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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069378 ID=TCONS_00069378|Name=TCONS_00069378|organism=Clytia hemisphaerica|type=transcript|length=1534bp
agttttttgacgttttttatattttttgaagaatacaACATgatgaaaat
gttcttatttacaAATACTGATGGTATTGTCATGTAAATGATGCGTGATG
GTGATAAAAAAGAACTGAAATTCCACATGTGGTCAGagtgagaaaaataa
aaagttttacaaatgaagattttggaaaagataaagaaggaaaaaaatga
atttatcaTTACATTGATTTTGTTGGTGAATCGGATTAGAAATTAAGATT
GAAAAAAGGGACTGGTGAGGACTAACTTCTCAGTATCTAGTATAGAGAAG
TTCAAATCAATGTTATGAAAaacccaaaattttccaaagagaaaaaaaca
caGTTATAACGTGAAAAAGAGGTGTTCCTTCAAGAGGTGAAGAAGAAGTC
AAGGCCCCTTCTACACGCCATATTCTGTATTTCTTTCAAAGTAGTGTTGC
CCTAGCATGTCTACCGTTGTCAAGGAAACATGCTTGAACAACACTACTTT
TACAGGTTGCTTTTGTTGTaatatttgtttcttttgtGCGGCAGATACTC
CACGAATCTTGCTCCCGGTGATGTTATTGACATTGTAATGTTTTCTATCT
GGGAAAATCACTCAAAAGTTATCGTGTCGAAGCGTTCATAAAGGGATCTA
TAAAATCCCTTTTAGATCAGCTCCAACTCCATAACTTGAGTATGATTCAC
CAACGTTTTTAAGGGAGTTCATTTGGCAGCTGTCATCCAAAGTATCCGTC
ATTCCTTCCATAACAAACATAAACCACGCATGCGTAGTATTATATTTCCG
ATGTAGTTCGATCGGCCCATCAAAACCTGCTTGAATGATTGGGATGCATC
TTTGAAGAAACCAGACTATACCAGAGGTGAAAGGCTTGCTTGAAGGACTT
CAAATTCCAAGAAAACCCAAAACTTGTGTAAAGTCCACGCCCAATTTCTC
GGACGGCTTTTGATTAGTTATGATTCTttgctttttgtttgtttggttTG
TTTAGGCTCGGCTTTTTCATCTACCATTATATATTAGATCGTTATTATTG
GTCGATGAGAGGGCAGGGTCGCCAATATCCTGAAAGAGGAAAGTCAAGTC
TCCCACCTACCCCCAAAAATACTGTTCTTGGAAATCGTATAAAACCAATC
CATGATTCTTATagtattttcaagttttttccattttctggtTAAAACTG
CTGCTCGAATTACAGCAATGACTTGACTACTACTTCACCAATGATAAACG
GTGAGCCATATCATAGGTGAAAATGCCATATGATCTGTTTTCGACTGAGC
ATACTACGATTATCCTTCACATAGTATTGTTCAttgtttgtattttacat
gGCTGCATCATTGATTTCACTGGATCTCCAAGTTTGATggcgaaaaaaca
tttttctcctCATTCCCTCCTCATCGTGGTTTTGTTATTGCCATCTTGTG
AACTGAGTGATTTAAGATCTGGAAGATTTGGTCTTATTTGTTGCTCCATT
TTGTTGTTAGacgttttttttctctctttcactC Run BLAST on NCBI transcript from alignment at scaffold_498:28159..29692 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069378 ID=TCONS_00069378|Name=TCONS_00069378|organism=Clytia hemisphaerica|type=transcript|length=1534bp|location=Sequence derived from alignment at scaffold_498:28159..29692 (Clytia hemisphaerica)
GagtgaaagagagaaaaaaaacgtCTAACAACAAAATGGAGCAACAAATA
AGACCAAATCTTCCAGATCTTAAATCACTCAGTTCACAAGATGGCAATAA
CAAAACCACGATGAGGAGGGAATGaggagaaaaatgttttttcgccATCA
AACTTGGAGATCCAGTGAAATCAATGATGCAGCcatgtaaaatacaaaca
aTGAACAATACTATGTGAAGGATAATCGTAGTATGCTCAGTCGAAAACAG
ATCATATGGCATTTTCACCTATGATATGGCTCACCGTTTATCATTGGTGA
AGTAGTAGTCAAGTCATTGCTGTAATTCGAGCAGCAGTTTTAaccagaaa
atggaaaaaacttgaaaatactATAAGAATCATGGATTGGTTTTATACGA
TTTCCAAGAACAGTATTTTTGGGGGTAGGTGGGAGACTTGACTTTCCTCT
TTCAGGATATTGGCGACCCTGCCCTCTCATCGACCAATAATAACGATCTA
ATATATAATGGTAGATGAAAAAGCCGAGCCTAAACAaaccaaacaaacaa
aaagcaaAGAATCATAACTAATCAAAAGCCGTCCGAGAAATTGGGCGTGG
ACTTTACACAAGTTTTGGGTTTTCTTGGAATTTGAAGTCCTTCAAGCAAG
CCTTTCACCTCTGGTATAGTCTGGTTTCTTCAAAGATGCATCCCAATCAT
TCAAGCAGGTTTTGATGGGCCGATCGAACTACATCGGAAATATAATACTA
CGCATGCGTGGTTTATGTTTGTTATGGAAGGAATGACGGATACTTTGGAT
GACAGCTGCCAAATGAACTCCCTTAAAAACGTTGGTGAATCATACTCAAG
TTATGGAGTTGGAGCTGATCTAAAAGGGATTTTATAGATCCCTTTATGAA
CGCTTCGACACGATAACTTTTGAGTGATTTTCCCAGATAGAAAACATTAC
AATGTCAATAACATCACCGGGAGCAAGATTCGTGGAGTATCTGCCGCaca
aaagaaacaaatattACAACAAAAGCAACCTGTAAAAGTAGTGTTGTTCA
AGCATGTTTCCTTGACAACGGTAGACATGCTAGGGCAACACTACTTTGAA
AGAAATACAGAATATGGCGTGTAGAAGGGGCCTTGACTTCTTCTTCACCT
CTTGAAGGAACACCTCTTTTTCACGTTATAACtgtgtttttttctctttg
gaaaattttgggttTTTCATAACATTGATTTGAACTTCTCTATACTAGAT
ACTGAGAAGTTAGTCCTCACCAGTCCCTTTTTTCAATCTTAATTTCTAAT
CCGATTCACCAACAAAATCAATGTAAtgataaattcatttttttccttct
ttatcttttccaaaatcttcatttgtaaaactttttatttttctcactCT
GACCACATGTGGAATTTCAGTTCTTTTTTATCACCATCACGCATCATTTA
CATGACAATACCATCAGTATTtgtaaataagaacattttcatcATGTtgt
attcttcaaaaaatataaaaaacgtcaaaaaact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069378-exon-scaffold_498-1491911889:28159..29692 | TCONS_00069378-exon-scaffold_498-1491911889:28159..29692 | Clytia hemisphaerica | exon |
| TCONS_00069378-exon-scaffold_498-1510915933:28159..29692 | TCONS_00069378-exon-scaffold_498-1510915933:28159..29692 | Clytia hemisphaerica | exon |
| TCONS_00069378-exon-scaffold_498-1575043694:28159..29692 | TCONS_00069378-exon-scaffold_498-1575043694:28159..29692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_498 | supercontig | scaffold_498:28159..29692 . |
Blast
The following BLAST results are available for this feature:
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