TCONS_00069381 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069381
Unique NameTCONS_00069381
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069381 ID=TCONS_00069381|Name=TCONS_00069381|organism=Clytia hemisphaerica|type=transcript|length=351bp
CaagaatttctttcaatttgtATTCAAATAAAGACATTGTGTTTGataca
aaaatataatatagATATATCCTCTAAAATAATTCATATATTTACAAAGT
CTTTCTAGCTCAAACCAGAAACAATTTATTCCAAGTCGAAATTTGGATTT
TAACTATACTGTTCCAAGCACATAAACTTATCTACCATCTCAAGTGTTTA
TAATTATTTGTTATACTGTTCATTTGCATACAATTAATAGTCTTTTTTCA
TTGATCACACCGCATGTTCAAAGTCTTTTCAAATACATCAATTTGGTTAT
CTTTAATAACCTGGAAGTCTCACTCTCCACCATTACATTAGTAAAAATTG
C
Run BLAST on NCBI

transcript from alignment at scaffold_498:118015..118365

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069381 ID=TCONS_00069381|Name=TCONS_00069381|organism=Clytia hemisphaerica|type=transcript|length=351bp|location=Sequence derived from alignment at scaffold_498:118015..118365 (Clytia hemisphaerica)
GCAATTTTTACTAATGTAATGGTGGAGAGTGAGACTTCCAGGTTATTAAA
GATAACCAAATTGATGTATTTGAAAAGACTTTGAACATGCGGTGTGATCA
ATGAAAAAAGACTATTAATTGTATGCAAATGAACAGTATAACAAATAATT
ATAAACACTTGAGATGGTAGATAAGTTTATGTGCTTGGAACAGTATAGTT
AAAATCCAAATTTCGACTTGGAATAAATTGTTTCTGGTTTGAGCTAGAAA
GACTTTGTAAATATATGAATTATTTTAGAGGATATATctatattatattt
ttgtatCAAACACAATGTCTTTATTTGAATacaaattgaaagaaattctt
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043234XLOC_043234Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069381-exon-scaffold_498-1491911889:118015..118365TCONS_00069381-exon-scaffold_498-1491911889:118015..118365Clytia hemisphaericaexon
TCONS_00069381-exon-scaffold_498-1510915933:118015..118365TCONS_00069381-exon-scaffold_498-1510915933:118015..118365Clytia hemisphaericaexon
TCONS_00069381-exon-scaffold_498-1575043694:118015..118365TCONS_00069381-exon-scaffold_498-1575043694:118015..118365Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:118015..118365 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	2.24849	1.20286	0.631614	1.56471	0	0.332788	0.498488	0.690246	1.27682	2.28371	0	0.768956	0	0	1.20781	0.706954	1.71879	0.781315	0.804736	2.39403	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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