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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069475 ID=TCONS_00069475|Name=TCONS_00069475|organism=Clytia hemisphaerica|type=transcript|length=1191bp
CACAAATGAACAAAGTAACTCATGCATGTAACATATCTTTAACCAGGACC
CTAGTTAACTGGCATAACACAATctaatcaaaaaatacaaaatcattAAC
NNGAAAATGATACTTAGATGACAAAGTATAGACAATAAGTCCCTTACGCT
ACATTAAAATAGTTAcacaaacaaataattttggtaTTAACAGTCAGAGC
ATTTCCCAATATTAAGAAGTACCTCCAGAATTACctctcaaaattaattt
cattatgatGACTGACTGATTAATTTATATAGTTTGCTTCTGTTTGCTTT
CTatataatttgttaaaattacCTAGCCAAAGAATTCATCTATATAAATT
TGTTCAAGATTATCTACAAGCAatagtttttttcatttgcaaGAAACTAG
TCTTGCCAAATTAAAAATCTGGCACAATGTTTTAAAAGTAATATCCAAGC
TTTCAATACTCTTTCCATTTTTAGCCAATTGAATGTACgttatttttgta
aatctcAGATTCTGTCCATGAGATGGCGGATGGCGTTTATTTAGTCAATG
ACCCAGGCATAATCAATTGTATATTCTAGTCCACTTTCTACAAATGACAT
ACATCACAATTTTACGGTGGTTGGGGTaccaaatattttcatatatataC
TGATGCAATAACCCTCACAATTTCATTTTGTAGCCTGCTGTGAGCTCTGT
CTCTAGTGACAGTGTGAACAATACATTATCCAAATTTTAAGATATATTCC
AAATATTGTTAGTGTTAGTAGCAATCTTTACATCATCGCTGTTGATAATT
CTAATCTACCAAGTCTACCAGCCAAGCCACTATATCAAGAATCCATCCAG
TGACAAATTGATTCGGTGTTAtaataaaatagccagaaaattaaagttat
gatTCAAAAACCATCATtgcgacaaaatatttttcagcattggGTGTTAG
ATgtatatatttcaattctaatCACAATACATAGTCTGTTGAAGATATCC
TTGATTTAAAGTCGCCCATCTGTTTTTGAAATGCCTTTTCAAGGAGCAGG
ATATATACAGAATTTATGGttgattattttgatgttttttttatattata
tatattttacacctaaataaattgaaaaaagttataTCGAAATCAAATGA
GCGATATTAAACCGAATACTTTTCATCTGAACAAACATAAA Run BLAST on NCBI transcript from alignment at scaffold_50:254322..255512 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069475 ID=TCONS_00069475|Name=TCONS_00069475|organism=Clytia hemisphaerica|type=transcript|length=1191bp|location=Sequence derived from alignment at scaffold_50:254322..255512 (Clytia hemisphaerica)
TTTATGTTTGTTCAGATGAAAAGTATTCGGTTTAATATCGCTCATTTGAT
TTCGAtataacttttttcaatttatttaggtgtaaaatatatataatata
aaaaaaacatcaaaataatcaaCCATAAATTCTGTATATATCCTGCTCCT
TGAAAAGGCATTTCAAAAACAGATGGGCGACTTTAAATCAAGGATATCTT
CAACAGACTATGTATTGTGattagaattgaaatatatacATCTAACACcc
aatgctgaaaaatattttgtcgcaATGATGGTTTTTGAatcataacttta
attttctggctattttattaTAACACCGAATCAATTTGTCACTGGATGGA
TTCTTGATATAGTGGCTTGGCTGGTAGACTTGGTAGATTAGAATTATCAA
CAGCGATGATGTAAAGATTGCTACTAACACTAACAATATTTGGAATATAT
CTTAAAATTTGGATAATGTATTGTTCACACTGTCACTAGAGACAGAGCTC
ACAGCAGGCTACAAAATGAAATTGTGAGGGTTATTGCATCAGtatatata
tgaaaatatttggtACCCCAACCACCGTAAAATTGTGATGTATGTCATTT
GTAGAAAGTGGACTAGAATATACAATTGATTATGCCTGGGTCATTGACTA
AATAAACGCCATCCGCCATCTCATGGACAGAATCTgagatttacaaaaat
aacGTACATTCAATTGGCTAAAAATGGAAAGAGTATTGAAAGCTTGGATA
TTACTTTTAAAACATTGTGCCAGATTTTTAATTTGGCAAGACTAGTTTCt
tgcaaatgaaaaaaactatTGCTTGTAGATAATCTTGAACAAATTTATAT
AGATGAATTCTTTGGCTAGgtaattttaacaaattatatAGAAAGCAAAC
AGAAGCAAACTATATAAATTAATCAGTCAGTCatcataatgaaattaatt
ttgagagGTAATTCTGGAGGTACTTCTTAATATTGGGAAATGCTCTGACT
GTTAAtaccaaaattatttgtttgtgTAACTATTTTAATGTAGCGTAAGG
GACTTATTGTCTATACTTTGTCATCTAAGTATCATTTTCNNGTTaatgat
tttgtattttttgattagATTGTGTTATGCCAGTTAACTAGGGTCCTGGT
TAAAGATATGTTACATGCATGAGTTACTTTGTTCATTTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069475-exon-scaffold_50-1491911889:254322..255512 | TCONS_00069475-exon-scaffold_50-1491911889:254322..255512 | Clytia hemisphaerica | exon |
| TCONS_00069475-exon-scaffold_50-1510915933:254322..255512 | TCONS_00069475-exon-scaffold_50-1510915933:254322..255512 | Clytia hemisphaerica | exon |
| TCONS_00069475-exon-scaffold_50-1575043694:254322..255512 | TCONS_00069475-exon-scaffold_50-1575043694:254322..255512 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_50 | supercontig | scaffold_50:254322..255512 . |
Blast
The following BLAST results are available for this feature:
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