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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069392 ID=TCONS_00069392|Name=TCONS_00069392|organism=Clytia hemisphaerica|type=transcript|length=1118bp
TCTAGCTGTATGTGGAATTGATcatgttataatgttattggaatatgata
aagtataaaaaagtacagctactgtctaaatttgataaagacaggATGCA
ATCatgtttttggacttggacgtatTTGCCAGCATGGATTTCGTGTAAAC
TATAACGTgcaactgaaacgtttttgacGCATTGGtttaagggtacttac
aaagatcGTTTGGTTTTCAGTTggtgtaaagtaataattccagctcggcg
tgaatgactccataattcattgatttttagctttcattttggctaaattt
gcttttgcACACTTACGCTtgcgtcaatttattaattatgttggcgcatg
cgcctcttttcccatcttgcacccttattaaaaattgaatgttggtacaa
aagaaattttgcttggcgtgaggctaTCTTCGATGCGAGATTTTGTGGAA
TCCATACTGCACTGGCGTGTTTGGCTACAACAACAGCAGAGGGagacaat
caaaaatatgttctgttcgcgCCGGCCAACCAATCCAACCAACTTGGCAG
ACAAAAATGCTGGAGGACTCAGAAAATTGTCAGAATTTTTCATCAAGCGA
gcgaataaatattaaaaactaaactttgaaaccattttcctaaaaacctG
ACTagatttactaccgaccgactgacTGACTCTATTTTATGAAGATTTTT
GACACGAACGAAACATATATTTGATTGCCGCCAGATCACTGGATAAAATG
ACGACCAtcacatattatttttttattgttcacacatctggacgcagatt
gtgttttgtGACCTTGGCGCATGTTTTGGGATTTTTTGGTTGGAAACACC
CACCTGTTCATAATAGGTAACAAACATCCATGTTAGAGAATGGGTGGACC
CGCACACTTGAAACACTATTTTACCATAATTTCATCACCAATCATTAGTC
AAATAAATTACTTTGATGCTGTTAAAAGACAATACAGATCCACAAGTCCA
TTATTTTAAAGTTTATAATGTCAATTGTCTTTCTCAACATTTTCTgtctg
atttttacttttttgcttattttatatcaaaaataaaaaaataaaatttt
tatacaaattatcATGAT Run BLAST on NCBI transcript from alignment at scaffold_498:376499..377616 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069392 ID=TCONS_00069392|Name=TCONS_00069392|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at scaffold_498:376499..377616 (Clytia hemisphaerica)
ATCATgataatttgtataaaaattttatttttttatttttgatataaaat
aagcaaaaaagtaaaaatcagacAGAAAATGTTGAGAAAGACAATTGACA
TTATAAACTTTAAAATAATGGACTTGTGGATCTGTATTGTCTTTTAACAG
CATCAAAGTAATTTATTTGACTAATGATTGGTGATGAAATTATGGTAAAA
TAGTGTTTCAAGTGTGCGGGTCCACCCATTCTCTAACATGGATGTTTGTT
ACCTATTATGAACAGGTGGGTGTTTCCAACCAAAAAATCCCAAAACATGC
GCCAAGGTCacaaaacacaatctgcgtccagatgtgtgaacaataaaaaa
ataatatgtgaTGGTCGTCATTTTATCCAGTGATCTGGCGGCAATCAAAT
ATATGTTTCGTTCGTGTCAAAAATCTTCATAAAATAGAGTCAgtcagtcg
gtcggtagtaaatctAGTCaggtttttaggaaaatggtttcaaagtttag
tttttaatatttattcgcTCGCTTGATGAAAAATTCTGACAATTTTCTGA
GTCCTCCAGCATTTTTGTCTGCCAAGTTGGTTGGATTGGTTGGCCGGcgc
gaacagaacatatttttgattgtctCCCTCTGCTGTTGTTGTAGCCAAAC
ACGCCAGTGCAGTATGGATTCCACAAAATCTCGCATCGAAGAtagcctca
cgccaagcaaaatttcttttgtaccaacattcaatttttaataagggtgc
aagatgggaaaagaggcgcatgcgccaacataattaataaattgacgcaA
GCGTAAGTGTgcaaaagcaaatttagccaaaatgaaagctaaaaatcaat
gaattatggagtcattcacgccgagctggaattattactttacaccAACT
GAAAACCAAACgatctttgtaagtacccttaaaCCAATGCgtcaaaaacg
tttcagttgcACGTTATAGTTTACACGAAATCCATGCTGGCAAatacgtc
caagtccaaaaacatGATTGCATcctgtctttatcaaatttagacagtag
ctgtacttttttatactttatcatattccaataacattataacatgATCA
ATTCCACATACAGCTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069392-exon-scaffold_498-1491911889:376499..377616 | TCONS_00069392-exon-scaffold_498-1491911889:376499..377616 | Clytia hemisphaerica | exon |
| TCONS_00069392-exon-scaffold_498-1510915933:376499..377616 | TCONS_00069392-exon-scaffold_498-1510915933:376499..377616 | Clytia hemisphaerica | exon |
| TCONS_00069392-exon-scaffold_498-1575043694:376499..377616 | TCONS_00069392-exon-scaffold_498-1575043694:376499..377616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_498 | supercontig | scaffold_498:376499..377616 . |
Blast
The following BLAST results are available for this feature:
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