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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069500 ID=TCONS_00069500|Name=TCONS_00069500|organism=Clytia hemisphaerica|type=transcript|length=2094bp
TTTCGCACGTCTGCCCGCAGTTGGAAAAAGGGGCGCACTTGCTCGCTGCG
CTCGGTCGTGTGTAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCG
GTATATCTAgtTCAAGTGTTTGTCAATGTGAAACAGCTCCTCCTCAAAAT
GAGGCAGAGTCGACCCCTAAAGAAGAGAATGAAACACCTCAACAAAAAGG
AACTATTGGTTTCATTGGGTTGGGTAACATGGGCCACCACATGGGAATGA
ATTTGATAAAGGATGGGTATAACCTTGTTGTCTATGATGTATATCCTGAA
GCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGCTGTCACTTCACCACG
AATGGTAGCAGAACAAGTCACCAAAATAATAACTATGTTACCTTCAAGcc
CTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTTGAGAGGTATG
CAGCCAGATACATTAATGATCGACAGTAGTACTATAGACCCATCGGCTTC
CAAAGAAGTTGCGACAATAGCTGCCGATGCTGGCGGAACTTACATTGATG
CACCTGTATCAGGAGGAGTTGTTGCAGCACGTGACGGTGCGTTGACTTTC
ATGGTGGGTGCAAAACGAGAAGATTTTGAACAAGCGGAAATCCTACTCAC
CAGCATGGCCAAAAATGTTGTTCACTGTGGTGCTACAGGTACTGGACAGG
CAGCAAAGATTTGCAACAACATGTTGCTTGCTGTTTCGATGATTGGGACT
GCTGAGGTGATGAACATGGGTACACGACTTGGTCTAGACAAGAAGATGTT
GGCGCACATTCTGAACATCAGTACAGGTCGATGTTGGTCCAGCGAACTAT
ATAATCCATGTCCTGGTGTTATAGAAGGTGTCCCATCCTCCAACGATTAT
CAAGGTGGCTTCGGTACTCAGCTCATGACTAAGGATCTCGGATTAGCTCA
AAACGCATCGACAGCTACCAAATCAGCAACGCCCATGGGTTCTCTTGCTC
ATCAAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAAAATGGACTTC
TCTTCTGTATACAAGTTCTTAAGAGAAGACTCGTAATTCCCAAAGGTCTT
TTTAGACATTGCTAAAGCATCTAAACATAAGCATATCTATGAAGCTAGAT
ATAGATATAGAACTACAATGAACACTCAGACTTTGTTAAGCAAAGACAGC
TCAGAGCCTGGTACTTCGGCAGACTGCACTTCAACGCAGTGGTCgaattt
ttatcaatattttctttcttttgcctTTTTGTAATAATAATGAATTTAAC
TTTTATTCGGTTTGGTAAATATACAATTTGTAACAAAAATTATTCACTAA
TAATAGTACCCATCCTAGCTGTCAGACTTTCTCTCGATAAGGCATCCTAA
AACCAATTTGATACATTCTTattaattgtaaattttttctcagattTAGA
TTTTGATATCGCTCGTTCTACTGATTTGGGTAGCAGGTGGCTTCGTGCTA
CCTAGGGCGTGGCGACCCTACCCTTTTGCGAGCCAATACAAACTTTGACG
ATGACGAAAGGTAGCATGGAATGAACTTTTAGTTCCACAGAGAGTGGTGC
CTCTGCCATTTGTGagccacaacaacaacaacaacgacaacaaACTTTGG
TAGCATGGAGCATTAATTCCACAGAGTTTTGCAACTCTGCCAGTAGCCAG
CCTCGACagaaaacggtttttttggtaGTACGAATTGTTACTTAGCAATC
AAACCGATTTACGCCATTTCATGACGACTGTGGTGAATGATGAATTAAAA
CGAATACTGAATGAATGAATACTTTTATGACGATACTTCACGATGATGAG
TAtgataatgaaaaatgaagatgatgatgatatttcgacatttcaaacaa
attctTATTCAAGGATTTTGAAATCGATTTCACAAGTACACGAGAGACTA
TGTATAACGACGTCTTTTCAAAGGAACCCAAGCGATCTTTGCTTCTTCGT
GAGTTTGATGACTGGTGAACGATATTTACTATGTAacgtaaatttttttt
aatttctgacTCGAGGAAAAGAATTTTCTCATTGAAAAGACGTG Run BLAST on NCBI transcript from alignment at scaffold_501:3515..16668+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069500 ID=TCONS_00069500|Name=TCONS_00069500|organism=Clytia hemisphaerica|type=transcript|length=13154bp|location=Sequence derived from alignment at scaffold_501:3515..16668+ (Clytia hemisphaerica)
TTTCGCACGTCTGCCCGCAGTTGGAAAAAGGGGCGCACTTGCTCGCTGCG
CTCGGTCGTGTGTAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCG
GTATATCTAGTAAGCGTTTTCTTTTCTTAGTTTCCTCTTCACCTGGGGGG
GGGTAAAATATGTTccaaattcaataattttcaagatgGTTATCTGACAT
TGCAGTAGCAGGGTAGACTTTtaattattttggaaaatttgccaatttca
ccgaacctccaaagtcatttgatttgatttaatgaacgacgtattaaaaa
atacacgatttctcttctgcaccgagtaggcttttaaatcgaaatatgaa
aaaaatccatagtggaacacacgcaagtgtctgtgcactctaagaggata
aacttggtggagttatcataacaaatttgttgtcaaaagaGATTTAAGAG
TAAGTGAAAacacaggccagatatcaaccagtcccatgtttcaaccaatc
gtcccaagttagagctgcCCAAGTTGACGGTATTTTGTTCCAGACGATCG
TAATCGATACACAGCCGTTTGCGTCACGCGTGTTCCAAAaggcaaaacaa
tggaaatgtgTCAATCCGTTCAGCtggcaaaaatggcaaaaatacaaaat
gttCGTCGCAAATaccttttcacaaaaaataaacCCAGAGATATATGTCT
GGAATCAAAAATCTattgttaaatatttcccgttttccaaaaaggaaata
tttgttaaaacgggctttcttcTCCATTTTCAgatgtcaaaacgccttcc
atacgccctgactgacgcccgttttagcgcctaaagaaagtttactttat
aagaatcaaatcaaaaactcttgattgaaggcaatatatctttcggtaat
tagttattagaaagtaaacaaaagatggcgaaaaagaaaagcatatttat
ttttattataagcatctacattataagaatcaaattaattactcttgatt
gaaggcaacatgcctttcggtaattagttcttgcaAAGTAAACAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatta
taagtgtctactttataagaatcaaatcaatttcagaatttttggcgttT
CCACTGCGATaacatgtgagcgataacttctctatttgagatgtgagcga
ccgtctatcgcatgtcatctcaaaagtaaagttgaaacaagctttcttcc
tccgactcaaattttatcgataaaacgaatttaaaatctacacatgggtt
attttgcttacttagggatatttcgataggaagctctgcgggacattctt
agcgacagctacttgctagtatatgtcaataatgaccttcacttttaagg
aaatatttagtcgcaattttgtgattttcgttttcatttttcattgctta
tTTCTTTTCGCCCTATcgcaaataaaacaataggttTTTAATCCCAGACG
TTTgtcttgatttattttttgcgacAAACAAATTTGCGATGaacttattt
tttcaaatggacACCCAGCTTAAGGGCTTTTTTATAGCCAAACAGAATTA
CCATAGGCATAGCTTTACCAAAATAATTATATGAAAGGTacaatttcagc
cattttcagccaaatccaacaatTTTTCTTGCTTGTGCTTTATGGAAACT
TATATTCTGTCCATGTGTAAACATTCCCGTATGTTCTGATGTACTTGACT
ACCGGTTTTCAAACCCGGATAAGGGGTACTGCAATAAAAGTTCCACCTCC
CAAGGTGACTTTCTTTGCCAataatttttgatagaattgtTCTCCTAATT
TCCCCCTTTCAGTAGGTCTTCCTCTATCTTATATGCTTcagaaaaccaaa
aacattgtcCTAAAAGCTTAGCCTCACAAAGCCCGCAGCTTATAATATAA
CCCCCTGGTTGAAGCTTTGTATTCTTATCCTATAAATATAACAGAACAGT
CATTCTACAGAAATGGCTGTCACgccagtttgcagagtgtgACGTGTTTG
CTTGTTATCTGAAAAAGTTGAGAgcaggtgcaaaatttgaggttttcagg
tgTTTAAGTGCAGACTGATGTTTTTTAACCCTGACTGTAAAGTTTTGCTA
TTTTCTCCTCAAGTGcagctaattttagcaattttttgcctttttgggcc
aatttctGAGGTATAGGTGCACCTTGTCCAGACCAAAATTTATCACGTGC
GCTCTTCCAGTGCGGAACTTGGTATTTCCGAATTTTTCCTTGAGAGCAGC
CTTGtcatactctgcaaactggctgTCACGTGACTTTTTTTCTACCGCAT
GATACAAATCACGCATTTTCCTTTGATGTTGGAAATTTTCACATGACAAG
AAGTTCGGACTTCACATTAAAAAACAATGTATATAGATTATGGAAAGGAT
TCAgtttatttaaaggttttaattattggacctacctccgggtgccccgg
tggccggaaaaaccgggtttttaggtattttcttgaaatttcatcataag
tttttgtgattttttgcacaaagatgcgtattaacaatgcccaaaacatg
gccgagtctgatttttgagaaaaaaaaattttctggcttgatatgccgga
aatcgccgtttttctggattttcattggactttttccttataatcagttg
ttttttcattcaaaaacattattaatagcaatgcccatcatcatgcatgt
tttaattttcaataaaattgatttttgaaaccggaactatttaaaaattg
ccggaacaacctattttcgccggaaatacagtatttcttgaacttctcga
gctgtactttatatttttttatgaaattttgcacactgatgcaaaatgtg
tCATCACAAGCGATTCGAAGTACAAATGAATTGGAACGTTCTCACGTTCC
ATAGCGTTCCTTGGAACGTTCTAAATCGTTCCAGAACGTTCAGAAACGTT
TCAGAACGTTCAGGAACGATCTAGAACGTTTTAGGAACGCTATGGAACGT
TCCAAAAGCGTCCAAAAGCTAATAGATTACTCAATAAGAACGTTAGGGAA
CGATTTTGAACGTACAGGACGTTCGTGAACGTTCTTCTGCAATGTTTCTG
AACGTTTCAAGACACTCCTAAACTAGTAGTAAATAACAGGGAACGATCAG
GAACGTTGAAGAACGTTCTCTGGCGTTCTAACAACGTTTCTAAACGTTCG
AGAACGTTCCCTATCGTTCGTTTTGCTAGAacgttccattttatttgtat
ttaAAGTCGATTGTGATGACacaaatgacaatacctaaaatgtgacggag
cccgattttcgaaaaacattttttccagccgaaaatgccggaaatatgcg
ggaaaaaccgtttttttagcattttctcaagatttcctcattaaattttc
tgatttttttcacatatatgcgtaatagcaatgcccaaaacttggccgag
ttcgatttttgagaaaaattcttttctggccgaaaatgccagaaatatac
cggaaatcgccgtttttgcagattttcattggactttttcctattatttc
tttgttttttttcacgaaaaatcaatattgataacaatgctaaCCATCAA
GTATGGttcgattgtcaataaaactgatttttgatgcgGGGACTTtctaa
aagtcgccggaacagccgaatatTGCCGGAAAAacgatttttcttgaatt
tctcgagctgtactttatatttctacatcaaattttgcacactgatgcaa
aatggcaatacctagaaaatgtgacggagcctgatttttgaagaaaaaaa
tttcagccaaaaatgccgataatatgccgtcaaaaccggtttgttgccat
tttctcgagatttcattaatcgtttttcccgatttttgcacCAAGATGTG
TATCAGCAATCCCTAAGTGTGGCCGTTTCAgatttttgagaatcatgtTT
TCCGACCGAAAATGTCGgaagtatgccggaaatcgccgtttttgcagatt
tgaattgggctttttccatatatttctttgttttttcacttaaaaaatta
ttgatNCTAAGTGTGGCCGTTTCAgatttttgagaatcatgtttttccga
ccgaaaatgtcggaagtatgccggaaatcgccgtttttgcagatttgaat
tgggctttttccatatatttctttgttttttcacttaaaaattattgata
acaatgccaccatcaagcatgattcaattgtcaataaaacttttgcaatt
ttccaaccggaacttttatttcttttttacctaaacccctcccccccatc
aaaaatcaatgatgaaatttaatgcatttttgctaaccgctatattttct
taatgattgtttttctccttattgctatctaagtttcatcatcaggtagg
tccattcagcatattgcttgtttctttttaatttgccATATGTACTAAAA
GATTCTACAATGtaaagtttttctatttttcatggaGAAAAGGCATTCAT
CTAATTACTAATTAATTTCACTACTTGCttagtttacattttaaaaataa
tggagataatttctaaactttttggaaagttgcaggaattaattatctct
gtaatcataatcaacagaatagcagtatttaaaaaaagactGACCGTCTG
CGAAATTCAAGGGCTGCGTGGACCatctaaacaaaaggaacacAAGACAT
AAATAACAGGCCGTtcgttttggttaaaattgttctataaaATAGCGAAT
CGAACGAATACTATGTATGTGATCTTAGCAGATCTTATTtgataaaagga
ggaaaagaaaaatggagTAACATTTGACATGGAATGAACGtctcaaaaat
caatatttttggtGAGATTTCTTAGCGTCACAGATTCTAATGCCCTCGAC
GTTATTTATGGAAAGAATCNgttctggtgaaatttcttagcgtcacaGAT
TCTAATGCCCATCGATTTGTAAGTGGCCccttagtagaggcttctttaAA
GTTTGGGGAATGTGAGTCTATAAGAGTTAATTATTTTTCGGTGGAAAAGT
GTttgaaaaagcattttttcgTGCTCAAGGTTTGTCTTCCTTTGCAaaat
tttgtcttcaatcttaaatagatgaacaagTATTTCACTAatagttatga
ttttttcacagaacatagtaaaactatttgGGAGTTTGaactttttacag
aattttaaAAAGTCTGTTAGTTGTGgagaaaagtttagacattACATTTC
TAAACCAAACAGCTATGGATAAAATCTATCATCGTAATACTTTAGGCATA
CAAACTTTCataagcagaaactttcgcaaggtcaaaaaatcgtgaaattt
atgacatttACTTTTGCAAGGTCTCATATACGTGATCTTTACTATATATT
CAGCATGTGACCAGAGCCAACTAAGCAGTCTTTCTAATTTTGGTCGGTAA
AGGAGTGCCagctatgaaatatttttttgaaatttcgacgtaaaaagtca
gttttttttaataattttataactcctttttcaaaactaatgctgccgtt
acaaagcaaaaagaGTTAAGTAACAGAtttgagatttccaaaaaatttat
tgaataaaacGCTCATGTGTTGATATCTTTCGTTTGATATATggtaaaaa
tttcacttttttagtCCCTAGACTATGGTTTACGGACGATTTTTTGTTAC
TTACCtctttttgaaatgaaaaaaggtaACATACAGTACCTCTTTTTTCT
AGtcaaattgtttcattttttgttaCATACATCTTTTTCAAAAGTATAAG
AAGCAAAAAGTTACAATCGATAGTGTTGCATACCTCCTTTTAGAgtgtaa
aaaatagaaaatctttcattttgtaACATACAgcttttcaatttaaaaaa
atctagcCACCATGTAATATACCTCTTTTGGCAAGGCTAAAATCGGCCCG
TTCCGGTTAGAATTTATTTCTAATATATGTCGGACTGGAAAGagcatata
ttttttttaatttgtaacTTACCTCTTTTTGTTTTCTAACAGCAGAATGT
ATGATTGcttaaaattcaagttagagcatcctctatacgattattaaaaa
agaattgacaaaaaattcaaatcctgaagctcacaatatctctgTCATAC
TGATGACCCCATTTGTGTATAACAttgtaaaatttctttttaaggtTCAA
GTGTTTGTCAATGTGAAACAGCTCCTCCTCAAAATGAGGCAGAGTCGACC
CCTAAAGAAGAGAATGAAACACCTCAACAAAAAGTAAGAAGCATAAGTCA
TGATTGAAATCAAGTTATTTGtggtaaagaaaaatattttttacaaatgt
CTGTCGTTAACATCACCTTAGCTTTCCTCAATGATAAAGGTGATAATATC
TCTATTTCCTTAGGGAACTATTGGTTTCATTGGGTTGGGTAACATGGGCC
ACCACATGGGAATGAATTTGATAAAGGATGGGTATAACCTTGTTGTCTAT
GATGTATATCCTGAAGCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGC
TGTCACTTCACCACGAATGGTAGCAGAACAAGTCACCAAAATAATAACTA
TGTTACCTTCAAGGTAAGAGGGAATTATTGATTATATTTTTACCAATCAA
TTTAAGCTTTGATGAAATAAGTAGTGAAGGTTCTGAATGATATGGAAAGA
CTCGGTGTTTGGTTAGAGTTTTaaagaaacaaacaaacattctttattat
ttttttagccCTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTT
GAGGTTTGTTACGTTTAACTTCTATCCAATTAAAGAGAATTGTCTAGACA
AAATATTGAATTGCTATAAACAAAACAGTCTGATCTGAGTACCTTTTCTG
TTTTCGGACATTGATGgtacagtgccgtagcaactgggggctatgccccc
cccccccaataattttttcaaaaatggttattttgcaaaatgcaaagttt
ttcttttttattttgaaagcattttgttttgagtgcattttcaagcaatc
tagagcttaaattttcaaaattcccccctcgggccaaaccatggttggcc
ctcgcggtgtcactaaacttcagccccccccccaataagaaaatgcttcc
taTGTGGTATTTGAAAAGTTTAATCTAAACCATTAATGTTGATTTGCTCT
TGAAAATTCAGTAATTTAACCATCATTTATAGAGGTATGCAGCCAGATAC
ATTAATGATCGACAGTAGTACTATAGACCCATCGGCTTCCAAAGAAGTTG
CGACAATAGCTGCCGATGCTGGCGGAACTTACATTGATGCACCTGTATCA
GGAGGTAAGTAGCAGCTGCTTGAAACATCGTGGAAGACTTTCATTTTGAT
ATGTAGATTTTAAGACTATCCTCTTAGACAGACCCAAAAGCCTTATTTGT
TTTTTCTCTATCATTAGCTGTTTTGCAAGAATCATTTTAAAAGATGGCTT
ATCTACGATTTGATTCAATCCCCCCCCAGTGCACTGTACCACATGTATCA
AATACACTATTAGAATCGAATCCATTTATCTAACATGAAAATGTACGAGC
TATTGACACAAATTACCATCTAGATTTTTACAATCTCTTTATGGTTTGGC
CCGCTGCAACTGAAAATCTTGTTGTCGTTTTTAACTTCTCTAGGAGTTGT
TGCAGCACGTGACGGTGCGTTGACTTTCATGGTGGGTGCAAAACGAGAAG
ATTTTGAACAAGCGGAAATCCTACTCACCAGCATGGCCAAAAATGTTGTT
CACTGTGGTGCTACAGGTACTGGACAGGTATGCACAATAATTATACTAAT
ACCTTAAACCTTTAATATTTCTGTTTTAAGTcacattttggaattttcat
CTCTTTTGGTTCTGTCACTTCTTGGGTAGCAAGACCTCTATATTAGGTCT
CAGGGGATGGCGTCCCTGCCCATTGCCAGCCAAAAACAACAGAAAGTACA
gatcaacaacaaaacaaaacacttTGGTAGCATGGAATACACTTTGTTTA
GTTCCACAGAGAGTGGCGCCTCTGCCATTTGTGAGCCACAACAACAGCAG
CAACAtttcaacagcaacaacaaattTTGGTAGCAAGAATTTAATCGATT
CTCAGAGGTTGGCGACTCCGCCAGTAGCAagccaccccccccccccccaa
aacgTTTGGTAGCACGAAATAAATTGTTTCTCAGAGCTTGGCGACTCTGC
CAAAAGTGAGCCGAATGTGACGACAAAAAGACTGATCGACAACTCCACTT
TTTACCACACGGGAATTTCTAAAGGTGGACATCATCACACATCATCATCA
TGAACATTTGGGATCAATGCAGTATTTATTGCGATCCTGGTTCAACAACT
TTGACGAAAACGACGAAGACATTTGACTGAAGAAGAAgacaagaagaaag
aagaagaaaaaaaattcgcaaTATAAACTGTCGAAGAATTCAATGCGAGT
TCGAGTTTTATTGCTGGCTTGTGACAATGACTTTGCAGGAACCTCCCCCT
CTCCCCTCCTGCCTAGTGTCACCAAGCTGTATATTACAATATATTATTTG
TAATATTTTAACCCCTGACAATTATGACTGAAACGACTGAATTTATAAGA
ATTatttatacattaaatttgacaGACTTATGTTACTTTCTCCGCTGAGG
TCTTTACAGGAGTCCCCCAACGTTTTGGGTcaagctggagcttttacaag
GTTTTCGATGATTCGGTTGATGGTTGAATcttgagacaaaggattttatt
gctttttctaaagaacgcgtcatctctattatttcaaatgaccaattagt
gaagtatcttataaaaactccagctcatcccaacgtttttcgtgatggcg
tgaatggCGTTATTTCAAgttcgtgatttcgtgatttaagattttaaagt
acGTGATTGCGTGATTGTAGGAACTAACGTGTTCAACGCTCTTACAGGTT
GAGAGAAGCATTTTCTAAGACAAACAAGATTTGCTAGTTTAATTAAGGCA
GATATTTCTAAATCCTTGGCGAcacgaaaagtttttttccgtTGGTGCAa
ttcaacatgctccatccccaccaacctgaaacgctttcatGCGtctctcc
accccatttttatTTCTACCAATGAAAGTGGAATCGACAtcacttttaat
aacatttgtgcgtgtctgggacaaaatcagcgtgtctattgggtatttcc
ctcaatttttgtcccatgaaacaaaagcAACCATGGGACAACGCAatctt
ttttcttgtgttggtgggatggagcatgttgcattgcaccaacgcgaaaa
aaacttctcgtgtccccaagccttaagctCTCTTATACGAAACTAAATTA
TTCGACCCACTTATTTTCTTTATACAGGCAGCAAAGATTTGCAACAACAT
GTTGCTTGCTGTTTCGATGATTGGGACTGCTGAGGTGATGAACATGGGTA
CACGACTTGGTCTAGACAAGAAGATGTTGGCGCACATTCTGAACATCAGT
ACAGGTCGATGTTGGTCCAGCGAACTATATAATCCATGTCCTGGTGTTAT
AGAAGGTGTCCCATCCTCCAACGATTATCAAGGTGGCTTCGGTACTCAGC
TCATGACTAAGGTATCTCCATGTTACAAATATGCACATCTGCGTAAAGAA
ATATCTGAAAGTATCAAAAAGTGGCTTCAGTTTCATCCTTATAAAGCTCA
GGGACTCCGAAACTACGTAAAACCTCTAGATTCTGTATGCGCTGCTTTGG
TCAATTGATTGCAATTTTCtgattgtttttctctttattcCAGGATCTCG
GATTAGCTCAAAACGCATCGACAGCTACCAAATCAGCAACGCCCATGGGT
TCTCTTGCTCATCAAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAA
AATGGACTTCTCTTCTGTATACAAGTTCTTAAGAGAAGACTCGTAATTCC
CAAAGGTCTTTTTAGACATTGCTAAAGCATCTAAACATAAGCATATCTAT
GAAGCTAGATATAGATATAGAACTACAATGAACACTCAGACTTTGTTAAG
CAAAGACAGCTCAGAGCCTGGTACTTCGGCAGACTGCACTTCAACGCAGT
GGTCgaatttttatcaatattttctttcttttgcctTTTTGTAATAATAA
TGAATTTAACTTTTATTCGGTTTGGTAAATATACAATTTGTAACAAAAAT
TATTCACTAATAATAGTACCCATCCTAGCTGTCAGACTTTCTCTCGATAA
GGCATCCTAAAACCAATTTGATACATTCTTattaattgtaaattttttct
cagattTAGATTTTGATATCGCTCGTTCTACTGATTTGGGTAGCAGGTGG
CTTCGTGCTACCTAGGGCGTGGCGACCCTACCCTTTTGCGAGCCAATACA
AACTTTGACGATGACGAAAGGTAGCATGGAATGAACTTTTAGTTCCACAG
AGAGTGGTGCCTCTGCCATTTGTGagccacaacaacaacaacaacgacaa
caaACTTTGGTAGCATGGAGCATTAATTCCACAGAGTTTTGCAACTCTGC
CAGTAGCCAGCCTCGACagaaaacggtttttttggtaGTACGAATTGTTA
CTTAGCAATCAAACCGATTTACGCCATTTCATGACGACTGTGGTGAATGA
TGAATTAAAACGAATACTGAATGAATGAATACTTTTATGACGATACTTCA
CGATGATGAGTAtgataatgaaaaatgaagatgatgatgatatttcgaca
tttcaaacaaattctTATTCAAGGATTTTGAAATCGATTTCACAAGTACA
CGAGAGACTATGTATAACGACGTCTTTTCAAAGGAACCCAAGCGATCTTT
GCTTCTTCGTGAGTTTGATGACTGGTGAACGATATTTACTATGTAacgta
aattttttttaatttctgacTCGAGGAAAAGAATTTTCTCATTGAAAAGA
CGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069500-exon-scaffold_501-1491911889:3515..3623 | TCONS_00069500-exon-scaffold_501-1491911889:3515..3623 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:3515..3623 | TCONS_00069500-exon-scaffold_501-1510915933:3515..3623 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:3515..3623 | TCONS_00069500-exon-scaffold_501-1575043694:3515..3623 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:11859..11947 | TCONS_00069500-exon-scaffold_501-1491911889:11859..11947 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:11859..11947 | TCONS_00069500-exon-scaffold_501-1510915933:11859..11947 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:11859..11947 | TCONS_00069500-exon-scaffold_501-1575043694:11859..11947 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:12078..12277 | TCONS_00069500-exon-scaffold_501-1491911889:12078..12277 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:12078..12277 | TCONS_00069500-exon-scaffold_501-1510915933:12078..12277 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:12078..12277 | TCONS_00069500-exon-scaffold_501-1575043694:12078..12277 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:12423..12467 | TCONS_00069500-exon-scaffold_501-1491911889:12423..12467 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:12423..12467 | TCONS_00069500-exon-scaffold_501-1510915933:12423..12467 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:12423..12467 | TCONS_00069500-exon-scaffold_501-1575043694:12423..12467 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:12897..13018 | TCONS_00069500-exon-scaffold_501-1491911889:12897..13018 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:12897..13018 | TCONS_00069500-exon-scaffold_501-1510915933:12897..13018 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:12897..13018 | TCONS_00069500-exon-scaffold_501-1575043694:12897..13018 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:13358..13491 | TCONS_00069500-exon-scaffold_501-1491911889:13358..13491 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:13358..13491 | TCONS_00069500-exon-scaffold_501-1510915933:13358..13491 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:13358..13491 | TCONS_00069500-exon-scaffold_501-1575043694:13358..13491 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:15092..15325 | TCONS_00069500-exon-scaffold_501-1491911889:15092..15325 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:15092..15325 | TCONS_00069500-exon-scaffold_501-1510915933:15092..15325 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:15092..15325 | TCONS_00069500-exon-scaffold_501-1575043694:15092..15325 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1491911889:15508..16668 | TCONS_00069500-exon-scaffold_501-1491911889:15508..16668 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1510915933:15508..16668 | TCONS_00069500-exon-scaffold_501-1510915933:15508..16668 | Clytia hemisphaerica | exon |
| TCONS_00069500-exon-scaffold_501-1575043694:15508..16668 | TCONS_00069500-exon-scaffold_501-1575043694:15508..16668 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_501 | supercontig | scaffold_501:3515..16668 + |
Blast
BLAST of TCONS_00069500 vs. Swiss-Prot (Human)
Match: 3HIDH (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2) HSP 1 Score: 367.851 bits (943), Expect = 1.021e-120 Identity = 186/298 (62.42%), Postives = 234/298 (78.52%), Query Frame = 1
Query: 196 KGTIGFXXXXXXXXXXXXXXXKDGYNLVVYDVYPEAMKPFKELGSTAVTSPRMVAEQVTKIITMLPSSPDVFEAYNGDQGILRGMQPDTLMIDSSTIDPSASKEVATIAADAGGTYIDAPVSGGVVAARDGALTFMVGAKREDFEQAEILLTSMAKNVVHCGATGTGQAAKICNNMLLAVSMIGTAEVMNMGTRLGLDKKMLAHILNISTGRCWSSELYNPCPGVIEGVPSSNDYQGGFGTQLMTKDLGLAQNASTATKSATPMGSLAHQIYRVMCNSGYAKMDFSSVYKFLREDS*F 1089
K +GFIGLGNMG+ M NL+K GY L++YDV+P+A K F++ G V+SP VAE+ +IITMLP+S + EAY+G GIL+ ++ +L+IDSSTIDP+ SKE+A G ++DAPVSGGV AAR G LTFMVG ++F A+ LL M NVV+CGA GTGQAAKICNNMLLA+SMIGTAE MN+G RLGLD K+LA ILN+S+GRCWSS+ YNP PGV++GVPS+N+YQGGFGT LM KDLGLAQ+++T+TKS +GSLAHQIYR+MC GY+K DFSSV++FLRE+ F
Sbjct: 39 KTPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREEETF 336
The following BLAST results are available for this feature:
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