctgat
ttttgagaaaaaaaaattttctggcttgatatgccggaaatcgccgtttt
tctggattttcattggactttttccttataatcagttgttttttcattca
aaaacattattaatagcaatgcccatcatcatgcatgttttaattttcaa
taaaattgatttttgaaaccggaactatttaaaaattgccggaacaacct
attttcgccggaaatacagtatttcttgaacttctcgagctgtactttat
atttttttatgaaattttgcacactgatgcaaaatgtgtCATCACAAGCG
ATTCGAAGTACAAATGAATTGGAACGTTCTCACGTTCCATAGCGTTCCTT
GGAACGTTCTAAATCGTTCCAGAACGTTCAGAAACGTTTCAGAACGTTCA
GGAACGATCTAGAACGTTTTAGGAACGCTATGGAACGTTCCAAAAGCGTC
CAAAAGCTAATAGATTACTCAATAAGAACGTTAGGGAACGATTTTGAACG
TACAGGACGTTCGTGAACGTTCTTCTGCAATGTTTCTGAACGTTTCAAGA
CACTCCTAAACTAGTAGTAAATAACAGGGAACGATCAGGAACGTTGAAGA
ACGTTCTCTGGCGTTCTAACAACGTTTCTAAACGTTCGAGAACGTTCCCT
ATCGTTCGTTTTGCTAGAacgttccattttatttgtatttaAAGTCGATT
GTGATGACacaaatgacaatacctaaaatgtgacggagcccgattttcga
aaaacattttttccagccgaaaatgccggaaatatgcgggaaaaaccgtt
tttttagcattttctcaagatttcctcattaaattttctgatttttttca
catatatgcgtaatagcaatgcccaaaacttggccgagttcgatttttga
gaaaaattcttttctggccgaaaatgccagaaatataccggaaatcgccg
tttttgcagattttcattggactttttcctattatttctttgtttttttt
cacgaaaaatcaatattgataacaatgctaaCCATCAAGTATGGttcgat
tgtcaataaaactgatttttgatgcgGGGACTTtctaaaagtcgccggaa
cagccgaatatTGCCGGAAAAacgatttttcttgaatttctcgagctgta
ctttatatttctacatcaaattttgcacactgatgcaaaatggcaatacc
tagaaaatgtgacggagcctgatttttgaagaaaaaaatttcagccaaaa
atgccgataatatgccgtcaaaaccggtttgttgccattttctcgagatt
tcattaatcgtttttcccgatttttgcacCAAGATGTGTATCAGCAATCC
CTAAGTGTGGCCGTTTCAgatttttgagaatcatgtTTTCCGACCGAAAA
TGTCGgaagtatgccggaaatcgccgtttttgcagatttgaattgggctt
tttccatatatttctttgttttttcacttaaaaaattattgatNCTAAGT
GTGGCCGTTTCAgatttttgagaatcatgtttttccgaccgaaaatgtcg
gaagtatgccggaaatcgccgtttttgcagatttgaattgggctttttcc
atatatttctttgttttttcacttaaaaattattgataacaatgccacca
tcaagcatgattcaattgtcaataaaacttttgcaattttccaaccggaa
cttttatttcttttttacctaaacccctcccccccatcaaaaatcaatga
tgaaatttaatgcatttttgctaaccgctatattttcttaatgattgttt
ttctccttattgctatctaagtttcatcatcaggtaggtccattcagcat
attgcttgtttctttttaatttgccATATGTACTAAAAGATTCTACAATG
taaagtttttctatttttcatggaGAAAAGGCATTCATCTAATTACTAAT
TAATTTCACTACTTGCttagtttacattttaaaaataatggagataattt
ctaaactttttggaaagttgcaggaattaattatctctgtaatcataatc
aacagaatagcagtatttaaaaaaagactGACCGTCTGCGAAATTCAAGG
GCTGCGTGGACCatctaaacaaaaggaacacAAGACATAAATAACAGGCC
GTtcgttttggttaaaattgttctataaaATAGCGAATCGAACGAATACT
ATGTATGTGATCTTAGCAGATCTTATTtgataaaaggaggaaaagaaaaa
tggagTAACATTTGACATGGAATGAACGtctcaaaaatcaatatttttgg
tGAGATTTCTTAGCGTCACAGATTCTAATGCCCTCGACGTTATTTATGGA
AAGAATCNgttctggtgaaatttcttagcgtcacaGATTCTAATGCCCAT
CGATTTGTAAGTGGCCccttagtagaggcttctttaAAGTTTGGGGAATG
TGAGTCTATAAGAGTTAATTATTTTTCGGTGGAAAAGTGTttgaaaaagc
attttttcgTGCTCAAGGTTTGTCTTCCTTTGCAaaattttgtcttcaat
cttaaatagatgaacaagTATTTCACTAatagttatgattttttcacaga
acatagtaaaactatttgGGAGTTTGaactttttacagaattttaaAAAG
TCTGTTAGTTGTGgagaaaagtttagacattACATTTCTAAACCAAACAG
CTATGGATAAAATCTATCATCGTAATACTTTAGGCATACAAACTTTCata
agcagaaactttcgcaaggtcaaaaaatcgtgaaatttatgacatttACT
TTTGCAAGGTCTCATATACGTGATCTTTACTATATATTCAGCATGTGACC
AGAGCCAACTAAGCAGTCTTTCTAATTTTGGTCGGTAAAGGAGTGCCagc
tatgaaatatttttttgaaatttcgacgtaaaaagtcagttttttttaat
aattttataactcctttttcaaaactaatgctgccgttacaaagcaaaaa
gaGTTAAGTAACAGAtttgagatttccaaaaaatttattgaataaaacGC
TCATGTGTTGATATCTTTCGTTTGATATATggtaaaaatttcactttttt
agtCCCTAGACTATGGTTTACGGACGATTTTTTGTTACTTACCtcttttt
gaaatgaaaaaaggtaACATACAGTACCTCTTTTTTCTAGtcaaattgtt
tcattttttgttaCATACATCTTTTTCAAAAGTATAAGAAGCAAAAAGTT
ACAATCGATAGTGTTGCATACCTCCTTTTAGAgtgtaaaaaatagaaaat
ctttcattttgtaACATACAgcttttcaatttaaaaaaatctagcCACCA
TGTAATATACCTCTTTTGGCAAGGCTAAAATCGGCCCGTTCCGGTTAGAA
TTTATTTCTAATATATGTCGGACTGGAAAGagcatatattttttttaatt
tgtaacTTACCTCTTTTTGTTTTCTAACAGCAGAATGTATGATTGcttaa
aattcaagttagagcatcctctatacgattattaaaaaagaattgacaaa
aaattcaaatcctgaagctcacaatatctctgTCATACTGATGACCCCAT
TTGTGTATAACAttgtaaaatttctttttaaggtTCAAGTGTTTGTCAAT
GTGAAACAGCTCCTCCTCAAAATGAGGCAGAGTCGACCCCTAAAGAAGAG
AATGAAACACCTCAACAAAAAGTAAGAAGCATAAGTCATGATTGAAATCA
AGTTATTTGtggtaaagaaaaatattttttacaaatgtCTGTCGTTAACA
TCACCTTAGCTTTCCTCAATGATAAAGGTGATAATATCTCTATTTCCTTA
GGGAACTATTGGTTTCATTGGGTTGGGTAACATGGGCCACCACATGGGAA
TGAATTTGATAAAGGATGGGTATAACCTTGTTGTCTATGATGTATATCCT
GAAGCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGCTGTCACTTCACC
ACGAATGGTAGCAGAACAAGTCACCAAAATAATAACTATGTTACCTTCAA
GGTAAGAGGGAATTATTGATTATATTTTTACCAATCAATTTAAGCTTTGA
TGAAATAAGTAGTGAAGGTTCTGAATGATATGGAAAGACTCGGTGTTTGG
TTAGAGTTTTaaagaaacaaacaaacattctttattatttttttagccCT
GATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTTGAGGTTTGTTAC
GTTTAACTTCTATCCAATTAAAGAGAATTGTCTAGACAAAATATTGAATT
GCTATAAACAAAACAGTCTGATCTGAGTACCTTTTCTGTTTTCGGACATT
GATGgtacagtgccgtagcaactgggggctatgccccccccccccaataa
ttttttcaaaaatggttattttgcaaaatgcaaagtttttcttttttatt
ttgaaagcattttgttttgagtgcattttcaagcaatctagagcttaaat
tttcaaaattcccccctcgggccaaaccatggttggccctcgcggtgtca
ctaaacttcagccccccccccaataagaaaatgcttcctaTGTGGTATTT
GAAAAGTTTAATCTAAACCATTAATGTTGATTTGCTCTTGAAAATTCAGT
AATTTAACCATCATTTATAGAGGTATGCAGCCAGATACATTAATGATCGA
CAGTAGTACTATAGACCCATCGGCTTCCAAAGAAGTTGCGACAATAGCTG
CCGATGCTGGCGGAACTTACATTGATGCACCTGTATCAGGAGGTAAGTAG
CAGCTGCTTGAAACATCGTGGAAGACTTTCATTTTGATATGTAGATTTTA
AGACTATCCTCTTAGACAGACCCAAAAGCCTTATTTGTTTTTTCTCTATC
ATTAGCTGTTTTGCAAGAATCATTTTAAAAGATGGCTTATCTACGATTTG
ATTCAATCCCCCCCCAGTGCACTGTACCACATGTATCAAATACACTATTA
GAATCGAATCCATTTATCTAACATGAAAATGTACGAGCTATTGACACAAA
TTACCATCTAGATTTTTACAATCTCTTTATGGTTTGGCCCGCTGCAACTG
AAAATCTTGTTGTCGTTTTTAACTTCTCTAGGAGTTGTTGCAGCACGTGA
CGGTGCGTTGACTTTCATGGTGGGTGCAAAACGAGAAGATTTTGAACAAG
CGGAAATCCTACTCACCAGCATGGCCAAAAATGTTGTTCACTGTGGTGCT
ACAGGTACTGGACAGGTATGCACAATAATTATACTAATACCTTAAACCTT
TAATATTTCTGTTTTAAGTcacattttggaattttcatCTCTTTTGGTTC
TGTCACTTCTTGGGTAGCAAGACCTCTATATTAGGTCTCAGGGGATGGCG
TCCCTGCCCATTGCCAGCCAAAAACAACAGAAAGTACAgatcaacaacaa
aacaaaacacttTGGTAGCATGGAATACACTTTGTTTAGTTCCACAGAGA
GTGGCGCCTCTGCCATTTGTGAGCCACAACAACAGCAGCAACAtttcaac
agcaacaacaaattTTGGTAGCAAGAATTTAATCGATTCTCAGAGGTTGG
CGACTCCGCCAGTAGCAagccaccccccccccccccaaaacgTTTGGTAG
CACGAAATAAATTGTTTCTCAGAGCTTGGCGACTCTGCCAAAAGTGAGCC
GAATGTGACGACAAAAAGACTGATCGACAACTCCACTTTTTACCACACGG
GAATTTCTAAAGGTGGACATCATCACACATCATCATCATGAACATTTGGG
ATCAATGCAGTATTTATTGCGATCCTGGTTCAACAACTTTGACGAAAACG
ACGAAGACATTTGACTGAAGAAGAAgacaagaagaaagaagaagaaaaaa
aattcgcaaTATAAACTGTCGAAGAATTCAATGCGAGTTCGAGTTTTATT
GCTGGCTTGTGACAATGACTTTGCAGGAACCTCCCCCTCTCCCCTCCTGC
CTAGTGTCACCAAGCTGTATATTACAATATATTATTTGTAATATTTTAAC
CCCTGACAATTATGACTGAAACGACTGAATTTATAAGAATTatttataca
ttaaatttgacaGACTTATGTTACTTTCTCCGCTGAGGTCTTTACAGGAG
TCCCCCAACGTTTTGGGTcaagctggagcttttacaagGTTTTCGATGAT
TCGGTTGATGGTTGAATcttgagacaaaggattttattgctttttctaaa
gaacgcgtcatctctattatttcaaatgaccaattagtgaagtatcttat
aaaaactccagctcatcccaacgtttttcgtgatggcgtgaatggCGTTA
TTTCAAgttcgtgatttcgtgatttaagattttaaagtacGTGATTGCGT
GATTGTAGGAACTAACGTGTTCAACGCTCTTACAGGTTGAGAGAAGCATT
TTCTAAGACAAACAAGATTTGCTAGTTTAATTAAGGCAGATATTTCTAAA
TCCTTGGCGAcacgaaaagtttttttccgtTGGTGCAattcaacatgctc
catccccaccaacctgaaacgctttcatGCGtctctccaccccattttta
tTTCTACCAATGAAAGTGGAATCGACAtcacttttaataacatttgtgcg
tgtctgggacaaaatcagcgtgtctattgggtatttccctcaatttttgt
cccatgaaacaaaagcAACCATGGGACAACGCAatcttttttcttgtgtt
ggtgggatggagcatgttgcattgcaccaacgcgaaaaaaacttctcgtg
tccccaagccttaagctCTCTTATACGAAACTAAATTATTCGACCCACTT
ATTTTCTTTATACAGGCAGCAAAGATTTGCAACAACATGTTGCTTGCTGT
TTCGATGATTGGGACTGCTGAGGTGATGAACATGGGTACACGACTTGGTC
TAGACAAGAAGATGTTGGCGCACATTCTGAACATCAGTACAGGTCGATGT
TGGTCCAGCGAACTATATAATCCATGTCCTGGTGTTATAGAAGGTGTCCC
ATCCTCCAACGATTATCAAGGTGGCTTCGGTACTCAGCTCATGACTAAGG
TATCTCCATGTTACAAATATGCACATCTGCGTAAAGAAATATCTGAAAGT
ATCAAAAAGTGGCTTCAGTTTCATCCTTATAAAGCTCAGGGACTCCGAAA
CTACGTAAAACCTCTAGATTCTGTATGCGCTGCTTTGGTCAATTGATTGC
AATTTTCtgattgtttttctctttattcCAGGATCTCGGATTAGCTCAAA
ACGCATCGACAGCTACCAAATCAGCAACGCCCATGGGTTCTCTTGCTCAT
CAAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAAAATGGACTTCTC
TTCTGTATACAAGTTCTTAAGAGAAGACTCGTAATTCCCAAAGGTCTTTT
TAGACATTGCTAAAGCATCTAAACATAAGCATATCTATGAAGCTAGATAT
AGATATAGAACTACAATGAACACTCAGACTTTGTTAAGCAAAGACAGCTC
AGAGCCTGGTACTTCGGCAGACTGCACTTCAACGCAGTGGTCgaattttt
atcaatattttctttcttttgcctTTTTGTAATAATAATGAATTTAACTT
TTATTCGGTTTGGTAAATATACAATTTGTAACAAAAATTATTCACTAATA
ATAGTACCCATCCTAGCTGTCAGACTTTCTCTCGATAAGGCATCCTAAAA
CCAATTTGATACATTCTTattaattgtaaattttttctcagattTAGATT
TTGATATCGCTCGTTCTACTGATTTGGGTAGCAGGTGGCTTCGTGCTACC
TAGGGCGTGGCGACCCTACCCTTTTGCGAGCCAATACAAACTTTGACGAT
GACGAAAGGTAGCATGGAATGAACTTTTAGTTCCACAGAGAGTGGTGCCT
CTGCCATTTGTGagccacaacaacaacaacaacgacaacaaACTTTGGTA
GCATGGAGCATTAATTCCACAGAGTTTTGCAACTCTGCCAGTAGCCAGCC
TCGACagaaaacggtttttttggtaGTACGAATTGTTACTTAGCAATCAA
ACCGATTTACGCCATTTCATGACGACTGTGGTGAATGATGAATTAAAACG
AATACTGAATGAATGAATACTTTTATGACGATACTTCACGATGATGAGTA
tgataatgaaaaatgaagatgatgatgatatttcgacatttcaaacaaat
tctTATTCAAGGATTTTGAAATCGATTTCACAAGTACACGAGAGACTATG
TATAACGACGTCTTTTCAAAGGAACCCAAGCGATCTTTGCTTCTTCGTGA
GTTTGATGACTGGTGAACGATATTTACTATGTAacgtaaattttttttaa
tttctgacTCGAGGAAAAGAATTTTCTCATTGAAAAGACGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043320XLOC_043320Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069501-exon-scaffold_501-1491911889:3577..3623TCONS_00069501-exon-scaffold_501-1491911889:3577..3623Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:3577..3623TCONS_00069501-exon-scaffold_501-1510915933:3577..3623Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:3577..3623TCONS_00069501-exon-scaffold_501-1575043694:3577..3623Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:11859..11947TCONS_00069501-exon-scaffold_501-1491911889:11859..11947Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:11859..11947TCONS_00069501-exon-scaffold_501-1510915933:11859..11947Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:11859..11947TCONS_00069501-exon-scaffold_501-1575043694:11859..11947Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:12078..12277TCONS_00069501-exon-scaffold_501-1491911889:12078..12277Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:12078..12277TCONS_00069501-exon-scaffold_501-1510915933:12078..12277Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:12078..12277TCONS_00069501-exon-scaffold_501-1575043694:12078..12277Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:12423..12467TCONS_00069501-exon-scaffold_501-1491911889:12423..12467Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:12423..12467TCONS_00069501-exon-scaffold_501-1510915933:12423..12467Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:12423..12467TCONS_00069501-exon-scaffold_501-1575043694:12423..12467Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:12897..13018TCONS_00069501-exon-scaffold_501-1491911889:12897..13018Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:12897..13018TCONS_00069501-exon-scaffold_501-1510915933:12897..13018Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:12897..13018TCONS_00069501-exon-scaffold_501-1575043694:12897..13018Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:13358..13491TCONS_00069501-exon-scaffold_501-1491911889:13358..13491Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:13358..13491TCONS_00069501-exon-scaffold_501-1510915933:13358..13491Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:13358..13491TCONS_00069501-exon-scaffold_501-1575043694:13358..13491Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:15092..15325TCONS_00069501-exon-scaffold_501-1491911889:15092..15325Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:15092..15325TCONS_00069501-exon-scaffold_501-1510915933:15092..15325Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:15092..15325TCONS_00069501-exon-scaffold_501-1575043694:15092..15325Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:15508..15562TCONS_00069501-exon-scaffold_501-1491911889:15508..15562Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:15508..15562TCONS_00069501-exon-scaffold_501-1510915933:15508..15562Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:15508..15562TCONS_00069501-exon-scaffold_501-1575043694:15508..15562Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1491911889:16018..16668TCONS_00069501-exon-scaffold_501-1491911889:16018..16668Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1510915933:16018..16668TCONS_00069501-exon-scaffold_501-1510915933:16018..16668Clytia hemisphaericaexon
TCONS_00069501-exon-scaffold_501-1575043694:16018..16668TCONS_00069501-exon-scaffold_501-1575043694:16018..16668Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_501supercontigscaffold_501:3577..16668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0239125	0.0209557	2.08085	1.45085e-05	16.0225	6.69651	1.34004e-07	1.4526	0.529274	11.4528	0.00503679	11.5549	6.41602e-06	1.70637e-08	2.74551e-06	1.40515	3.14669	3.05995	3.73552e-05	3.73842e-05	4.82082	8.09904	0.000194823	0.134856	0	6.42595	5.71567e-09	0.000415823	0.00034893	2.62978
Blast
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BLAST of TCONS_00069501 vs. Swiss-Prot (Human)
Match: 3HIDH (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2)

HSP 1 Score: 313.923 bits (803), Expect = 7.352e-102
Identity = 149/239 (62.34%), Postives = 188/239 (78.66%), Query Frame = 2 
Query:  197 KDGYNLVVYDVYPEAMKPFKELGSTAVTSPRMVAEQVTKIITMLPSSPDVFEAYNGDQGILRGMQPDTLMIDSSTIDPSASKEVATIAADAGGTYIDAPVSGGVVAARDGALTFMVGAKREDFEQAEILLTSMAKNVVHCGATGTGQAAKICNNMLLAVSMIGTAEVMNMGTRLGLDKKMLAHILNISTGRCWSSELYNPCPGVIEGVPSSNDYQGGFGTQLMTKDLGLAQNASTATKS 913
            K GY L++YDV+P+A K F++ G   V+SP  VAE+  +IITMLP+S +  EAY+G  GIL+ ++  +L+IDSSTIDP+ SKE+A      G  ++DAPVSGGV AAR G LTFMVG   ++F  A+ LL  M  NVV+CGA GTGQAAKICNNMLLA+SMIGTAE MN+G RLGLD K+LA ILN+S+GRCWSS+ YNP PGV++GVPS+N+YQGGFGT LM KDLGLAQ+++T+TKS
Sbjct:   60 KHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKS 298
The following BLAST results are available for this feature:
BLAST of TCONS_00069501 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
3HIDH7.352e-10262.343-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
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