TCONS_00069499 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069499
Unique NameTCONS_00069499
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1746

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069499 ID=TCONS_00069499|Name=TCONS_00069499|organism=Clytia hemisphaerica|type=transcript|length=1746bp
TTTCGCACGTCTGCCCGCAGTTGGAAAAAGGGGCGCACTTGCTCGCTGCG
CTCGGTCGTGTGTAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCG
GTATATCTAgtTCAAGTGTTTGTCAATGTGAAACAGCTCCTCCTCAAAAT
GAGGCAGAGTCGACCCCTAAAGAAGAGAATGAAACACCTCAACAAAAAGG
AACTATTGGTTTCATTGGGTTGGGTAACATGGGCCACCACATGGGAATGA
ATTTGATAAAGGATGGGTATAACCTTGTTGTCTATGATGTATATCCTGAA
GCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGCTGTCACTTCACCACG
AATGGTAGCAGAACAAGTCACCAAAATAATAACTATGTTACCTTCAAGcc
CTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTTGAGAGGTATG
CAGCCAGATACATTAATGATCGACAGTAGTACTATAGACCCATCGGCTTC
CAAAGAAGTTGCGACAATAGCTGCCGATGCTGGCGGAACTTACATTGATG
CACCTGTATCAGGAGGAGTTGTTGCAGCACGTGACGGTGCGTTGACTTTC
ATGGTGGGTGCAAAACGAGAAGATTTTGAACAAGCGGAAATCCTACTCAC
CAGCATGGCCAAAAATGTTGTTCACTGTGGTGCTACAGGTACTGGACAGG
CAGCAAAGATTTGCAACAACATGTTGCTTGCTGTTTCGATGATTGGGACT
GCTGAGGTGATGAACATGGGTACACGACTTGGTCTAGACAAGAAGATGTT
GGCGCACATTCTGAACATCAGTACAGGTCGATGTTGGTCCAGCGAACTAT
ATAATCCATGTCCTGGTGTTATAGAAGGTGTCCCATCCTCCAACGATTAT
CAAGGTGGCTTCGGTACTCAGCTCATGACTAAGGATCTCGGATTAGCTCA
AAACGCATCGACAGCTACCAAATCAGCAACGCCCATGGGTTCTCTTGCTC
ATCAAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAAAATGGACTTC
TCTTCTGTATACAAGTTCTTAAGAGAAGACTCGTAATTCCCAAAGattTA
GATTTTGATATCGCTCGTTCTACTGATTTGGGTAGCAGGTGGCTTCGTGC
TACCTAGGGCGTGGCGACCCTACCCTTTTGCGAGCCAATACAAACTTTGA
CGATGACGAAAGGTAGCATGGAATGAACTTTTAGTTCCACAGAGAGTGGT
GCCTCTGCCATTTGTGagccacaacaacaacaacaacgacaacaaACTTT
GGTAGCATGGAGCATTAATTCCACAGAGTTTTGCAACTCTGCCAGTAGCC
AGCCTCGACagaaaacggtttttttggtaGTACGAATTGTTACTTAGCAA
TCAAACCGATTTACGCCATTTCATGACGACTGTGGTGAATGATGAATTAA
AACGAATACTGAATGAATGAATACTTTTATGACGATACTTCACGATGATG
AGTAtgataatgaaaaatgaagatgatgatgatatttcgacatttcaaac
aaattctTATTCAAGGATTTTGAAATCGATTTCACAAGTACACGAGAGAC
TATGTATAACGACGTCTTTTCAAAGGAACCCAAGCGATCTTTGCTTCTTC
GTGAGTTTGATGACTGGTGAACGATATTTACTATGTAacgtaaatttttt
ttaatttctgacTCGAGGAAAAGAATTTTCTCATTGAAAAGACGTG
Run BLAST on NCBI

transcript from alignment at scaffold_501:3515..16668+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069499 ID=TCONS_00069499|Name=TCONS_00069499|organism=Clytia hemisphaerica|type=transcript|length=13154bp|location=Sequence derived from alignment at scaffold_501:3515..16668+ (Clytia hemisphaerica)
TTTCGCACGTCTGCCCGCAGTTGGAAAAAGGGGCGCACTTGCTCGCTGCG
CTCGGTCGTGTGTAACAAGCGTGGTGTTTTGACAACAATTCAAAGACTCG
GTATATCTAGTAAGCGTTTTCTTTTCTTAGTTTCCTCTTCACCTGGGGGG
GGGTAAAATATGTTccaaattcaataattttcaagatgGTTATCTGACAT
TGCAGTAGCAGGGTAGACTTTtaattattttggaaaatttgccaatttca
ccgaacctccaaagtcatttgatttgatttaatgaacgacgtattaaaaa
atacacgatttctcttctgcaccgagtaggcttttaaatcgaaatatgaa
aaaaatccatagtggaacacacgcaagtgtctgtgcactctaagaggata
aacttggtggagttatcataacaaatttgttgtcaaaagaGATTTAAGAG
TAAGTGAAAacacaggccagatatcaaccagtcccatgtttcaaccaatc
gtcccaagttagagctgcCCAAGTTGACGGTATTTTGTTCCAGACGATCG
TAATCGATACACAGCCGTTTGCGTCACGCGTGTTCCAAAaggcaaaacaa
tggaaatgtgTCAATCCGTTCAGCtggcaaaaatggcaaaaatacaaaat
gttCGTCGCAAATaccttttcacaaaaaataaacCCAGAGATATATGTCT
GGAATCAAAAATCTattgttaaatatttcccgttttccaaaaaggaaata
tttgttaaaacgggctttcttcTCCATTTTCAgatgtcaaaacgccttcc
atacgccctgactgacgcccgttttagcgcctaaagaaagtttactttat
aagaatcaaatcaaaaactcttgattgaaggcaatatatctttcggtaat
tagttattagaaagtaaacaaaagatggcgaaaaagaaaagcatatttat
ttttattataagcatctacattataagaatcaaattaattactcttgatt
gaaggcaacatgcctttcggtaattagttcttgcaAAGTAAACAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatta
taagtgtctactttataagaatcaaatcaatttcagaatttttggcgttT
CCACTGCGATaacatgtgagcgataacttctctatttgagatgtgagcga
ccgtctatcgcatgtcatctcaaaagtaaagttgaaacaagctttcttcc
tccgactcaaattttatcgataaaacgaatttaaaatctacacatgggtt
attttgcttacttagggatatttcgataggaagctctgcgggacattctt
agcgacagctacttgctagtatatgtcaataatgaccttcacttttaagg
aaatatttagtcgcaattttgtgattttcgttttcatttttcattgctta
tTTCTTTTCGCCCTATcgcaaataaaacaataggttTTTAATCCCAGACG
TTTgtcttgatttattttttgcgacAAACAAATTTGCGATGaacttattt
tttcaaatggacACCCAGCTTAAGGGCTTTTTTATAGCCAAACAGAATTA
CCATAGGCATAGCTTTACCAAAATAATTATATGAAAGGTacaatttcagc
cattttcagccaaatccaacaatTTTTCTTGCTTGTGCTTTATGGAAACT
TATATTCTGTCCATGTGTAAACATTCCCGTATGTTCTGATGTACTTGACT
ACCGGTTTTCAAACCCGGATAAGGGGTACTGCAATAAAAGTTCCACCTCC
CAAGGTGACTTTCTTTGCCAataatttttgatagaattgtTCTCCTAATT
TCCCCCTTTCAGTAGGTCTTCCTCTATCTTATATGCTTcagaaaaccaaa
aacattgtcCTAAAAGCTTAGCCTCACAAAGCCCGCAGCTTATAATATAA
CCCCCTGGTTGAAGCTTTGTATTCTTATCCTATAAATATAACAGAACAGT
CATTCTACAGAAATGGCTGTCACgccagtttgcagagtgtgACGTGTTTG
CTTGTTATCTGAAAAAGTTGAGAgcaggtgcaaaatttgaggttttcagg
tgTTTAAGTGCAGACTGATGTTTTTTAACCCTGACTGTAAAGTTTTGCTA
TTTTCTCCTCAAGTGcagctaattttagcaattttttgcctttttgggcc
aatttctGAGGTATAGGTGCACCTTGTCCAGACCAAAATTTATCACGTGC
GCTCTTCCAGTGCGGAACTTGGTATTTCCGAATTTTTCCTTGAGAGCAGC
CTTGtcatactctgcaaactggctgTCACGTGACTTTTTTTCTACCGCAT
GATACAAATCACGCATTTTCCTTTGATGTTGGAAATTTTCACATGACAAG
AAGTTCGGACTTCACATTAAAAAACAATGTATATAGATTATGGAAAGGAT
TCAgtttatttaaaggttttaattattggacctacctccgggtgccccgg
tggccggaaaaaccgggtttttaggtattttcttgaaatttcatcataag
tttttgtgattttttgcacaaagatgcgtattaacaatgcccaaaacatg
gccgagtctgatttttgagaaaaaaaaattttctggcttgatatgccgga
aatcgccgtttttctggattttcattggactttttccttataatcagttg
ttttttcattcaaaaacattattaatagcaatgcccatcatcatgcatgt
tttaattttcaataaaattgatttttgaaaccggaactatttaaaaattg
ccggaacaacctattttcgccggaaatacagtatttcttgaacttctcga
gctgtactttatatttttttatgaaattttgcacactgatgcaaaatgtg
tCATCACAAGCGATTCGAAGTACAAATGAATTGGAACGTTCTCACGTTCC
ATAGCGTTCCTTGGAACGTTCTAAATCGTTCCAGAACGTTCAGAAACGTT
TCAGAACGTTCAGGAACGATCTAGAACGTTTTAGGAACGCTATGGAACGT
TCCAAAAGCGTCCAAAAGCTAATAGATTACTCAATAAGAACGTTAGGGAA
CGATTTTGAACGTACAGGACGTTCGTGAACGTTCTTCTGCAATGTTTCTG
AACGTTTCAAGACACTCCTAAACTAGTAGTAAATAACAGGGAACGATCAG
GAACGTTGAAGAACGTTCTCTGGCGTTCTAACAACGTTTCTAAACGTTCG
AGAACGTTCCCTATCGTTCGTTTTGCTAGAacgttccattttatttgtat
ttaAAGTCGATTGTGATGACacaaatgacaatacctaaaatgtgacggag
cccgattttcgaaaaacattttttccagccgaaaatgccggaaatatgcg
ggaaaaaccgtttttttagcattttctcaagatttcctcattaaattttc
tgatttttttcacatatatgcgtaatagcaatgcccaaaacttggccgag
ttcgatttttgagaaaaattcttttctggccgaaaatgccagaaatatac
cggaaatcgccgtttttgcagattttcattggactttttcctattatttc
tttgttttttttcacgaaaaatcaatattgataacaatgctaaCCATCAA
GTATGGttcgattgtcaataaaactgatttttgatgcgGGGACTTtctaa
aagtcgccggaacagccgaatatTGCCGGAAAAacgatttttcttgaatt
tctcgagctgtactttatatttctacatcaaattttgcacactgatgcaa
aatggcaatacctagaaaatgtgacggagcctgatttttgaagaaaaaaa
tttcagccaaaaatgccgataatatgccgtcaaaaccggtttgttgccat
tttctcgagatttcattaatcgtttttcccgatttttgcacCAAGATGTG
TATCAGCAATCCCTAAGTGTGGCCGTTTCAgatttttgagaatcatgtTT
TCCGACCGAAAATGTCGgaagtatgccggaaatcgccgtttttgcagatt
tgaattgggctttttccatatatttctttgttttttcacttaaaaaatta
ttgatNCTAAGTGTGGCCGTTTCAgatttttgagaatcatgtttttccga
ccgaaaatgtcggaagtatgccggaaatcgccgtttttgcagatttgaat
tgggctttttccatatatttctttgttttttcacttaaaaattattgata
acaatgccaccatcaagcatgattcaattgtcaataaaacttttgcaatt
ttccaaccggaacttttatttcttttttacctaaacccctcccccccatc
aaaaatcaatgatgaaatttaatgcatttttgctaaccgctatattttct
taatgattgtttttctccttattgctatctaagtttcatcatcaggtagg
tccattcagcatattgcttgtttctttttaatttgccATATGTACTAAAA
GATTCTACAATGtaaagtttttctatttttcatggaGAAAAGGCATTCAT
CTAATTACTAATTAATTTCACTACTTGCttagtttacattttaaaaataa
tggagataatttctaaactttttggaaagttgcaggaattaattatctct
gtaatcataatcaacagaatagcagtatttaaaaaaagactGACCGTCTG
CGAAATTCAAGGGCTGCGTGGACCatctaaacaaaaggaacacAAGACAT
AAATAACAGGCCGTtcgttttggttaaaattgttctataaaATAGCGAAT
CGAACGAATACTATGTATGTGATCTTAGCAGATCTTATTtgataaaagga
ggaaaagaaaaatggagTAACATTTGACATGGAATGAACGtctcaaaaat
caatatttttggtGAGATTTCTTAGCGTCACAGATTCTAATGCCCTCGAC
GTTATTTATGGAAAGAATCNgttctggtgaaatttcttagcgtcacaGAT
TCTAATGCCCATCGATTTGTAAGTGGCCccttagtagaggcttctttaAA
GTTTGGGGAATGTGAGTCTATAAGAGTTAATTATTTTTCGGTGGAAAAGT
GTttgaaaaagcattttttcgTGCTCAAGGTTTGTCTTCCTTTGCAaaat
tttgtcttcaatcttaaatagatgaacaagTATTTCACTAatagttatga
ttttttcacagaacatagtaaaactatttgGGAGTTTGaactttttacag
aattttaaAAAGTCTGTTAGTTGTGgagaaaagtttagacattACATTTC
TAAACCAAACAGCTATGGATAAAATCTATCATCGTAATACTTTAGGCATA
CAAACTTTCataagcagaaactttcgcaaggtcaaaaaatcgtgaaattt
atgacatttACTTTTGCAAGGTCTCATATACGTGATCTTTACTATATATT
CAGCATGTGACCAGAGCCAACTAAGCAGTCTTTCTAATTTTGGTCGGTAA
AGGAGTGCCagctatgaaatatttttttgaaatttcgacgtaaaaagtca
gttttttttaataattttataactcctttttcaaaactaatgctgccgtt
acaaagcaaaaagaGTTAAGTAACAGAtttgagatttccaaaaaatttat
tgaataaaacGCTCATGTGTTGATATCTTTCGTTTGATATATggtaaaaa
tttcacttttttagtCCCTAGACTATGGTTTACGGACGATTTTTTGTTAC
TTACCtctttttgaaatgaaaaaaggtaACATACAGTACCTCTTTTTTCT
AGtcaaattgtttcattttttgttaCATACATCTTTTTCAAAAGTATAAG
AAGCAAAAAGTTACAATCGATAGTGTTGCATACCTCCTTTTAGAgtgtaa
aaaatagaaaatctttcattttgtaACATACAgcttttcaatttaaaaaa
atctagcCACCATGTAATATACCTCTTTTGGCAAGGCTAAAATCGGCCCG
TTCCGGTTAGAATTTATTTCTAATATATGTCGGACTGGAAAGagcatata
ttttttttaatttgtaacTTACCTCTTTTTGTTTTCTAACAGCAGAATGT
ATGATTGcttaaaattcaagttagagcatcctctatacgattattaaaaa
agaattgacaaaaaattcaaatcctgaagctcacaatatctctgTCATAC
TGATGACCCCATTTGTGTATAACAttgtaaaatttctttttaaggtTCAA
GTGTTTGTCAATGTGAAACAGCTCCTCCTCAAAATGAGGCAGAGTCGACC
CCTAAAGAAGAGAATGAAACACCTCAACAAAAAGTAAGAAGCATAAGTCA
TGATTGAAATCAAGTTATTTGtggtaaagaaaaatattttttacaaatgt
CTGTCGTTAACATCACCTTAGCTTTCCTCAATGATAAAGGTGATAATATC
TCTATTTCCTTAGGGAACTATTGGTTTCATTGGGTTGGGTAACATGGGCC
ACCACATGGGAATGAATTTGATAAAGGATGGGTATAACCTTGTTGTCTAT
GATGTATATCCTGAAGCAATGAAGCCTTTCAAAGAGCTTGGCTCCACAGC
TGTCACTTCACCACGAATGGTAGCAGAACAAGTCACCAAAATAATAACTA
TGTTACCTTCAAGGTAAGAGGGAATTATTGATTATATTTTTACCAATCAA
TTTAAGCTTTGATGAAATAAGTAGTGAAGGTTCTGAATGATATGGAAAGA
CTCGGTGTTTGGTTAGAGTTTTaaagaaacaaacaaacattctttattat
ttttttagccCTGATGTCTTTGAAGCATATAATGGAGATCAAGGAATTTT
GAGGTTTGTTACGTTTAACTTCTATCCAATTAAAGAGAATTGTCTAGACA
AAATATTGAATTGCTATAAACAAAACAGTCTGATCTGAGTACCTTTTCTG
TTTTCGGACATTGATGgtacagtgccgtagcaactgggggctatgccccc
cccccccaataattttttcaaaaatggttattttgcaaaatgcaaagttt
ttcttttttattttgaaagcattttgttttgagtgcattttcaagcaatc
tagagcttaaattttcaaaattcccccctcgggccaaaccatggttggcc
ctcgcggtgtcactaaacttcagccccccccccaataagaaaatgcttcc
taTGTGGTATTTGAAAAGTTTAATCTAAACCATTAATGTTGATTTGCTCT
TGAAAATTCAGTAATTTAACCATCATTTATAGAGGTATGCAGCCAGATAC
ATTAATGATCGACAGTAGTACTATAGACCCATCGGCTTCCAAAGAAGTTG
CGACAATAGCTGCCGATGCTGGCGGAACTTACATTGATGCACCTGTATCA
GGAGGTAAGTAGCAGCTGCTTGAAACATCGTGGAAGACTTTCATTTTGAT
ATGTAGATTTTAAGACTATCCTCTTAGACAGACCCAAAAGCCTTATTTGT
TTTTTCTCTATCATTAGCTGTTTTGCAAGAATCATTTTAAAAGATGGCTT
ATCTACGATTTGATTCAATCCCCCCCCAGTGCACTGTACCACATGTATCA
AATACACTATTAGAATCGAATCCATTTATCTAACATGAAAATGTACGAGC
TATTGACACAAATTACCATCTAGATTTTTACAATCTCTTTATGGTTTGGC
CCGCTGCAACTGAAAATCTTGTTGTCGTTTTTAACTTCTCTAGGAGTTGT
TGCAGCACGTGACGGTGCGTTGACTTTCATGGTGGGTGCAAAACGAGAAG
ATTTTGAACAAGCGGAAATCCTACTCACCAGCATGGCCAAAAATGTTGTT
CACTGTGGTGCTACAGGTACTGGACAGGTATGCACAATAATTATACTAAT
ACCTTAAACCTTTAATATTTCTGTTTTAAGTcacattttggaattttcat
CTCTTTTGGTTCTGTCACTTCTTGGGTAGCAAGACCTCTATATTAGGTCT
CAGGGGATGGCGTCCCTGCCCATTGCCAGCCAAAAACAACAGAAAGTACA
gatcaacaacaaaacaaaacacttTGGTAGCATGGAATACACTTTGTTTA
GTTCCACAGAGAGTGGCGCCTCTGCCATTTGTGAGCCACAACAACAGCAG
CAACAtttcaacagcaacaacaaattTTGGTAGCAAGAATTTAATCGATT
CTCAGAGGTTGGCGACTCCGCCAGTAGCAagccaccccccccccccccaa
aacgTTTGGTAGCACGAAATAAATTGTTTCTCAGAGCTTGGCGACTCTGC
CAAAAGTGAGCCGAATGTGACGACAAAAAGACTGATCGACAACTCCACTT
TTTACCACACGGGAATTTCTAAAGGTGGACATCATCACACATCATCATCA
TGAACATTTGGGATCAATGCAGTATTTATTGCGATCCTGGTTCAACAACT
TTGACGAAAACGACGAAGACATTTGACTGAAGAAGAAgacaagaagaaag
aagaagaaaaaaaattcgcaaTATAAACTGTCGAAGAATTCAATGCGAGT
TCGAGTTTTATTGCTGGCTTGTGACAATGACTTTGCAGGAACCTCCCCCT
CTCCCCTCCTGCCTAGTGTCACCAAGCTGTATATTACAATATATTATTTG
TAATATTTTAACCCCTGACAATTATGACTGAAACGACTGAATTTATAAGA
ATTatttatacattaaatttgacaGACTTATGTTACTTTCTCCGCTGAGG
TCTTTACAGGAGTCCCCCAACGTTTTGGGTcaagctggagcttttacaag
GTTTTCGATGATTCGGTTGATGGTTGAATcttgagacaaaggattttatt
gctttttctaaagaacgcgtcatctctattatttcaaatgaccaattagt
gaagtatcttataaaaactccagctcatcccaacgtttttcgtgatggcg
tgaatggCGTTATTTCAAgttcgtgatttcgtgatttaagattttaaagt
acGTGATTGCGTGATTGTAGGAACTAACGTGTTCAACGCTCTTACAGGTT
GAGAGAAGCATTTTCTAAGACAAACAAGATTTGCTAGTTTAATTAAGGCA
GATATTTCTAAATCCTTGGCGAcacgaaaagtttttttccgtTGGTGCAa
ttcaacatgctccatccccaccaacctgaaacgctttcatGCGtctctcc
accccatttttatTTCTACCAATGAAAGTGGAATCGACAtcacttttaat
aacatttgtgcgtgtctgggacaaaatcagcgtgtctattgggtatttcc
ctcaatttttgtcccatgaaacaaaagcAACCATGGGACAACGCAatctt
ttttcttgtgttggtgggatggagcatgttgcattgcaccaacgcgaaaa
aaacttctcgtgtccccaagccttaagctCTCTTATACGAAACTAAATTA
TTCGACCCACTTATTTTCTTTATACAGGCAGCAAAGATTTGCAACAACAT
GTTGCTTGCTGTTTCGATGATTGGGACTGCTGAGGTGATGAACATGGGTA
CACGACTTGGTCTAGACAAGAAGATGTTGGCGCACATTCTGAACATCAGT
ACAGGTCGATGTTGGTCCAGCGAACTATATAATCCATGTCCTGGTGTTAT
AGAAGGTGTCCCATCCTCCAACGATTATCAAGGTGGCTTCGGTACTCAGC
TCATGACTAAGGTATCTCCATGTTACAAATATGCACATCTGCGTAAAGAA
ATATCTGAAAGTATCAAAAAGTGGCTTCAGTTTCATCCTTATAAAGCTCA
GGGACTCCGAAACTACGTAAAACCTCTAGATTCTGTATGCGCTGCTTTGG
TCAATTGATTGCAATTTTCtgattgtttttctctttattcCAGGATCTCG
GATTAGCTCAAAACGCATCGACAGCTACCAAATCAGCAACGCCCATGGGT
TCTCTTGCTCATCAAATCTATCGTGTGATGTGTAATAGTGGCTATGCTAA
AATGGACTTCTCTTCTGTATACAAGTTCTTAAGAGAAGACTCGTAATTCC
CAAAGGTCTTTTTAGACATTGCTAAAGCATCTAAACATAAGCATATCTAT
GAAGCTAGATATAGATATAGAACTACAATGAACACTCAGACTTTGTTAAG
CAAAGACAGCTCAGAGCCTGGTACTTCGGCAGACTGCACTTCAACGCAGT
GGTCgaatttttatcaatattttctttcttttgcctTTTTGTAATAATAA
TGAATTTAACTTTTATTCGGTTTGGTAAATATACAATTTGTAACAAAAAT
TATTCACTAATAATAGTACCCATCCTAGCTGTCAGACTTTCTCTCGATAA
GGCATCCTAAAACCAATTTGATACATTCTTattaattgtaaattttttct
cagattTAGATTTTGATATCGCTCGTTCTACTGATTTGGGTAGCAGGTGG
CTTCGTGCTACCTAGGGCGTGGCGACCCTACCCTTTTGCGAGCCAATACA
AACTTTGACGATGACGAAAGGTAGCATGGAATGAACTTTTAGTTCCACAG
AGAGTGGTGCCTCTGCCATTTGTGagccacaacaacaacaacaacgacaa
caaACTTTGGTAGCATGGAGCATTAATTCCACAGAGTTTTGCAACTCTGC
CAGTAGCCAGCCTCGACagaaaacggtttttttggtaGTACGAATTGTTA
CTTAGCAATCAAACCGATTTACGCCATTTCATGACGACTGTGGTGAATGA
TGAATTAAAACGAATACTGAATGAATGAATACTTTTATGACGATACTTCA
CGATGATGAGTAtgataatgaaaaatgaagatgatgatgatatttcgaca
tttcaaacaaattctTATTCAAGGATTTTGAAATCGATTTCACAAGTACA
CGAGAGACTATGTATAACGACGTCTTTTCAAAGGAACCCAAGCGATCTTT
GCTTCTTCGTGAGTTTGATGACTGGTGAACGATATTTACTATGTAacgta
aattttttttaatttctgacTCGAGGAAAAGAATTTTCTCATTGAAAAGA
CGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043320XLOC_043320Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069499-exon-scaffold_501-1491911889:3515..3623TCONS_00069499-exon-scaffold_501-1491911889:3515..3623Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:3515..3623TCONS_00069499-exon-scaffold_501-1510915933:3515..3623Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:3515..3623TCONS_00069499-exon-scaffold_501-1575043694:3515..3623Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:11859..11947TCONS_00069499-exon-scaffold_501-1491911889:11859..11947Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:11859..11947TCONS_00069499-exon-scaffold_501-1510915933:11859..11947Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:11859..11947TCONS_00069499-exon-scaffold_501-1575043694:11859..11947Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:12078..12277TCONS_00069499-exon-scaffold_501-1491911889:12078..12277Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:12078..12277TCONS_00069499-exon-scaffold_501-1510915933:12078..12277Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:12078..12277TCONS_00069499-exon-scaffold_501-1575043694:12078..12277Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:12423..12467TCONS_00069499-exon-scaffold_501-1491911889:12423..12467Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:12423..12467TCONS_00069499-exon-scaffold_501-1510915933:12423..12467Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:12423..12467TCONS_00069499-exon-scaffold_501-1575043694:12423..12467Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:12897..13018TCONS_00069499-exon-scaffold_501-1491911889:12897..13018Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:12897..13018TCONS_00069499-exon-scaffold_501-1510915933:12897..13018Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:12897..13018TCONS_00069499-exon-scaffold_501-1575043694:12897..13018Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:13358..13491TCONS_00069499-exon-scaffold_501-1491911889:13358..13491Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:13358..13491TCONS_00069499-exon-scaffold_501-1510915933:13358..13491Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:13358..13491TCONS_00069499-exon-scaffold_501-1575043694:13358..13491Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:15092..15325TCONS_00069499-exon-scaffold_501-1491911889:15092..15325Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:15092..15325TCONS_00069499-exon-scaffold_501-1510915933:15092..15325Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:15092..15325TCONS_00069499-exon-scaffold_501-1575043694:15092..15325Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:15508..15669TCONS_00069499-exon-scaffold_501-1491911889:15508..15669Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:15508..15669TCONS_00069499-exon-scaffold_501-1510915933:15508..15669Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:15508..15669TCONS_00069499-exon-scaffold_501-1575043694:15508..15669Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1491911889:16018..16668TCONS_00069499-exon-scaffold_501-1491911889:16018..16668Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1510915933:16018..16668TCONS_00069499-exon-scaffold_501-1510915933:16018..16668Clytia hemisphaericaexon
TCONS_00069499-exon-scaffold_501-1575043694:16018..16668TCONS_00069499-exon-scaffold_501-1575043694:16018..16668Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_501supercontigscaffold_501:3515..16668 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
165.53	164.7	186.555	189.347	48.3905	41.8047	55.2904	48.9022	52.6755	41.8743	40.4371	56.7425	52.681	69.1907	45.721	45.2798	73.0554	66.0732	36.0059	25.0185	38.6702	36.996	85.6831	81.496	81.5268	75.3023	42.0335	34.7598	44.9362	47.2825
Blast
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BLAST of TCONS_00069499 vs. Swiss-Prot (Human)
Match: 3HIDH (3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 1.476e-121
Identity = 173/277 (62.45%), Postives = 218/277 (78.70%), Query Frame = 1 
Query:  259 KDGYNLVVYDVYPEAMKPFKELGSTAVTSPRMVAEQVTKIITMLPSSPDVFEAYNGDQGILRGMQPDTLMIDSSTIDPSASKEVATIAADAGGTYIDAPVSGGVVAARDGALTFMVGAKREDFEQAEILLTSMAKNVVHCGATGTGQAAKICNNMLLAVSMIGTAEVMNMGTRLGLDKKMLAHILNISTGRCWSSELYNPCPGVIEGVPSSNDYQGGFGTQLMTKDLGLAQNASTATKSATPMGSLAHQIYRVMCNSGYAKMDFSSVYKFLREDS*F 1089
            K GY L++YDV+P+A K F++ G   V+SP  VAE+  +IITMLP+S +  EAY+G  GIL+ ++  +L+IDSSTIDP+ SKE+A      G  ++DAPVSGGV AAR G LTFMVG   ++F  A+ LL  M  NVV+CGA GTGQAAKICNNMLLA+SMIGTAE MN+G RLGLD K+LA ILN+S+GRCWSS+ YNP PGV++GVPS+N+YQGGFGT LM KDLGLAQ+++T+TKS   +GSLAHQIYR+MC  GY+K DFSSV++FLRE+  F
Sbjct:   60 KHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREEETF 336
The following BLAST results are available for this feature:
BLAST of TCONS_00069499 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
3HIDH1.476e-12162.453-hydroxyisobutyrate dehydrogenase, mitochondrial ... [more]
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