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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069412 ID=TCONS_00069412|Name=TCONS_00069412|organism=Clytia hemisphaerica|type=transcript|length=1796bp
ttatttgtcaacacaggtcaggttctatatacaaaacTATATATACAAGC
TATATACAATTCTATATATATTGGCAGTAAAAACTGATGTGGACCTGCAG
GCTAAGAAACAAATTTTTGGCAAGCTTAGTTCAGACTAACCCTGGCTGAC
AAATCAAGAGTCACGAAcagaaaaatcgaaaatggtTAATTACTTGAACA
TACCAGCTATCGTTACCATCCTCGTCGTGCTGGCAGTTATCGCGACTTTC
CTCAACTCGCTCAGTATTTATATCATTGTCACCACCAGGCATCTCTGGAA
ACGAAACTCAAGTCTTCTGCTCATGAATCTACTTGTTGTCCATCTTTTCC
AAGGTGTTTTTGTTTTCCCATTCTACGCTGGCAAGAAAGTGAAACAAGAC
TTTTTACCAGCTCAAATCTTTGGGAATGGTTTTCGACTTTCCTACATGTT
AAGTTTCTACGGCGCATGTCTTGGCATACTACTAATTGCGATAGATCGAT
TTCTGGCAACCTACCTGCTGACTAAATACAAGACAATAGTCACAAGGAAA
CGTGTCAAAATCACATTGGCTGTCTTCTGGATTTACATCATTGGGCTCTG
TATGATTCCCTTCATCGACACCAGTGGCCCGCAAATGAAGACCAAATTTG
ACAACTCTACAAACCAAACGATTGAATACGAAGCGAAGAAATTTTACGTT
TATAATCAACAACGTGTATGGGTTTTATTCATGTTGATCGTCAATACAGC
TCTCCCTTACGTCCTGGTTGTTATGTGTTATTCATTCATTGCGTACCGTT
TAAAGAGTTTGCAAATCTACCATCCAACCAACATCGGTCAACCAGTCAAG
AAATCTAAATACGCTGTCAATAAAACCAATGAAACGGACGAATTGAAACC
GCTACGAAAGAAAGATGTAGAGAAGCACAAACAAGTCACTAAGCTAACCT
TCATCTTAACCCTAGCGTACGGTGTCTTCTGGACGCCTTCCATCATTTAT
TACCCATTGAAAGCAGATTGTAAAAGCTGCTTCCCTGAAAATTACGAGGA
CTCAGAATTGGAACAATACGTAGGCTTCATTACCAAGTATCTTGCTTTTC
TGGATGCAGCTGTAGCACCCTTGGTCTATTGTTTTATGCACCGTGAATTT
CAAAAGTCTTTGATAAGAATCAAAAGCAAGCTTCTAAAGCTACCCTTGCC
AGAACCTGACGTACCATCAACTAGTAATGATACAACCCTTCTGCAGTGAA
ATGAGAATCCGGAAATTTTCTCTGTGCTTTTTGACTGAAAAATACTGTTT
AAACCACTTTCCAACTGCTAGAGAGGTTCAAGGTAGACTTGGAGGTTCAT
TTAATCGAACAATTATTGACACTATGGTTTATATCTGCTTCAGGAGGATG
GTAACTGACAATGATAGTGCTTACAGGGTTACAGGGCCGTCTTACCTTGT
GTCAAACATTAAATTATGAGAGATTGCATATTTATTACTCTCTGTAACAT
GTGTATATCCTGGGCAGTCCTCTTCAAAAAGGAAATCTATGAGAACAGAC
TGATTGATGATAATTGTCATGGGCTATCGTCTCAATTTTAAcacatgatt
tttttatgattcacGGGGGACTTTCATTTACTGTAAATGTTATAAAATGT
aaagacttctttttttaaatatcagcTAAAATAACCTTCTTTGTAAATAG
GAATTTTATTGTATgagtgaattttgattttttttattagaattgtATAT
ATATGAACGTCTTAAGaataaataaaagatatttGATTTTGGGAAA Run BLAST on NCBI protein sequence of TCONS_00069412-protein >TCONS_00069412-protein ID=TCONS_00069412-protein|Name=TCONS_00069412-protein|organism=Clytia hemisphaerica|type=polypeptide|length=355bp
MVNYLNIPAIVTILVVLAVIATFLNSLSIYIIVTTRHLWKRNSSLLLMNL
LVVHLFQGVFVFPFYAGKKVKQDFLPAQIFGNGFRLSYMLSFYGACLGIL
LIAIDRFLATYLLTKYKTIVTRKRVKITLAVFWIYIIGLCMIPFIDTSGP
QMKTKFDNSTNQTIEYEAKKFYVYNQQRVWVLFMLIVNTALPYVLVVMCY
SFIAYRLKSLQIYHPTNIGQPVKKSKYAVNKTNETDELKPLRKKDVEKHK
QVTKLTFILTLAYGVFWTPSIIYYPLKADCKSCFPENYEDSELEQYVGFI
TKYLAFLDAAVAPLVYCFMHREFQKSLIRIKSKLLKLPLPEPDVPSTSND
TTLLQ Run BLAST on NCBI transcript from alignment at scaffold_5:114167..118948+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069412 ID=TCONS_00069412|Name=TCONS_00069412|organism=Clytia hemisphaerica|type=transcript|length=4782bp|location=Sequence derived from alignment at scaffold_5:114167..118948+ (Clytia hemisphaerica)
ttatttgtcaacacaggtcaggttctatatacaaaacTATATATACAAGC
TATATACAATTCTATATATATTGGCAGTAAAAACTGATGTGGACCTGCAG
GCTAAGAAACAAATTTTTGGCAAGCTTAGTTCAGACTAACCCTGGCTGAC
AAATCAAGGTATCAAGATTTCGATTTTCTGTACATTCAAAACTCTATGTG
AATTTCAAATACAATTTTTTAGAAGAATGCATAGAAAAAAATGTAATGTG
AATCTAGACTTGATCGATGTATTTTTAAATGTCTTTgggagcctcaaatt
gttcagcaagtatgaaatttaaaatttgaatatctcaaaAAGTACCTATC
AAaagattatgaaattttgcccaATGATAGGTGTTGGCAATttctaactt
ttgaaaaaatattttttttgatgacgtcaacaaaaattagcaaaaatcta
ttttggacaaaaaaatgatgacgtcatcaatttttaaaaattacttCCTC
TCGATAATATATGCATCTAAGGTGAAAATTTCATCCTAATTTGATCATTA
GTTTTttagatattcaaattttgagttttatgacgtcatcaattatgacA
TCATAAAGTACTTTTTCcctaatttcttaaaaaaagcgaaaaaaaataat
tgtattAACAGACAGCTATGAAATCTACAccctaatacgcttcttttaAC
GTATAAATGACCATGTCTAGTTATTAGGCCCCCGATTTTCTACGGCAAAT
TTATGTCTTTTTTGGACATGCCGTAAGTTACACGAGGTTATGAAAATGAA
TTAATAAAACATTTGTTGACAAATCTGAGAAGCAATGTCGTAAGCAGTTt
tattaaatatcttttttattttcttcattttttctcgTGACGTTTTACTG
GTCctttctaatttcaaaatttcatctgTAATTTCATAATCATTTTGTTC
GTGTTATGTATTCTTTGCATGTTTCACATGCAATCGTCTCCTAGGTGCTT
TATCATATTTGCTCAAAGTCAAGTAGAAGCCATCTCTTAGAATCACAAAG
TTTTTGTTCTTTCTCTTTCATACATGCCGTGTCTTTTTCACTCATAATTA
AAGATTGGTGATGTTTGCGTTTGCTTGGCAAGCTAATTTCTTTTTCGTTT
AATTTGTTCCGAGAAGggaaaaatatttatcattaACTTTGATGGTTTTT
TGATAAACAATATACCtgaagtggattaatttttcgGGGACTTTTTTCGC
GAGGTGACTATCtgaaattttcgcgtggattcaTGTTCGCGAATCAACCG
CTTTTTCCcctatttttttttcacctaACTTGCAAGATTTGGTCATAGGA
AAACAGACGAATACCAATTTTATAGAAAATGTATCGTTAGATAAcataga
taattttttttactcatttttgatttttaaagagcTTTTGCCAGCCGACA
CGCAGTCATTTTCAACCTCATGATAGGTCACCTGATTTTAAGTTCTAGAA
ACTTTTATTCTAAGAAAGCTTAGTACATTTCCCAAGCATTATAAATCAAT
ATATACACCAGTTTGTGTGATAACAAGCCACAAATCTATaagtaaaaaat
cttttgacTTTTGCATACTTCTCAAATTACGCTTTAAGGCATAGAGAACA
CTTTTAAATCTTGGTCAGAAGTTTTTAGCTAATTACAATTATCGGTGTCG
TTCTAGGTAGTGTGCTGTTTTGAATTTGTGCACGACCACCAGTAGTGTAC
ACAATCAATGTgtacacacgtttttttataaggaaattgacgctgaaaat
ggtccgagaaataagaaattgttaaggaactgctcaggctgagaataaga
aaacaagttaagaaacaGTAAGAGTTaaacttgaggctgaaattctccag
aaaaataaggaacttcaagctcggagccaagttaaggttctttacaaaaa
aatgtgTATGCTATTTTTTTGCCTGTCGTGAATTCCTCATATTCATGAAG
TAATCTTTTTATACGGAAACAACCCGAAAAACACCGGGCGCTCGCCAaca
gttttgaatttaaacaatgaaactggtagcaaacgcccggtgtttttcgt
gtttccgtataaaagattacgtcatgaatatcgaGAATAAATTCCGTTTT
GTCGGAATAAAGAAACTGAAAGTTATTAATTTGGAAATTACAAATCACTT
GCTTTCAttgtttgatattttattgGCAAGTCAATTAGCAGCTCTAATGA
TGAATCATTAATTAAGCAATAATTAAAACAATAATGAATAAAtcatttta
taagaatctttTCATAACATCTCAAAAGTAAATGATACATGTGTccatta
tttgattatatttattttcttataaaaaattttgatgtgaCGTAATTAAT
GGCAATGAAGTTTTTTGATAAGCTCAGCAGTTTCGTTTTTAAGAGGGCAG
ACGTCATAAAGGGAATAAATTGCTTCCCAAAAGGGGTTTTCGCGAAATTT
CTGATAGCAATTTATTTATTAGACTGTCTCTGGCGAGATGTGTGAAGTGT
GAGGATGATCTCAACAACTATTTCTGACTTTCCTAAAAATGATAATACTT
TTATTCCTCTTTAATCAGTGGTTTTTCTCAGTTTTTTAATAATAGCTTcc
ttattgttgttttttttttaataaatggTCAATTTAGTACTTGGTTTCTT
TTTATGGATCCAATTCGTTACGATTTTCTTGGTTTTCTATAAAGTAACTT
CCTTCATCCATTTTATTCTTGGAAGAGGGTATTGTATGTTTCCATTTCAT
CAAGAAAAGATTATGAATTTGCCAACTCGCTTCTGACAATGAATTTGTAG
TCAGTTTCAAACATCACTGCTCACTTGGTGAAAAAAGTTCATCTTGGAAG
TCTATCTGAAGACGCTTAGTGTACGGAGAATCGATTTAGCAGGTTTTAAG
TTAGAATGGTATTGCTGTAATCTATATCATTCGTGTCCTCAGTTTTATAG
ACAATCGACAATTACAGTTATTATTGCAGATAAAGGTATCTGGATGTCCT
GGATATGCTCGTATTTTCTACAAGAAATACACTTCTTATCATATACGGTA
TAtgcattattttctttaacgctATGTCTTCTCTCTTTTTATAGAGTCAC
GAAcagaaaaatcgaaaatggtTAATTACTTGAACATACCAGCTATCGTT
ACCATCCTCGTCGTGCTGGCAGTTATCGCGACTTTCCTCAACTCGCTCAG
TATTTATATCATTGTCACCACCAGGCATCTCTGGAAACGAAACTCAAGTC
TTCTGCTCATGAATCTACTTGTTGTCCATCTTTTCCAAGGTGTTTTTGTT
TTCCCATTCTACGCTGGCAAGAAAGTGAAACAAGACTTTTTACCAGCTCA
AATCTTTGGGAATGGTTTTCGACTTTCCTACATGTTAAGTTTCTACGGCG
CATGTCTTGGCATACTACTAATTGCGATAGATCGATTTCTGGCAACCTAC
CTGCTGACTAAATACAAGACAATAGTCACAAGGAAACGTGTCAAAATCAC
ATTGGCTGTCTTCTGGATTTACATCATTGGGCTCTGTATGATTCCCTTCA
TCGACACCAGTGGCCCGCAAATGAAGACCAAATTTGACAACTCTACAAAC
CAAACGATTGAATACGAAGCGAAGAAATTTTACGTTTATAATCAACAACG
TGTATGGGTTTTATTCATGTTGATCGTCAATACAGCTCTCCCTTACGTCC
TGGTTGTTATGTGTTATTCATTCATTGCGTACCGTTTAAAGAGTTTGCAA
ATCTACCATCCAACCAACATCGGTCAACCAGTCAAGAAATCTAAATACGC
TGTCAATAAAACCAATGAAACGGACGAATTGAAACCGCTACGAAAGAAAG
ATGTAGAGAAGCACAAACAAGTCACTAAGCTAACCTTCATCTTAACCCTA
GCGTACGGTGTCTTCTGGACGCCTTCCATCATTTATTACCCATTGAAAGC
AGATTGTAAAAGCTGCTTCCCTGAAAATTACGAGGACTCAGAATTGGAAC
AATACGTAGGCTTCATTACCAAGTATCTTGCTTTTCTGGATGCAGCTGTA
GCACCCTTGGTCTATTGTTTTATGCACCGTGAATTTCAAAAGTCTTTGAT
AAGAATCAAAAGCAAGCTTCTAAAGCTACCCTTGCCAGAACCTGACGTAC
CATCAACTAGTAATGATACAACCCTTCTGCAGTGAAATGAGAATCCGGAA
ATTTTCTCTGTGCTTTTTGACTGAAAAATACTGTTTAAACCACTTTCCAA
CTGCTAGAGAGGTTCAAGGTAGACTTGGAGGTTCATTTAATCGAACAATT
ATTGACACTATGGTTTATATCTGCTTCAGGAGGATGGTAACTGACAATGA
TAGTGCTTACAGGGTTACAGGGCCGTCTTACCTTGTGTCAAACATTAAAT
TATGAGAGATTGCATATTTATTACTCTCTGTAACATGTGTATATCCTGGG
CAGTCCTCTTCAAAAAGGAAATCTATGAGAACAGACTGATTGATGATAAT
TGTCATGGGCTATCGTCTCAATTTTAAcacatgatttttttatgattcac
GGGGGACTTTCATTTACTGTAAATGTTATAAAATGTaaagacttcttttt
ttaaatatcagcTAAAATAACCTTCTTTGTAAATAGGAATTTTATTGTAT
gagtgaattttgattttttttattagaattgtATATATATGAACGTCTTA
AGaataaataaaagatatttGATTTTGGGAAA Coding sequence (CDS) from alignment at scaffold_5:114167..118948+ >TCONS_00069412 ID=TCONS_00069412|Name=TCONS_00069412|organism=Clytia hemisphaerica|type=CDS|length=1068bp|location=Sequence derived from alignment at scaffold_5:114167..118948+ (Clytia hemisphaerica)
atggtTAATTACTTGAACATACCAGCTATCGTTACCATCCTCGTCGTGCT
GGCAGTTATCGCGACTTTCCTCAACTCGCTCAGTATTTATATCATTGTCA
CCACCAGGCATCTCTGGAAACGAAACTCAAGTCTTCTGCTCATGAATCTA
CTTGTTGTCCATCTTTTCCAAGGTGTTTTTGTTTTCCCATTCTACGCTGG
CAAGAAAGTGAAACAAGACTTTTTACCAGCTCAAATCTTTGGGAATGGTT
TTCGACTTTCCTACATGTTAAGTTTCTACGGCGCATGTCTTGGCATACTA
CTAATTGCGATAGATCGATTTCTGGCAACCTACCTGCTGACTAAATACAA
GACAATAGTCACAAGGAAACGTGTCAAAATCACATTGGCTGTCTTCTGGA
TTTACATCATTGGGCTCTGTATGATTCCCTTCATCGACACCAGTGGCCCG
CAAATGAAGACCAAATTTGACAACTCTACAAACCAAACGATTGAATACGA
AGCGAAGAAATTTTACGTTTATAATCAACAACGTGTATGGGTTTTATTCA
TGTTGATCGTCAATACAGCTCTCCCTTACGTCCTGGTTGTTATGTGTTAT
TCATTCATTGCGTACCGTTTAAAGAGTTTGCAAATCTACCATCCAACCAA
CATCGGTCAACCAGTCAAGAAATCTAAATACGCTGTCAATAAAACCAATG
AAACGGACGAATTGAAACCGCTACGAAAGAAAGATGTAGAGAAGCACAAA
CAAGTCACTAAGCTAACCTTCATCTTAACCCTAGCGTACGGTGTCTTCTG
GACGCCTTCCATCATTTATTACCCATTGAAAGCAGATTGTAAAAGCTGCT
TCCCTGAAAATTACGAGGACTCAGAATTGGAACAATACGTAGGCTTCATT
ACCAAGTATCTTGCTTTTCTGGATGCAGCTGTAGCACCCTTGGTCTATTG
TTTTATGCACCGTGAATTTCAAAAGTCTTTGATAAGAATCAAAAGCAAGC
TTCTAAAGCTACCCTTGCCAGAACCTGACGTACCATCAACTAGTAATGAT
ACAACCCTTCTGCAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069412-exon-scaffold_5-1491911889:114167..114324 | TCONS_00069412-exon-scaffold_5-1491911889:114167..114324 | Clytia hemisphaerica | exon |
| TCONS_00069412-exon-scaffold_5-1510915933:114167..114324 | TCONS_00069412-exon-scaffold_5-1510915933:114167..114324 | Clytia hemisphaerica | exon |
| TCONS_00069412-exon-scaffold_5-1575043694:114167..114324 | TCONS_00069412-exon-scaffold_5-1575043694:114167..114324 | Clytia hemisphaerica | exon |
| TCONS_00069412-exon-scaffold_5-1491911889:117311..118948 | TCONS_00069412-exon-scaffold_5-1491911889:117311..118948 | Clytia hemisphaerica | exon |
| TCONS_00069412-exon-scaffold_5-1510915933:117311..118948 | TCONS_00069412-exon-scaffold_5-1510915933:117311..118948 | Clytia hemisphaerica | exon |
| TCONS_00069412-exon-scaffold_5-1575043694:117311..118948 | TCONS_00069412-exon-scaffold_5-1575043694:117311..118948 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:114167..118948 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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