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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069416 ID=TCONS_00069416|Name=TCONS_00069416|organism=Clytia hemisphaerica|type=transcript|length=1145bp
gaaagtttgaGCGCCTAAAGTAATActtacaaataaaaataacaggTTGT
TTTCGGTATGATCGAATAATAGGGAAGGAAACAAATTATAATTGAATGTA
TGttttttaaattacatttaAATTCTATTTACAAAGATTTGTATTAAATC
ATgctacatttttttgtttgtatcAAAAATAAAGTTAATTGTAATCATCA
TCTATCCGGTCAAAATTATTGACATCGTTAACATATTGCCAAAAAACATA
CGAATTATAAAAGAGCTTATTGCGATACCAACTACCACACTTGTGTAGTG
TCCTGGGAAAGGTTTAAAGTCAACCCTATTTCTAAGCCTAATGCATCGAC
AAAAGGAGAACTGTTCTCATTTCCAGACTTGAATACTGTTGACTACTTGT
GTAGCTatgttacaaaaaaaaacactgtCTTTAGGACAAAGTACTGTAAA
GGTATTTAGGTTACATGAACCCATCAGGAACTGGTGGTCAGGAACTGGGT
ATATAGCACATGTCtgatttctttcgaaatgaaTTTAATGGATGACGAAA
AAGGAAACTATTTGACCTTGCCCTCCCATCCCAATACAATTCTTGTTTTA
AATGATTGCATATTTTTCCATTCATCTGACGGCGAGTGAAGGAAATCTCC
TCACAGGCATTCTAAAATAGCAGCCAGGGGGTTTGTATTACAATCAAATG
AATCTCCAATTTCCTCTCAACGTTTTCTGTcataatacaaaataaaatgt
cCAATAAACCAAATTGCTACGATGACGGTTTCACTCTAGAAATAGATTGT
ACCACCACGATGCATTATTCTCGTTTTGTTTGTGAAAAAAGGATAGTCAA
AACATCCATCATAACCGACCAACATCTTTTAGATGCAATGCTTACGTGAA
AGTCATTGACGTCTTTATTCTCAGTTGGACGGTTGAATCACGTATAGAAC
TAAACCCAGGGGGGTCAACCATTGACTCAGGTCAAACTCTTGGTCACCCT
TGAAAAGAATGGacatttgttgtttttgtagCTCGCCTTTTTCATAAATC
CTTcaacttcttcatcaaattttccatGAATTTCTTCTTTTCACGATCAG
ATTTTTTGAAGTTGATGTTGAGTTTGTTCAGCTTGCTTGTCGTGT Run BLAST on NCBI transcript from alignment at scaffold_5:149924..151128+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069416 ID=TCONS_00069416|Name=TCONS_00069416|organism=Clytia hemisphaerica|type=transcript|length=1205bp|location=Sequence derived from alignment at scaffold_5:149924..151128+ (Clytia hemisphaerica)
gaaagtttgaGCGCCTAAAGTAATActtacaaataaaaataacaggTTGT
TTTCGGTATGATCGAATAATAGGGAAGGAAACAAATTATAATTGAATGTA
TGttttttaaattacatttaAATTCTATTTACAAAGATTTGTATTAAATC
ATgctacatttttttgtttgtatcAAAAATAAAGTTAATTGTAATCATCA
TCTATCCGGTCAAAATTATTGACATCGTTAACATATTGCCAAAAAACATA
CGAATTATAAAAGAGCTTATTGCGATACCAACTACCACACTTGTGTAGTG
TCCTGGGAAAGGTTTAAAGTCAACCCTATTTNTGATACCAACTACCACAC
TCGTGTAGTGTCCTGGGAAAGGTTTAAAGTCAACCCTATTTCTAAGCCTA
ATGCATCGACAAAAGGAGAACTGTTCTCATTTCCAGACTTGAATACTGTT
GACTACTTGTGTAGCTatgttacaaaaaaaaacactgtCTTTAGGACAAA
GTACTGTAAAGGTATTTAGGTTACATGAACCCATCAGGAACTGGTGGTCA
GGAACTGGGTATATAGCACATGTCtgatttctttcgaaatgaaTTTAATG
GATGACGAAAAAGGAAACTATTTGACCTTGCCCTCCCATCCCAATACAAT
TCTTGTTTTAAATGATTGCATATTTTTCCATTCATCTGACGGCGAGTGAA
GGAAATCTCCTCACAGGCATTCTAAAATAGCAGCCAGGGGGTTTGTATTA
CAATCAAATGAATCTCCAATTTCCTCTCAACGTTTTCTGTcataatacaa
aataaaatgtcCAATAAACCAAATTGCTACGATGACGGTTTCACTCTAGA
AATAGATTGTACCACCACGATGCATTATTCTCGTTTTGTTTGTGAAAAAA
GGATAGTCAAAACATCCATCATAACCGACCAACATCTTTTAGATGCAATG
CTTACGTGAAAGTCATTGACGTCTTTATTCTCAGTTGGACGGTTGAATCA
CGTATAGAACTAAACCCAGGGGGGTCAACCATTGACTCAGGTCAAACTCT
TGGTCACCCTTGAAAAGAATGGacatttgttgtttttgtagCTCGCCTTT
TTCATAAATCCTTcaacttcttcatcaaattttccatGAATTTCTTCTTT
TCACGATCAGATTTTTTGAAGTTGATGTTGAGTTTGTTCAGCTTGCTTGT
CGTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069416-exon-scaffold_5-1491911889:149924..150234 | TCONS_00069416-exon-scaffold_5-1491911889:149924..150234 | Clytia hemisphaerica | exon |
| TCONS_00069416-exon-scaffold_5-1510915933:149924..150234 | TCONS_00069416-exon-scaffold_5-1510915933:149924..150234 | Clytia hemisphaerica | exon |
| TCONS_00069416-exon-scaffold_5-1575043694:149924..150234 | TCONS_00069416-exon-scaffold_5-1575043694:149924..150234 | Clytia hemisphaerica | exon |
| TCONS_00069416-exon-scaffold_5-1491911889:150295..151128 | TCONS_00069416-exon-scaffold_5-1491911889:150295..151128 | Clytia hemisphaerica | exon |
| TCONS_00069416-exon-scaffold_5-1510915933:150295..151128 | TCONS_00069416-exon-scaffold_5-1510915933:150295..151128 | Clytia hemisphaerica | exon |
| TCONS_00069416-exon-scaffold_5-1575043694:150295..151128 | TCONS_00069416-exon-scaffold_5-1575043694:150295..151128 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:149924..151128 + |
Blast
The following BLAST results are available for this feature:
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