TCONS_00069426 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069426
Unique NameTCONS_00069426
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069426 ID=TCONS_00069426|Name=TCONS_00069426|organism=Clytia hemisphaerica|type=transcript|length=1451bp
TTAAAGGTTTGAGTTTTTGATAACATTCTAATgaagttttttcctttttt
ctttaataCTTCACAAATTCATGGACACTGTTTTGCATAGTCAATTTCTT
TAAGtaattgttttaacttttagcacaaaaataaaaaaaataaaaaaaag
cactACACAGCACTTGTGCACCAACAATCACCTTCATACACCTCCCACGA
TGCTCGAACAAACCACTGGTCGCACTAAACTATTGACACGTTCGAAAACA
GCTGGCAGTATCAAAGTTCATTCTTCAGATTTCACCAATGAACTTGTCCA
AACTGACCCTATTCACAAGtATATTTCCAAAGATGATTCCAACATTACAC
CGTTTCAACCAAATTACTCTTGTAGTAATGTGAACCTTCGGCGAAGTAAT
TCTTCAAATTATATTGGTTGTTGGCTCAGTGAAAAGTCAATCAGAAACCT
CCAGAAAAAGACAGATTTCGAATCGAAAGAGATGGCCAACATGTATCACA
GTTTACTCGATAGCGAAGAAAGACTTCAAAAGGATTTAGATGATATTATA
ACATATGATCGAATACGGAAAGATCGCAAATTACAATGGCTCTTACAAAA
GTGGTACGAGAAGACCTACATTCCACTTGATAATAAGATATGCCAGGAAA
TGAACGGTTTTCAATGGCAGAAATTCgatcaagaaaaaagaaaacaattt
atcaaatatCTTAAACATCGAAATGAAAAGGGACATATTTTCCTGGACAT
ATATGAAGAAGCAGAATACGATCCAATGTCACTCAATAAGAAACGACCTG
GACCAATAAAGGCGGTGACGGAGAAATTGGAAGATCCATTACTTCATCAA
CAATACAAACGAAACGAAGAAGATCGTGTGGTTCATGCGTGCGATAATGG
TATCATGCTCACGGAGAAACAGATCGAGGAGAAGAGATTACCTAAGAAAC
CGCTCGTCCCGCTTGGTAGACACGATACGGAGTGCAGTACATGGCTAGAT
ATGAAACTCTATGATATTCAAAGTGAAGTTCGACTTCGAAGCCAGGACCG
AATTTACGGCGtacgaaatatttcaaataccTGTTTACACGACATCAGTA
TGGAAGAAAAAACTGCGGAATTCTCACAACAAAATCCGAATACTGGTAAA
TCCATCTGGAAAAAACGACGACAGTTTACTAGGAGACAAGACACTTTAAA
ATTGGTCTAAAAACTCTTTCTAATATTTTGGTTACGTTTTCAGCCCTTTT
AAAGCTGTGCCTGCACAATTTTCTACGATATGTAAGGTAGTTGAAATTGT
TATCCCTCTATCATCAAGTTTTACTCAATGCAGGACTTCGTTCCTAGATT
ATATAAAATTCATTTTGTAAGGATTTTTAACATATTACTAATCATATTTA
TTGGTAGTAAGACTTATAATCGATTAAGTGCAAGGTTTTATCCCAAATTG
G
Run BLAST on NCBI

protein sequence of TCONS_00069426-protein

>TCONS_00069426-protein ID=TCONS_00069426-protein|Name=TCONS_00069426-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MLEQTTGRTKLLTRSKTAGSIKVHSSDFTNELVQTDPIHKYISKDDSNIT
PFQPNYSCSNVNLRRSNSSNYIGCWLSEKSIRNLQKKTDFESKEMANMYH
SLLDSEERLQKDLDDIITYDRIRKDRKLQWLLQKWYEKTYIPLDNKICQE
MNGFQWQKFDQEKRKQFIKYLKHRNEKGHIFLDIYEEAEYDPMSLNKKRP
GPIKAVTEKLEDPLLHQQYKRNEEDRVVHACDNGIMLTEKQIEEKRLPKK
PLVPLGRHDTECSTWLDMKLYDIQSEVRLRSQDRIYGVRNISNTCLHDIS
MEEKTAEFSQQNPNTGKSIWKKRRQFTRRQDTLKLV
Run BLAST on NCBI

transcript from alignment at scaffold_5:35455..40452-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069426 ID=TCONS_00069426|Name=TCONS_00069426|organism=Clytia hemisphaerica|type=transcript|length=4998bp|location=Sequence derived from alignment at scaffold_5:35455..40452- (Clytia hemisphaerica)
TTAAAGGTTTGAGTTTTTGATAACATTCTAATGAAGTTTTTTCCTTTTTT
CTTTAATACTTCACAAATTCATGGACACTGTTTTGCATAGTCAATTTCTT
TAAGTAATTGTTTTAACTTTTAGCACAAAAATAAAAAAAATAAAAAAAAG
CACTACACAGCACTTGTGCACCAACAATCACCTTCATACACCTCCCACGA
TGCTCGAACAAACCACTGGTCGCACTAAACTATTGACACGTTCGAAAACA
GCTGGCAGTATCAAAGTTCATTCTTCAGATTTCACCAATGAACTTGTCCA
AACTGACCCTATTCACAAGGTAAATGAAATGGGCTTTTACATTTCCTTAA
CCATACAGGGGTTGGACGAACTGGATACCCTCCTGGAAAAAATCAAAATT
TGCAAAAAGGAAGTTTTAGAATAACTTTAAGCGGAAAAAGAAAGGCGAAA
GGAAAAACGACAAATCTTTCTTTAGATCCCCTGGAGATCTTTCAGAACTC
CCTGTAAAAGTTCACCCCCTTTTGGATATAAAATGGTATGGCCAATGTAT
TAAGAACGGCCTACGTATCCTTTTTTTATTTATTTACTCTTCTGTCATAT
AAGATCGAGCTTTAAAAAGTTAGAGCAATGGTAATGTTCTCCGAGTGAGT
GTAGTGCAATGATTCACATAGACCGACTCTACAACTTTACATCCCTATTT
CTTACGTAAAGCAACATTTTTTTTATTCATAGTATATTTCCAAAGATGAT
TCCAACATTACACCGTTTCAACCAAATTACTCTTGTAGTAATGTGAACCT
TCGGCGAAGTAATTCTTCAAATTATATTGGTTGTTGGCTCAGTGAAAAGT
CAATCAGAAACCTCCAGGTATTCTTTCTTTGAGTAATCTGTCACAATCAG
CCATTATGGTTTATTAGAGCTAAACGATGATTTAGAGGTAAAGATTCTTA
TGAATTCCAATCTTTTCAAAGTAGTTTTCTAATCCCGTATCACTATTCGA
CTCTTTGTATAAGTTTTTCTTTCTTCTTATCTTTCAGAAAAAGACAGATT
TCGAATCGAAAGAGATGGCCAACATGTATCACAGTTTACTCGATAGCGAA
GAAAGACTTCAAAAGGTTAAGATTATGATTTGTAAAACTTACCACCAGAT
TATCATTCCTGAGCTGATTTTTTCACTGTTAACATTTTGCTGAAACTTGC
TCTTGACTAATCTCAAGTTCGATGTTCGATGAGATGATAAACGACAAAAA
TTTCGTGTTTAGTGATTTTCAAATTTTCTTCTTCTTCGTAGCAGCGACGA
TGAGTTGCCAACAAAACATTAGCTTATTTTTATAAAGTAGTGTTGACTTT
TATTAGCCTTTGTTGCTACCTTTTCGTCAACATGAAATAAACTATTACAT
TACATTCTTCTTTAGGATTTAGATGATATTATAACATATGATCGAATACG
GAAAGATCGCAAATTACAATGGCTCTTACAAAAGTGGTACGAGAAGACCT
ACATTCCACTTGATGTAAGAATAACTTTTTGGCTTGATTTATTGTTTGTT
GTTGTTTTCACGAATATTAGGCGTTTTTACATTCGCTGACATCTACAGTT
ATACTCATAGTAGATGAGTGACCGGCAGTAGTTCAGAGGTCATAATTATG
ATACTTGTGCCTGCTTTTCTTTTGTATTCTATGCTTTTCGGAAACTTTGT
GAAATTCTGTGAGCAAAATTGTGGCCACAAGGGAGCCTCTGAAAAGGGCA
CATCAGTAAACATGTTAATAAAAGGATCCAGAAATCATAATCGTTTTGAT
ATTCCACGCATTCCGTTAGCCATTACTCTTTTCATACATAATGGCGGTCC
TTTAATATGATTATTCCAGAAAGTGAAACGATTTCTAATTTATTTCTAAT
TTTTTTTCTCTATAGAATAAGATATGCCAGGAAATGAACGGTTTTCAATG
GCAGAAATTCGATCAAGAAAAAAGAAAACAATTTATCAAATATCTTAAAC
ATCGAAATGAAAAGGTAACGACGGTAAAATCATGACTTGCTCGTGGAAAC
TCACAGTGAATCAATATTCATTGCGCGAGCTGCAAACAAAACTTTAGAAA
AATATTTGTACGAAACCACTATTACTACACACTCATTGATTCAAGTTGAG
AAATTTAAAGCCAATTGTAAATATGAATTTATAAATCGCACTTCGTGCTT
TTCAATAATTTTTATTCCTTTTCCGTACAGGGACATATTTTCCTGGACAT
ATATGAAGAAGCAGAATACGATCCAATGTCACTCAATAAGAAACGACCTG
GACCAATAAAGGTATTCATTAATTTTTGAACAATTCAACGACTTAGACTC
ACGTTGCGTTTGGTTTGGTTTTGTAAGCGTTTAATTGTTGTCTGATTAGT
AATTTTTAGTGATTTCGGAGAGGCAGAAATACCTGCGAAGGGAAATTCAT
CAAATAAATATTGTTTAGTGGCAGATAAGATTGGAAGTTGGTTAAAGTTG
GTTATTAAAATAATATAGTGATGGTCTTCGAATACCCGAAAAATCAGTTC
AACTGTAAAGTGCTATGCATATGTTAGATTTTTTGAGGAAGTTCTTCTTT
AAACACTATTCCAGGGGAAACTTGTAGTAAATCCATTAGGCTTAGTAAGA
CTTCTACCAAGAAAAGAGTGCAACTTTTGGTTTTTATATCATAAAGCGCA
TTTACGTAAATAAAAGGATCGAGAGAAATAAAACGAAACTGTGTTTTCAA
CACAAGGCGGTGACGGAGAAATTGGAAGATCCATTACTTCATCAACAATA
CAAACGAAACGAAGAAGATCGTGTGGTTCATGCGTGCGATAATGGTATCA
TGCTCACGGAGAAACAGATCGAGGAGAAGAGATTACCTAAGAAACCGCTC
GTCCCGCTTGGTAGACACGATACGGAGTGCAGTACATGGCTAGATATGAA
ACTCTATGATATTCAAAGTGAAGTTCGACTTCGAAGCCAGTAAGTACAAA
GTTCTTATGTCTGATCTGTTTTTTACTCTACAAAATTATCCTCGAATTAA
TCAAAATACGAATTCGTCTTCTATCCCAATTTTTCATTGATGTCCACCCA
ATAGAACAGTAAGTCCTTATTTAGAAAATATATATACTACCAGGTGCGCC
ACAAAAAAGTTTCTCTCTTTGAAACTGATTTTCTCGAAATCTAAAAACTT
TTAAAGGACGATTCCTATTCCATTTGAAAGAATAATAATAAACTTAAATT
TTGATGGGCCATTTATTAAATTCGGTTCATTAGATCAAAAGTTATGCTCA
ATTGAATAAAAAAGTTACTTTCTGAAAGTGCCCGAAAACGTTAAAAATGG
ACCTATCAAATTTTTATTTTAAAATTGGTAGTTGCAATAGGCATTAAACA
CATAAATTTTGAAAATGATGGGTCGAAAGGATTTAAGATATTCATCAAAA
TCATTTTAATTTAACTTTTACCAAGATTTTCCTCAGATTTTGGGTTCCAG
ACTGGATAAAGTCTATGTAAGCCTGGATATACCTCGAAACCCATTATTTG
ATGTATTTTTATGAATTTTACCATAATTTTTGGCTTTTTTCGACGGAGTT
CTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTATTGAAATTCAACCTTTCTTTATACAACAAAAGGTCATTTA
GGCAGCTAATTATCATTTTTAATGACTGAAACGAAAATACTGATGCATCA
TGTAATTTGCTTCTGTCTAATTTGATAGGTCGATTTTTACCGTTATTTGA
GTACTTTCAGAAAGTAACTTTTTTATTTAATTGAGCATAACTTTCAATCT
AATGAATCGAATTTAATAAATGACCCATCAAAATTTGAGTTTATCTTTCT
TCTTTCCAATGGAATAGGAATGGTTCTTTTAAACATTTTAGATTTCGAGA
AAATTAGTTTTGAAGAGAGAAACTTTTTTGTGGCGCACCCGGTATTAAAT
GGACTATTCCAGAAAAAGTCTATACCCCCTATGTTGTGGAGGTGATCAGG
GTGCTCTGGAAAATAAAAAATCCAGGGTGGTCTGTTTTTTGGTCAGTAAA
ATCGGGTTGAAATCCAGGGTGGTCCAAAGAAATGGGAGAAAAAATCCAAG
GGGGTCCTGAAAAATTAGAAAAAATCCAGGGGGTCACCTTTTTAAAAAAA
GATCTCCTCAACATAGGGGGTACAAATTTTTTCTGGAATAGCCCAATGGA
TGGGACTAAATATTCCACATATTAGATTTGCAGTGAGTTCTTTGTAGATT
GTTCAGACCAACCCTGATATGAGATGTCCTATGTGTGCTAGACAAGCGTT
TTGGATTNATGAGTTCTTTGTAGATTGTTCAGACTTATGAAGAACCAACC
CTGATATGAGATGTCCTATGTGTGCTAGACAAGCGTTTTGGATTTTTATT
TTCAAAAGAACTATAACCTTGAATATTTTCTGTTTTTATAAATTTTAATT
TCGTGTTTAATTTCTAATTATGACTCTTGTGTCATTCTTAGGGACCGAAT
TTACGGCGTACGAAATATTTCAAATACCTGTTTACACGACATCAGTATGG
AAGAAAAAACTGCGGAATTCTCACAACAAAATCCGAATACTGGTAAATCC
ATCTGGAAAAAACGACGACAGTTTACTAGGAGACAAGACACTTTAAAATT
GGTCTAAAAACTCTTTCTAATATTTTGGTTACGTTTTCAGCCCTTTTAAA
GCTGTGCCTGCACAATTTTCTACGATATGTAAGGTAGTTGAAATTGTTAT
CCCTCTATCATCAAGTTTTACTCAATGCAGGACTTCGTTCCTAGATTATA
TAAAATTCATTTTGTAAGGATTTTTAACATATTACTAATCATATTTATTG
GTAGTAAGACTTATAATCGATTAAGTGCAAGGTTTTATCCCAAATTGG

Coding sequence (CDS) from alignment at scaffold_5:35455..40452-

>TCONS_00069426 ID=TCONS_00069426|Name=TCONS_00069426|organism=Clytia hemisphaerica|type=CDS|length=8088bp|location=Sequence derived from alignment at scaffold_5:35455..40452- (Clytia hemisphaerica)
GGACCGAATTTACGGCGTACGAAATATTTCAAATACCTGTTTACACGACA
TCAGTATGGAAGAAAAAACTGCGGAATTCTCACAACAAAATCCGAATACT
GGTAAATCCATCTGGAAAAAACGACGACAGTTTACTAGGAGACAAGACAC
TTTAAAATTGGTCTAAGCGGTGACGGAGAAATTGGAAGATCCATTACTTC
ATCAACAATACAAACGAAACGAAGAAGATCGTGTGGTTCATGCGTGCGAT
AATGGTATCATGCTCACGGAGAAACAGATCGAGGAGAAGAGATTACCTAA
GAAACCGCTCGTCCCGCTTGGTAGACACGATACGGAGTGCAGTACATGGC
TAGATATGAAACTCTATGATATTCAAAGTGAAGTTCGACTTCGAAGCCAG
GACATATTTTCCTGGACATATATGAAGAAGCAGAATACGATCCAATGTCA
CTCAATAAGAAACGACCTGGACCAATAAAGAATAAGATATGCCAGGAAAT
GAACGGTTTTCAATGGCAGAAATTCGATCAAGAAAAAAGAAAACAATTTA
TCAAATATCTTAAACATCGAAATGAAAAGGATTTAGATGATATTATAACA
TATGATCGAATACGGAAAGATCGCAAATTACAATGGCTCTTACAAAAGTG
GTACGAGAAGACCTACATTCCACTTGATAAAAAGACAGATTTCGAATCGA
AAGAGATGGCCAACATGTATCACAGTTTACTCGATAGCGAAGAAAGACTT
CAAAAGTATATTTCCAAAGATGATTCCAACATTACACCGTTTCAACCAAA
TTACTCTTGTAGTAATGTGAACCTTCGGCGAAGTAATTCTTCAAATTATA
TTGGTTGTTGGCTCAGTGAAAAGTCAATCAGAAACCTCCAGATGCTCGAA
CAAACCACTGGTCGCACTAAACTATTGACACGTTCGAAAACAGCTGGCAG
TATCAAAGTTCATTCTTCAGATTTCACCAATGAACTTGTCCAAACTGACC
CTATTCACAAGGGACCGAATTTACGGCGTACGAAATATTTCAAATACCTG
TTTACACGACATCAGTATGGAAGAAAAAACTGCGGAATTCTCACAACAAA
ATCCGAATACTGGTAAATCCATCTGGAAAAAACGACGACAGTTTACTAGG
AGACAAGACACTTTAAAATTGGTCTAAGCGGTGACGGAGAAATTGGAAGA
TCCATTACTTCATCAACAATACAAACGAAACGAAGAAGATCGTGTGGTTC
ATGCGTGCGATAATGGTATCATGCTCACGGAGAAACAGATCGAGGAGAAG
AGATTACCTAAGAAACCGCTCGTCCCGCTTGGTAGACACGATACGGAGTG
CAGTACATGGCTAGATATGAAACTCTATGATATTCAAAGTGAAGTTCGAC
TTCGAAGCCAGGACATATTTTCCTGGACATATATGAAGAAGCAGAATACG
ATCCAATGTCACTCAATAAGAAACGACCTGGACCAATAAAGAATAAGATA
TGCCAGGAAATGAACGGTTTTCAATGGCAGAAATTCGATCAAGAAAAAAG
AAAACAATTTATCAAATATCTTAAACATCGAAATGAAAAGGATTTAGATG
ATATTATAACATATGATCGAATACGGAAAGATCGCAAATTACAATGGCTC
TTACAAAAGTGGTACGAGAAGACCTACATTCCACTTGATAAAAAGACAGA
TTTCGAATCGAAAGAGATGGCCAACATGTATCACAGTTTACTCGATAGCG
AAGAAAGACTTCAAAAGTATATTTCCAAAGATGATTCCAACATTACACCG
TTTCAACCAAATTACTCTTGTAGTAATGTGAACCTTCGGCGAAGTAATTC
TTCAAATTATATTGGTTGTTGGCTCAGTGAAAAGTCAATCAGAAACCTCC
AGATGCTCGAACAAACCACTGGTCGCACTAAACTATTGACACGTTCGAAA
ACAGCTGGCAGTATCAAAGTTCATTCTTCAGATTTCACCAATGAACTTGT
CCAAACTGACCCTATTCACAAGGGACCGAATTTACGGCGTACGAAATATT
TCAAATACCTGTTTACACGACATCAGTATGGAAGAAAAAACTGCGGAATT
CTCACAACAAAATCCGAATACTGGTAAATCCATCTGGAAAAAACGACGAC
AGTTTACTAGGAGACAAGACACTTTAAAATTGGTCTAAGCGGTGACGGAG
AAATTGGAAGATCCATTACTTCATCAACAATACAAACGAAACGAAGAAGA
TCGTGTGGTTCATGCGTGCGATAATGGTATCATGCTCACGGAGAAACAGA
TCGAGGAGAAGAGATTACCTAAGAAACCGCTCGTCCCGCTTGGTAGACAC
GATACGGAGTGCAGTACATGGCTAGATATGAAACTCTATGATATTCAAAG
TGAAGTTCGACTTCGAAGCCAGGACATATTTTCCTGGACATATATGAAGA
AGCAGAATACGATCCAATGTCACTCAATAAGAAACGACCTGGACCAATAA
AGAATAAGATATGCCAGGAAATGAACGGTTTTCAATGGCAGAAATTCGAT
CAAGAAAAAAGAAAACAATTTATCAAATATCTTAAACATCGAAATGAAAA
GGATTTAGATGATATTATAACATATGATCGAATACGGAAAGATCGCAAAT
TACAATGGCTCTTACAAAAGTGGTACGAGAAGACCTACATTCCACTTGAT
AAAAAGACAGATTTCGAATCGAAAGAGATGGCCAACATGTATCACAGTTT
ACTCGATAGCGAAGAAAGACTTCAAAAGTATATTTCCAAAGATGATTCCA
ACATTACACCGTTTCAACCAAATTACTCTTGTAGTAATGTGAACCTTCGG
CGAAGTAATTCTTCAAATTATATTGGTTGTTGGCTCAGTGAAAAGTCAAT
CAGAAACCTCCAGATGCTCGAACAAACCACTGGTCGCACTAAACTATTGA
CACGTTCGAAAACAGCTGGCAGTATCAAAGTTCATTCTTCAGATTTCACC
AATGAACTTGTCCAAACTGACCCTATTCACAAGGGACCGAATTTACGGCG
TACGAAATATTTCAAATACCTGTTTACACGACATCAGTATGGAAGAAAAA
ACTGCGGAATTCTCACAACAAAATCCGAATACTGGTAAATCCATCTGGAA
AAAACGACGACAGTTTACTAGGAGACAAGACACTTTAAAATTGGTCTAAG
CGGTGACGGAGAAATTGGAAGATCCATTACTTCATCAACAATACAAACGA
AACGAAGAAGATCGTGTGGTTCATGCGTGCGATAATGGTATCATGCTCAC
GGAGAAACAGATCGAGGAGAAGAGATTACCTAAGAAACCGCTCGTCCCGC
TTGGTAGACACGATACGGAGTGCAGTACATGGCTAGATATGAAACTCTAT
GATATTCAAAGTGAAGTTCGACTTCGAAGCCAGGACATATTTTCCTGGAC
ATATATGAAGAAGCAGAATACGATCCAATGTCACTCAATAAGAAACGACC
TGGACCAATAAAGAATAAGATATGCCAGGAAATGAACGGTTTTCAATGGC
AGAAATTCGATCAAGAAAAAAGAAAACAATTTATCAAATATCTTAAACAT
CGAAATGAAAAGGATTTAGATGATATTATAACATATGATCGAATACGGAA
AGATCGCAAATTACAATGGCTCTTACAAAAGTGGTACGAGAAGACCTACA
TTCCACTTGATAAAAAGACAGATTTCGAATCGAAAGAGATGGCCAACATG
TATCACAGTTTACTCGATAGCGAAGAAAGACTTCAAAAGTATATTTCCAA
AGATGATTCCAACATTACACCGTTTCAACCAAATTACTCTTGTAGTAATG
TGAACCTTCGGCGAAGTAATTCTTCAAATTATATTGGTTGTTGGCTCAGT
GAAAAGTCAATCAGAAACCTCCAGATGCTCGAACAAACCACTGGTCGCAC
TAAACTATTGACACGTTCGAAAACAGCTGGCAGTATCAAAGTTCATTCTT
CAGATTTCACCAATGAACTTGTCCAAACTGACCCTATTCACAAGGGACCG
AATTTACGGCGTACGAAATATTTCAAATACCTGTTTACACGACATCAGTA
TGGAAGAAAAAACTGCGGAATTCTCACAACAAAATCCGAATACTGGTAAA
TCCATCTGGAAAAAACGACGACAGTTTACTAGGAGACAAGACACTTTAAA
ATTGGTCTAAGCGGTGACGGAGAAATTGGAAGATCCATTACTTCATCAAC
AATACAAACGAAACGAAGAAGATCGTGTGGTTCATGCGTGCGATAATGGT
ATCATGCTCACGGAGAAACAGATCGAGGAGAAGAGATTACCTAAGAAACC
GCTCGTCCCGCTTGGTAGACACGATACGGAGTGCAGTACATGGCTAGATA
TGAAACTCTATGATATTCAAAGTGAAGTTCGACTTCGAAGCCAGGACATA
TTTTCCTGGACATATATGAAGAAGCAGAATACGATCCAATGTCACTCAAT
AAGAAACGACCTGGACCAATAAAGAATAAGATATGCCAGGAAATGAACGG
TTTTCAATGGCAGAAATTCGATCAAGAAAAAAGAAAACAATTTATCAAAT
ATCTTAAACATCGAAATGAAAAGGATTTAGATGATATTATAACATATGAT
CGAATACGGAAAGATCGCAAATTACAATGGCTCTTACAAAAGTGGTACGA
GAAGACCTACATTCCACTTGATAAAAAGACAGATTTCGAATCGAAAGAGA
TGGCCAACATGTATCACAGTTTACTCGATAGCGAAGAAAGACTTCAAAAG
TATATTTCCAAAGATGATTCCAACATTACACCGTTTCAACCAAATTACTC
TTGTAGTAATGTGAACCTTCGGCGAAGTAATTCTTCAAATTATATTGGTT
GTTGGCTCAGTGAAAAGTCAATCAGAAACCTCCAGATGCTCGAACAAACC
ACTGGTCGCACTAAACTATTGACACGTTCGAAAACAGCTGGCAGTATCAA
AGTTCATTCTTCAGATTTCACCAATGAACTTGTCCAAACTGACCCTATTC
ACAAGGGACCGAATTTACGGCGTACGAAATATTTCAAATACCTGTTTACA
CGACATCAGTATGGAAGAAAAAACTGCGGAATTCTCACAACAAAATCCGA
ATACTGGTAAATCCATCTGGAAAAAACGACGACAGTTTACTAGGAGACAA
GACACTTTAAAATTGGTCTAAGCGGTGACGGAGAAATTGGAAGATCCATT
ACTTCATCAACAATACAAACGAAACGAAGAAGATCGTGTGGTTCATGCGT
GCGATAATGGTATCATGCTCACGGAGAAACAGATCGAGGAGAAGAGATTA
CCTAAGAAACCGCTCGTCCCGCTTGGTAGACACGATACGGAGTGCAGTAC
ATGGCTAGATATGAAACTCTATGATATTCAAAGTGAAGTTCGACTTCGAA
GCCAGGACATATTTTCCTGGACATATATGAAGAAGCAGAATACGATCCAA
TGTCACTCAATAAGAAACGACCTGGACCAATAAAGAATAAGATATGCCAG
GAAATGAACGGTTTTCAATGGCAGAAATTCGATCAAGAAAAAAGAAAACA
ATTTATCAAATATCTTAAACATCGAAATGAAAAGGATTTAGATGATATTA
TAACATATGATCGAATACGGAAAGATCGCAAATTACAATGGCTCTTACAA
AAGTGGTACGAGAAGACCTACATTCCACTTGATAAAAAGACAGATTTCGA
ATCGAAAGAGATGGCCAACATGTATCACAGTTTACTCGATAGCGAAGAAA
GACTTCAAAAGTATATTTCCAAAGATGATTCCAACATTACACCGTTTCAA
CCAAATTACTCTTGTAGTAATGTGAACCTTCGGCGAAGTAATTCTTCAAA
TTATATTGGTTGTTGGCTCAGTGAAAAGTCAATCAGAAACCTCCAGATGC
TCGAACAAACCACTGGTCGCACTAAACTATTGACACGTTCGAAAACAGCT
GGCAGTATCAAAGTTCATTCTTCAGATTTCACCAATGAACTTGTCCAAAC
TGACCCTATTCACAAGGGACCGAATTTACGGCGTACGAAATATTTCAAAT
ACCTGTTTACACGACATCAGTATGGAAGAAAAAACTGCGGAATTCTCACA
ACAAAATCCGAATACTGGTAAATCCATCTGGAAAAAACGACGACAGTTTA
CTAGGAGACAAGACACTTTAAAATTGGTCTAAGCGGTGACGGAGAAATTG
GAAGATCCATTACTTCATCAACAATACAAACGAAACGAAGAAGATCGTGT
GGTTCATGCGTGCGATAATGGTATCATGCTCACGGAGAAACAGATCGAGG
AGAAGAGATTACCTAAGAAACCGCTCGTCCCGCTTGGTAGACACGATACG
GAGTGCAGTACATGGCTAGATATGAAACTCTATGATATTCAAAGTGAAGT
TCGACTTCGAAGCCAGGACATATTTTCCTGGACATATATGAAGAAGCAGA
ATACGATCCAATGTCACTCAATAAGAAACGACCTGGACCAATAAAGAATA
AGATATGCCAGGAAATGAACGGTTTTCAATGGCAGAAATTCGATCAAGAA
AAAAGAAAACAATTTATCAAATATCTTAAACATCGAAATGAAAAGGATTT
AGATGATATTATAACATATGATCGAATACGGAAAGATCGCAAATTACAAT
GGCTCTTACAAAAGTGGTACGAGAAGACCTACATTCCACTTGATAAAAAG
ACAGATTTCGAATCGAAAGAGATGGCCAACATGTATCACAGTTTACTCGA
TAGCGAAGAAAGACTTCAAAAGTATATTTCCAAAGATGATTCCAACATTA
CACCGTTTCAACCAAATTACTCTTGTAGTAATGTGAACCTTCGGCGAAGT
AATTCTTCAAATTATATTGGTTGTTGGCTCAGTGAAAAGTCAATCAGAAA
CCTCCAGATGCTCGAACAAACCACTGGTCGCACTAAACTATTGACACGTT
CGAAAACAGCTGGCAGTATCAAAGTTCATTCTTCAGATTTCACCAATGAA
CTTGTCCAAACTGACCCTATTCACAAGGGACCGAATTTACGGCGTACGAA
ATATTTCAAATACCTGTTTACACGACATCAGTATGGAAGAAAAAACTGCG
GAATTCTCACAACAAAATCCGAATACTGGTAAATCCATCTGGAAAAAACG
ACGACAGTTTACTAGGAGACAAGACACTTTAAAATTGGTCTAAGCGGTGA
CGGAGAAATTGGAAGATCCATTACTTCATCAACAATACAAACGAAACGAA
GAAGATCGTGTGGTTCATGCGTGCGATAATGGTATCATGCTCACGGAGAA
ACAGATCGAGGAGAAGAGATTACCTAAGAAACCGCTCGTCCCGCTTGGTA
GACACGATACGGAGTGCAGTACATGGCTAGATATGAAACTCTATGATATT
CAAAGTGAAGTTCGACTTCGAAGCCAGGACATATTTTCCTGGACATATAT
GAAGAAGCAGAATACGATCCAATGTCACTCAATAAGAAACGACCTGGACC
AATAAAGAATAAGATATGCCAGGAAATGAACGGTTTTCAATGGCAGAAAT
TCGATCAAGAAAAAAGAAAACAATTTATCAAATATCTTAAACATCGAAAT
GAAAAGGATTTAGATGATATTATAACATATGATCGAATACGGAAAGATCG
CAAATTACAATGGCTCTTACAAAAGTGGTACGAGAAGACCTACATTCCAC
TTGATAAAAAGACAGATTTCGAATCGAAAGAGATGGCCAACATGTATCAC
AGTTTACTCGATAGCGAAGAAAGACTTCAAAAGTATATTTCCAAAGATGA
TTCCAACATTACACCGTTTCAACCAAATTACTCTTGTAGTAATGTGAACC
TTCGGCGAAGTAATTCTTCAAATTATATTGGTTGTTGGCTCAGTGAAAAG
TCAATCAGAAACCTCCAGATGCTCGAACAAACCACTGGTCGCACTAAACT
ATTGACACGTTCGAAAACAGCTGGCAGTATCAAAGTTCATTCTTCAGATT
TCACCAATGAACTTGTCCAAACTGACCCTATTCACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043269XLOC_043269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069426-exon-scaffold_5-1575043694:40134..40452TCONS_00069426-exon-scaffold_5-1575043694:40134..40452Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:39586..39720TCONS_00069426-exon-scaffold_5-1575043694:39586..39720Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:39338..39415TCONS_00069426-exon-scaffold_5-1575043694:39338..39415Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:38939..39037TCONS_00069426-exon-scaffold_5-1575043694:38939..39037Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:38439..38537TCONS_00069426-exon-scaffold_5-1575043694:38439..38537Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:38142..38222TCONS_00069426-exon-scaffold_5-1575043694:38142..38222Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:37464..37696TCONS_00069426-exon-scaffold_5-1575043694:37464..37696Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1575043694:35455..35861TCONS_00069426-exon-scaffold_5-1575043694:35455..35861Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:40134..40452TCONS_00069426-exon-scaffold_5-1510915933:40134..40452Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:39586..39720TCONS_00069426-exon-scaffold_5-1510915933:39586..39720Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:39338..39415TCONS_00069426-exon-scaffold_5-1510915933:39338..39415Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:38939..39037TCONS_00069426-exon-scaffold_5-1510915933:38939..39037Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:38439..38537TCONS_00069426-exon-scaffold_5-1510915933:38439..38537Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:38142..38222TCONS_00069426-exon-scaffold_5-1510915933:38142..38222Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:37464..37696TCONS_00069426-exon-scaffold_5-1510915933:37464..37696Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1510915933:35455..35861TCONS_00069426-exon-scaffold_5-1510915933:35455..35861Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:40134..40452TCONS_00069426-exon-scaffold_5-1491911889:40134..40452Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:39586..39720TCONS_00069426-exon-scaffold_5-1491911889:39586..39720Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:39338..39415TCONS_00069426-exon-scaffold_5-1491911889:39338..39415Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:38939..39037TCONS_00069426-exon-scaffold_5-1491911889:38939..39037Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:38439..38537TCONS_00069426-exon-scaffold_5-1491911889:38439..38537Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:38142..38222TCONS_00069426-exon-scaffold_5-1491911889:38142..38222Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:37464..37696TCONS_00069426-exon-scaffold_5-1491911889:37464..37696Clytia hemisphaericaexon
TCONS_00069426-exon-scaffold_5-1491911889:35455..35861TCONS_00069426-exon-scaffold_5-1491911889:35455..35861Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069426-proteinTCONS_00069426-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:35455..40452 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.4822	14.0113	8.63552	7.81566	94.1466	69.3124	36.835	36.6505	20.5327	28.683	17.6535	16.6461	7.46609	5.50447	5.64461	6.44048	8.14859	8.79162	13.1785	10.3587	9.05879	8.64853	25.3501	23.7616	83.6343	57.2335	24.6369	27.1292	16.011	15.9573
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069426 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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