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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069340 ID=TCONS_00069340|Name=TCONS_00069340|organism=Clytia hemisphaerica|type=transcript|length=2846bp CAGCAATAATAGCTTCCGCTTGATATGCCTAAAACGATTTTAGTAAGATT TTATAGGAGATTCAGCGCCCGATTCCTCACAATTTTGTTACAATAGCGCT TGATTCTTAATCAACCCAAAATCGAATGAACGagtcatttttttttatga atatgtCAGGTCAACTGAGCTAACTCTTATACTGTtatagtgattttttt ttcaaccttaCTGATGAGATCGATGCTTGTTTTACACGAATGAGATGGTT CAAAGCTTGAAACTCACATGATGACAACTACTGCTTTGACAGAGTTTGAA AGAGCAGAATGCAGAAACTTTTTAGAAGGCCTCACAAACTCTGCAAAATC TGAAGAAGACAACGATTCTGCAAGTTTTCCACATGACAACCAATTTGAAT CCCTGTGTTTTTGTGTGATAGATGAGGAAATTCCAGGGGAACTCACTGAT ATCATAAACCGATTTCTTCATTATAGGAAATGTCCTGATATTCTTATTGG ACCACTGATCAGTTACGTGCTGAACAAGTTTCAAGATACTGATTTGACAC AGTTTAAACTTGAGAGAAAAGATGATGAATCCACAGaatACAATGCATCA AGTCTTTCAAAACATCTTTATCAAGTTTTTCTTAAGTCGTGTTTGGACTT CATATCCAATTTCGATTCAATGACTATACAAAAGAATCCACAGAGCTTTC ATGTCAGTCTACAAGCTGTACGTAACCGAAGGCGGAGAATGGAGGATCGT CATGTTTATTATACTGATTTGAATTCACTTCTTAACTTGGATGAGGCCCA GACTGGTCAAGCCCTATTTGCTGTATTTGACGGTCACGGTGGCATAGACG CAGCCAATTATGCAGCCTCTCATTTACTGACACATTTGAAAGCTTGTCCA AATCTAATAACGCAGCCTGGTGAAGCTCTTCACAAAGCTATCTTGAAAAC CGACGAGGAGTTTATAAAAAAAGGCAAACGTGAGAAATTAAGAAGTGGAG CGACGGCCGTGGTGGTACTTATCCAAGGATTGAACTTAACCGTTGCATGG CTTGGTGATTCACAGGTTGTGTTGTGTAAAGCAGGTGATGCTGTACAATT AATGGATCCTCATAAACCCAATAGACCTGACGAGCGTGCCCGAATCGAAT CACTAGGTGGATGTGTTGTAAACTTCGGCGGATGGCGTGTCAATGGTATT TTAGCCGTGGCACGATCAATCGGTGATTCTGAACAGAAACCGTACGTCAC TGGTGAACCGGATGTCGAAGAATACGAAATGGAAGGTGACGAGGAATTTG TAATCTTAGCGTGCGATGGATTGTGGGATACAGTGGAACCTTTCGACGCT GTACAATTAGTACGGAAATGTATGGAAGAAGGAACTCGAGATTCGGCTGC CGGCAAATTAGTTGATTTGGCTATCAAGCAACGATCAATGGacaatattt cgattttggtagtttattttgattttaatggaCCTGTTGTTTTCTCAGCG GATAATACAACGAATTCTGAAGAAATGTCAGAAGCAAATAATGAAGACGA AAAAGGAGACATTAAAGAAAACCatcaaaatgaagatttgaatgTCAAAG GTCAAGTAAGCGACGAGAGAGAAGAGACTCAAGAAAAAGCAAATGATGAA AAACCGGCTGCTCATACAGAGGGGACTGTGGCGACGGAAGGAACAATAAG TTCAAAAGAAAACACGTGATTGCTCCCGCTTGTCACGTGATCTGTAAACT GGTTTTATCGTTCGTTTGCTATGAGAGCTCATTGTAGGGGTTTTTGATAT CCGAAAGCCTCGTTTTTGTGATTGAGAGAGGCGTCAAAGGTGAATGCATT TTTTTTACGCCCAATTGTTCAGAAAATGTTGCTTTTTGACAAGTTTGCTC TTTTTGGCGATATGATTTTTTACGTATTTTATATATTGCGGAGAAAAGTA TGAATGGGAATTGTGTAACGCctttataaatgaaaaatttgctgGGAAGA GTGCCTAGATTGCCCTGTCCATAATGCCCATACCCAGCCCTGCCCTAATT TCCGTAGATTTCTTAAATTCGGAGAGCTTAGAATAAAATGTAATTCTTTG TTGCCCAAAAACTAATACTGTATTTTTCTTGCAATACAAAGATAAATTTA TGTATAATAAAATGTATGTATActcacaaaaaaatatatttatatcaTTC CTAAAACTCTTTATACCATTTTAGTTCATTTTATACTACTTTCTTTCTTA TATTGCgtatttatcattattttttctcaATATTGAAGAAGGGTTATCTT AGCACAACTTTTGTTCTTTGTTTAGCGGAGTGTTTTCCAGAAAACTAAGC CTTAGAAACCTTATTTTAGAGGTAGATTTAGCTTTGTGATAATAAGTTGT Tgtcaactacacgttttttaaaagaacatccaaaattttcgaagccatct taactttttgagttttaagcctaaaaatgttcttaacatgtttttatttt cctaatGTTATGACTATTTTTGTCCACTTTCTCAAGAATTTCGGTGCTTT TGAGTCctcaagccttaaaatgttcttaacttgtttttaacattttggcc ctatgttcttatatagtttgctcttataaaagaaaaacgtgtagtagACT TGAATATGTGAAACCACCGATCCTAGAAACTAAACTCACTAAGTATAACT GCATAGTATATTatcatcaatttttgttttgtttattgcgTATATATTAT ATTgcgtatatatatatattattatACTCGTTATTGTTATAAGACTTTTG TACGATAGTTtacttaaaaaatataatttgtattcCTACCTATAAA Run BLAST on NCBI transcript from alignment at scaffold_498:489543..506648+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069340 ID=TCONS_00069340|Name=TCONS_00069340|organism=Clytia hemisphaerica|type=transcript|length=17106bp|location=Sequence derived from alignment at scaffold_498:489543..506648+ (Clytia hemisphaerica) CAGCAATAATAGCTTCCGCTTGATATGCCTAAAACGATTTTAGTAAGATT
TTATAGGAGATTCAGCGCCCGATTCCTCACAATTTTGTTACAATAGCGCT
TGATTCTTAATCAACCCAAAATCGAATGAACGagtcatttttttttatga
atatgtCAGGTCAACTGAGCTAACTCTTATACTGTtatagtgattttttt
ttcaaccttaCTGATGAGATCGATGCTTGTTTTACACGAATGAGATGGTT
CAAAGCTTGAAACTCACATGATGACAACTACTGCTTTGACAGAGTTTGAA
AGAGCAGAATGCAGAAACTTTTTAGAAGGCCTCACAAACTCTGCAAAATC
TGAAGAAGACAACGATTCTGCAAGTTTTCCACATGACAACCAATTTGAAT
CCCTGTGTTTTTGTGTGATAGATGAGGAAATTCCAGGGGAACTCACTGAT
ATCATAAACCGATTTCTTCATTATAGGTAtgcagttgggtgtttaagata
aaaaatgcaattattgctcttttcggaaattattgccgaaaacggcaatt
tttttaacgatgaaatgctgaatcagcataatgtgttgtccttttaaggg
caaagatgtcagaggtgtttgaaaatagtaaaattgcatcgagaaaaagg
tttttcggatttttaaaagtgattttttaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNcaataacatgaaaagttctaaaataatatgttaaaagat
cctgcatcgatgccgaaacacagccagaaagagataacaaaacccccgtt
gtaaatttgtttacatatatgactcgattttgctacctgcatttccaaca
aaaaccagttgaaaacaaaactaaacgaggcacagtgggtctacttatcg
cgagggtgtgaaataccacgtgttcaataataaaatcaacttttatttgc
aaaaacggcaataattgccgaaaacggcaattttcatttatttacttttt
tatttttccgctgattcagcatttcatcgttaaaaaaattgccgttttcg
gcaataatttccgaaaagagcaataattgcagtttttatcttaaacaccc
gaatGGTATGTAATAATTCTCATGAAATTTTTTACAgtatttttaaatta
atttatcACAATTTCAAGCNACCTTATCGGAAATTCTACAAAAACAATTG
CGCTAAAATGGATCCGTTgaaattgggaggtaaacataaatggtAGCGAG
AGTAGCGACGGTATGGCTAGCAATCCATGGAGTACGCTCGCGTAGTACGG
CCCAGCTTCAACACTACATTTCGTCACGTAAATATACTACATGAATTCTG
TGCCTGTATAAAAGATCCCGCGCAAAACAAGAACTCATTTGCTTAAATCT
GGCTTGTTtatgttcctaaaaatacactgaatttgaaaaaaacaaacaaa
acaaagctttcaagatgctagcagaagctgttagaaagagaaaaacaaca
acttcggTGGTTCTTCAGTTGATTTGGAGGCTCTATTGGCATCAAcattt
tgggtgttttgtaaggctttttgcctgaaaatcgCAATATCGagctttgt
ttacctcccaaaaagtgttgcgtagcaacaacgcgaggaggtggaatttc
cgataaggtgtatttGAAGTACAGCCCAGTTTGCCAGAGTGTGGCACGTT
TGCTCGAGATCTCGAGTGCACGACTCGGAAAAAGTCGAGTGCAGGTTCAA
ATtttgaggttttcaggtgcaagtgCAGATGGTTTTTTTTAACCCCGAGT
GCAGAGTTCTGCTATTTTCTCCTCAAGAACAAGTCAAGAGAGATCAGcgc
taattttagcaatttttgttattttgggtCAATTTCCAAGGTATAGGTGC
ACCTTTTCAGGATTAAAATTTATCAGGTGCGCTCTTCCAGTGCGGAACTT
GGTATTTCGGAATTTTTCGTCGAGCGCAGCCTtgtcatagaccttttttc
aaagaggctaccctgttgaataaattatgtagtccagcagaaaaacaatg
ataaaactatgcataattattacaatatgcatgatacagtaattatgcat
ggctctatcattgtttttatggctggactacataattattcaacaggagg
tcctctttgaaaaaaggtctatactctgcaaactggaaGTACAGTACACC
ACCAGGcaatgtcaaccgaaccctatcgaactGATTTATTTAATCAAACC
ATCAAAATAAATTGAACCTAGTCAAACGATACCGTGAGTCAGGGGTatct
tgcatcagtggagggaaacttgcatagccatcaaatgactgaccaatcaa
agcagcaaaatttcaaaacaagtgaAATACGCAGCTCCGCtagcagctct
actctaccagtatagacttaaactcgtatatcaagattacaggatttcgA
GTACAGgccaattttactttcgttttgagtggtttcattttcaatttgca
ACAGgatgctcgcccatagttacagggttttgtgcaaaaaaactaAGCAT
AGAAagttttctatgtttcacttttttgcacctatctgcctattcttcaa
aatgaaaatatttaagattttaaattcttcttttattcaaaattattttt
tacggcactttgttggcAATCTagctctcgcatcaaattcccgctttctt
cagtaaattgaagatgagaaaaaacctaagccacggatcacggattgaaa
caaatatatgaagggtgggattttacagccgcttGTCCTGCATGGGCATT
GAGAGACCAAAAAGAAGGGCTGTTTGAAAtgtggcaacctcattggttaa
aatatgataaacagctgcgaaggagcgctgggaagcaatcagtagaagag
accattttcgtttttgttgcagattttgatataagcttctctcagggatt
acttgtcaatgtacatgtacacatgtgttgtttcaacttgtcagcattgt
attaatgtaaaggaaaagataaaagagctaagactagcctagtttctaat
cctgatataggagtttaagtttagactgtctACCATTTTCGTTTTgactt
aactttgtattttaatgaccagccaagtcattcattttagggctatgcat
gttagcctccactgatgcaagttaaccGATCTCACGGTAAGTGTTTGAAT
ACCGTGGAAATTACCGTGAAGTTgtgtaacttgcatcagtggaggaaaAC
TTGTATAACTATCAAATAAAAAACCCATAAAAGCAgcaacatttcaaaaa
aaatcaactagctaccgtcaactgctctaacttgggactagctgacaaaa
catgggacagcaattcagccaccatttcaccgaacctccaaagtcatttg
attttaGTTAATGAACGACGTATTAAGAAATATATACATAATTTCTCTTT
TGCAtcgaaaaaatcgaaaaacattCCGTAGTGAAACACACGggagtgtc
tgtgcactctaagaggaacaaagaagtatgattgataaacttggtggagt
tatcaaaacaaatttgttgtcaaagagatttaacagtaagtgaaaataca
ggccagatattaGAGCCAGTTTTTCTAAGAGTGGGgcaggtccaatagtt
tgaaacttagatttttttcatttttggatatgttattttttaagtataat
gaactgagtaaaatcccaaattCTTTTagtctgaaaatccataatggcgg
atttatggcaatttgaagtttttgggattttttggCATTGCACTTAAATT
GATTTTTGTTATGAAATTATGCTTTCTCATATCAGAATGAGGAATTCTTT
TTTGGGTATCCTGAAAATATGGTTAGTTATAGTTATACAACGGTTTTGTC
ATCCATTTTTGGACTTTTATATAAAGGCAtatgtttcaaaattcaaaaga
tcTCTTAAACTCCATCCTGTCTATAGATCTTTTGAATTCACATTTGATTT
CCCTGGAAACCTTTCTGGGTTTGGTTGAAGAAAAATATGATAATggcatc
aaaattattttttattggcCAATTGTTGGGTGCAATGGAATGTCTTCAGC
TCaagtagaaaaattgaaaaaagcgtACTTTTGGAccaaaaatgaacttt
tgaCAACTTTTTCATCCTAATCTCATGGTTTTATTATGAAGTATTTGTCT
TAGCCCTAATTTTCCATCAAATTCATGGACCTAGATCCCTTCAAAGTTTT
CCAATGAACCAAAATATTccattttttggtcattttttgagcgaagttta
aaagaatttcaaattgagataaaaaattaatggagcaaggtcacataggt
ttctcttttgtTCCTGAGAGACTAAGAGGTTGTCTCTGAGGAACAAAAGA
GTTGGAGGCCAGACAATGTTGGGATCTCTGGAAAATGGGAgctaaagttg
gtacttttttcAGACATATCAGGCTTTTCAGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAgcgtttttgtgacgtcat
agctcaggctaccattttgaaaattttgattttttttgaaaattggatag
TTGACCGCCCATATTTTCAGAATAACCAAAAAAGAATTCCTCATTCTGAT
GTGAGAAAGCATAATTTCATAACAAAAATCAATTTAAGTGCAATgccaaa
aaattccaaaaacttcaaattgctataaatccgccattatggattttcag
accaaaaaattttgggattttactcagttcattatACTTaataacatatc
caaaaatgaaaaaaatctaagtttcaaactattggacctgcCCCAAATTG
CCCCATTCTtagaaaaactggctcttaacacgtcccatgtttcgaccaat
cgtcccaagttagagcagctccgcttgcagctctactctacgatctttgt
tttaatttaactttgtattttaatcatgttagcctccactgatgcaagtt
accccatCTCAAGGTGTCTTGATTAGTTAAATTTAGTCCAATTAAAAATA
CAGTTTGATGTTGTTCGATGCATGTTCCAGTAGTTAGACGAGTGTTTGAG
TAGTTAGACAAGTTTTTGAGTAGTTAAACGAGTGTTCAAGTAGTTAGATG
AGTGTTTTTAAAAGTAGTTCGATgcattttcaattcttttgatgaGTGTT
CGAATAGCAGAAAGCACAGtgcaatcaaaaagaaaatcgaaCCTATAGAA
CAATGATCGAACCTATCGAACATTGATCTAACCTATTGAACATTGATCTA
ACCTATCGAACATTGATCAAACCTAGcaaactttaattgaatcgagaGCG
GTCCATCAATCGAACTTTGCTGAATTTTCATAGTTTGATTACTGTTCCAT
TAGTTTGTTTAATGGAACAGTTCAATTGACATTGCCTGGAGTACAAATGA
AAAGAGTGGagcatcatttaaaaaaaaaaactaaaatgctctttttggaa
aattttgccgaaaaagacatttttttcatgatgaaatgttgaatcagcag
aaaagtaaaaaagtacAGTATACAGATGAAAATCACTGCTTTCGGCATTA
TTTGACAATTTTAGATagaaaaattgatttattgTTGAACAGgtagtatt
tatttttttgacattGCATACACAGTTAGGGTACAAACTATTGGTCACTA
CGAACCCTGCAAACCCTGCAAAAAACCCATATTTGCAAATCTTTGGTCAC
GAATTTGAAGGGTTTGCAGCGTTTGAAGGAGATTCAAACACAGTACCTCT
TGAGCTACTTTGTTTGCAGATATCACAGGAGTTGTAGCTGAATTTCAATC
TTTTCTCAGCAAAAAGAAATGTGCAAATCTTTGGGACATTCAAACCCTAC
AAACCCTacagaaaatttagaaaatctgccatatttgtttttattctttg
GTTTAATTTACTAAGATTAAAAACCCCTATTTGTTAGGAATGTCAAAATT
GGATGACTGACCAAGGATGAACCATGTGACTTTTCTTCTCTTTATTATCA
CAGCGGGCGGACTCACTTGTCAGAACAATTTTTAGCCATCCTTGAGTCGG
CGTTTGTTACAGCGGAGAAAAGAAATCATGTAGGCAATCAACAAATTTCA
GTCTACAAACCCTGCAGATTTGCGAATCTTTGGACAAAGTTGCAGGAGTT
GAATATCTTGTAGATGTTGTAGCAGATGAATGTGACCAATAGTTTGTACC
CTTAGTATGTCCAATCTGTTCAgatctgttttgtttttagctggTTTTTG
TCTGAATACAGACTAGCAAAATGGAGTCGtatataaaatctgaaaaacat
tTTCCTCAACCTTTAAAAAACTTCTGACAGTGACAGCTTTGCTCTTAAAG
GTCAACAACGGTATGTACTACAACATTCCCAAACATTCTAAGACATTCTG
GAACTAGTtagtaaataaaaggaaatgATCAGGAACATTCAAGAAGGTTC
TCTAGCATTCTCAGAATGTTCATGAACCCTACGAGCAGATTAGAAGTGAA
TCCAATTGATTTTTCCCTACAGCTGGCATTGTTTACACTGATAGATTACT
GAGAATCAGATATTTAATCAACCCCAAAATCTCAATTTGGCCATCTTCAA
GTACTAAGAAAGTGGAACGTAGCCATCAAAAATCTACTAAATCTTAAGTT
TAGAACAACCGGTTTGTTAGATTTGTTACATTTAAGAGAAATCTTGAGAA
ATGTTGGTAAACTTCTTCAGAAAATCATTTCCAGCTATTCATTGTTTCTA
AATATTTAGGGCTAAAAAACTTGCAATATTGACAGCACAGGGGGGGGGGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
cccagggtagttaaatactaaaatgggtggtatctatgtgttaaatgttg
aaaaaaatttactacctgggtagttaaaactggtaaaattagcaaatttt
cgctatttttgtaattcttttaattatttatatagatgacttttatgaaa
aaatctgaaaatttttataatttgaaaaaatttctgttggaaagttgttt
gctgtaaacaaaaaattctcgaaattttttgtcaatataaaaaacacttg
aattctaagggcaaaacattaatttttgcactgagtgaaaaatgtgtcac
agaaaatcatttgttagctttttttgtaaaatcagtccgaaaagcaacca
aaaaataggtggtctccatgacaaattgtcccaaaaacttttattactac
cagggtagtaaaatacctcttccaaaaGTCTGGGTGTTGGTGACATGTAA
AAATTTGTAagaatccttttactactcatatatgtctgagattttactaa
tGACCCCCCCCCTCCTCCCCTGGACAGCAGACCCcctaaatttcttgaaa
atctgGTTACTTTACAAGGGATTTCCAGAGGCTACTGAAAATTCCAGGCT
TATACAGTGATTGAAAATTGGGATTATCATTATTCTTTGGTGGAAAACAG
TACTTTTCgatgatttttcaaaaactttctcttGTGTTAGCTAAAGGGCC
TTATTTGCCTCACCAGTCCAGAAGAATTGcacttaagaaaattttttgaa
ttttactcAAAAATGCTTAGAGATCACATGgggttttatttttgtttctg
aaaccaggcaactttttttttcCAGGCTCAATTAACTGTTTGTCGCAACT
CTTGAAAATTTGAGGCAAATATTgcactttttgagtttaacaCCTTCTTA
TAGGGCCTGTAGAGCCCAGCCAGGCTGAGTAGAAgataaatttttcaaca
tttgatcTTTGTTAGTAGGTGAACAGTAtttggcaaaaataaaattacta
AGTAAGATGCTCAAGGcctaaaaattttgtaaaaaagtgaattttgtgCC
ATATCTAGGCGGTTTTTTATACAAGTACTCACACTTAACTGTGAGTACtt
tcagaaaaacaaaagaaactaaTGTGTCCTTAGTTGCAACTTAATTTTTT
CTATCAAAGTCAGACTTTTACACTTGGaaaaaaagtccaaatttcaacca
GCCGCCAGCAACGcgaccattatggatttttaggGCTTTTCATATTGTCT
AATAAATGTCCAAAAATGAAAGCAATTAAAATTTAATACCAACAAAGTTG
TCTAAAACTGTCTGATTCTTAGAGAATATGGATCTTAAACCAATTTACCG
TACATTAGGATCGGGGTGGGTACATCTCTGCTggactttcaaaaaatgtt
gatttGCCATCGTACCCAACCAACCCTACTACAAAACCTGCCAAATCAGA
GTCTTTATCTTGTCTGTCTCCCTCTATCTTATTaaaaccctattagcccc
aatttggtacagatgttctccatcatgatacaattttccaggaaaaaaaa
aaattggtgacgtcattcaaaaactgatgacgtcatcacaaaatttccac
ctgtcggaaaaaaacccaaatatatggtttacaaaaatgtctattacagt
cgaaccaataaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtcgaaccaataaagatatttcgattctgtttgaagattctgaa
aggtaaaagactgttctttaacataattgctggttttgcaatttccatga
agattttttcttaaaatctatgctgaagatgagtaaatNNNNNttgatga
cgtcataaatgatgacgtcatcattttcaaaaattttctttagatttttt
aaatttgtattatcaatgcctatcacgtgtcaaaatttgaaaacgattga
ataaatagtttagaagttatcagcactttaaaattttgagttttgaggat
tttagctgggttttatgtcatgtttcacaataaagtcataaaacctgatc
tggacaacttATGATCCTAAACTTttgtacaagtactcttaataagattt
tattaaaagtcgaaagtttcaagtcgtttgaaaaatttttctccaagata
taaacaaaagaactccagcatGGTAGATTCTAATAGGGTTTAAAGCGTAA
AACTTGTGAATTCCCTTATTCAGCTTTCctttcaaaatcaacaaaatata
aACAGAATGTTGATAATGTTGATACAAATaggcaaaatcaattttatttc
tgatcAACCAACCCATCTCTAAAGTCTAGGGTCAGATAACAACAAGTTTT
AAGTTCAGCCTAAGCTTGTACCTGCAAACTCCTTTGAGTTTTGTAAACAT
TGGAACCCAACAAGTGATTTTACtttattcttctttttgttACAGGAAAT
GTCCTGATATTCTTATTGGACCACTGATCAGTTACGTGCTGAACAAGTTT
CAAGATACTGATTTGACACAGTTTAAACTTGAGAGAAAAGATGATGAATC
CACAGGTATGTTTTAAGCAGAAATATTTATAATATCATGACTTTTCATTA
cattttagtttgatttttatttctaGTGGCCCTTCGTGGATGCAATTCTT
CAGCTgcctaaaagcttttgaattttttttggagcATGCCATAGCGTCAA
CCCCcctgacttttttttttgggggggggggttacacccaaaaaaatgca
aattaaAACTGGGAGCTAAAATACAGCCAAATATTTAGGGGGACCTGAGG
GGgacctgatatgtttggggggGCCTGGAATTTCAATGGCAAAGCTGGGG
GCTGACTATTCCTTCTactatttttctttatatcacCACATTTTCGTGCT
CGATTCACtcgttttattttcaaagacatttttaCTTATCATAGCgggcg
ccaaaatcaaaatcttctaaaattgcctACCCATTTTGCCTgaattttag
tcgacccaccacgctactgcacATTTCAAGAATGGCAAAAGAATAGAGAT
GTGATTTTCCTAAAAacgatatttttttttttttttttttttaNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGGTTTGGA
GTATGCGTAGCAaacgaaattgaaagccaacgaACTATGGTCACTTTTTC
CTAGTGGTCTTAGGTAGTCGAGATTCCTAATTTGGTTTTCTTCGCTTGTT
AAGATCAAGTCGATGAGGGATGGGTCATCAGTTCCTCTACATCGAGTTGG
TTCATTAACATGTTGATGGAGATAATATGCGTCTCTCAAAGCATTTAAGA
ATTTCTCTTCTTTGCTATCCTTCAGATGCGGGGTGGTCCAGTTTTCCCAA
TTGATTGTTGGAAAGTTGAAATCACCTAACAAACATTTGTGCGAATATCT
CTTGTTTAATGCAATGGACTTGATCAATAAGTTtaggttgttgttgtttt
cgttAGAGGACGTAGATCTAGTTGGGCTTCGATAAATGCATGCAACAGCG
AGCAAATATTTTCCTGATAGTTGTACTTCAATCATGCAAACTTCATTGAA
AGTCACTGGAGGCTGCTTGACATCGATTACCAAGTGTTTAATGGAGATAT
GGACAAATATGACAATGCCACGCCCTTGATCTGTATCTAGGTTAACTTGG
CTAGCAATTTTGTAATTGTAGTCATCGAATATAGGACTGGGGActgttta
aaaaacttttaatatttGGGGGACCtatttttttgcctgggacctagacC
TGGGCTGACCCTACGTGCCACTTAAAAcatatgttattattattattaat
tttgattctcatcttattctttttctttagaatACAATGCATCAAGTCTT
TCAAAACNTTCTTGttattattaattttgattctcatcttattctttttc
tttagaatACAATGCATCAAGTCTTTCAAAACATCTTTATCAAGTTTTTC
TTAAGTCGTGTTTGGACTTCATATCCAATTTCGATTCAATGACTATACAA
AAGAATCCACAGAGCTTTCATGTCAGTCTACAAGCTGTACGTAACCGAAG
GCGGAGAATGGAGGATCGTCATGTTTATTATACTGATTTGAATTCACTTC
TTAACTTGGATGAGGTTTGTTCTGCCATACTTGATAGATAACCTTTCACA
GGCCTGGCCCTGAACAATACCTTGCGCGTGCCAAAATAGCACTCCATAAA
AAATATGTCATGGATGATGAGAAACCACGAAATTTTCTGTTAAGCCAACC
TTAATTTCAGATTGACCCTTTTTACATAGTGAGGAAGGTCCAATCTGCAT
GAAAGAGGGTCATTCTCAAAACGTATggtcaaccaaatagaaaaatctTT
AGTTTTCTTGGACACTTATTTTGAAATTGGCCTCTTTCATTTGTCAACAA
CGACTGTAtacccccccccaaaaaaaaacttatatttttttgtgttaTAA
TCATTTACAACgtgtttattatttttctacTAGGCCCAGACTGGTCAAGC
CCTATTTGCTGTATTTGACGGTCACGGTGGCATAGACGCAGCCAATTATG
CAGCCTCTCATTTACTGACACATTTGAAAGCTTGTCCAAATCTAATAACG
CAGCCTGGTGAAGCTCTTCACAAAGCTATCTTGAAAACCGACGAGGAGTT
TATAAAAAAAGGCAAACGTGAGGTAAACAAtttataccgtaacttggtct
aatgtcgacatccctcatctaattccgacaccctttttatcagctgaaat
tgatagaaaggtcaaaactgtttttctttgcttagtggtcagagaggaat
aatcctttttgtatctaaagaagggtgtcggaattagaagagggatgtcg
acattagaccaacttacagtgcAGCAGTTAATACAAATACTCTCAGGTTT
CTAATAGAGGGTCTTGAATAAGCAAGGGGCGGGatgcaaatttttgcaaa
aaatgatTGCCAGAGAATTACTAAAATGTAAATTTACACAGCTAGTTAGT
CACCTGAGGGTTGattcaaaaagaataaaaattgcTAAACTTTTTAATGG
GATAACTTTTTGCTGATTTCACGGAATGTGTgtattcaaaaaattgaatt
ctaatggaaatttgaaaatgtattTAGACTTATTAGAGTCACTTATAATC
TGTGTAATAACAGGTAATAAAGGTGTTATATAATAATTGTCTGTATGTAT
TTCACTTTTTGCAGAAATTAAGAAGTGGAGCGACGGCCGTGGTGGTACTT
ATCCAAGGATTGAACTTAACCGTTGCATGGCTTGGTGATTCACAGGTTGT
GTTGTGTAAAGCAGGTGATGCTGTACAATTAATGGATCCTCATAAACCCA
ATAGACCTGTAAGTATCCCAGCTTCTTAATCTGATATCATGTGGTACAAA
TCAATTAGTATTCATGTAATAAAATCTACTGATAaatttttaaagctgtt
ttctTCAATTTGTTAGCTTTTGTATTTCTTGAAGCTGTTAACTGCTGTTC
GACACTACAATATTATGGTATAATTGTTAGGTATATCAATCTGAATTGTC
TAAATCAATATTAATTTGACATTTAGGACGAGCGTGCCCGAATCGAATCA
CTAGGTGGATGTGTTGTAAACTTCGGCGGATGGCGTGTCAATGGTATTTT
AGCCGTGGCACGATCAATCGGTGATTCTGAACAGAAACCGTACGTCACTG
GTGAACCGGATGTCGAAGAATACGAAATGGAAGGTCTGTATAACTAACTT
GCaactttcaaaagaaatatttcatgtTGACAAAAAGGTTGATAAAAGCA
TAGGCTAATAAACAACGTCAGTAACATTTTTATGGCAGCCCATCGTCACT
GCTACTGAAAATtgcatgttggatgaaattttctttctccTGAATAGATC
GCTAGCGATTAACACAATAAGGTTAAAAGCTTTGAAAAGggatgaagatt
tttcaaggaaattGATTATATTTTCCCAATTTACCTCTTAGGTGACGAGG
AATTTGTAATCTTAGCGTGCGATGGATTGTGGGATACAGTGGAACCTTTC
GACGCTGTACAATTAGTACGGAAATGTATGGAAGAAGGAACTCGAGATTC
GGCTGCCGGCAAATTAGTTGATTTGGCTATCAAGCAACGATCAATGGaca
atatttcgattttggtagtttattttgattttaatggaCCTGTTGTTTTC
TCAGCGGATAATACAACGAATTCTGAAGAAATGTCAGAAGCAAATAATGA
AGACGAAAAAGGAGACATTAAAGAAAACCatcaaaatgaagatttgaatg
TCAAAGGTCAAGTAAGCGACGAGAGAGAAGAGACTCAAGAAAAAGCAAAT
GATGAAAAACCGGCTGCTCATACAGAGGGGACTGTGGCGACGGAAGGAAC
AATAAGTTCAAAAGAAAACACGTGATTGCTCCCGCTTGTCACGTGATCTG
TAAACTGGTTTTATCGTTCGTTTGCTATGAGAGCTCATTGTAGGGGTTTT
TGATATCCGAAAGCCTCGTTTTTGTGATTGAGAGAGGCGTCAAAGGTGAA
TGCATTTTTTTTACGCCCAATTGTTCAGAAAATGTTGCTTTTTGACAAGT
TTGCTCTTTTTGGCGATATGATTTTTTACGTATTTTATATATTGCGGAGA
AAAGTATGAATGGGAATTGTGTAACGCctttataaatgaaaaatttgctg
GGAAGAGTGCCTAGATTGCCCTGTCCATAATGCCCATACCCAGCCCTGCC
CTAATTTCCGTAGATTTCTTAAATTCGGAGAGCTTAGAATAAAATGTAAT
TCTTTGTTGCCCAAAAACTAATACTGTATTTTTCTTGCAATACAAAGATA
AATTTATGTATAATAAAATGTATGTATActcacaaaaaaatatatttata
tcATTCCTAAAACTCTTTATACGTNATGTATACTcaccaaaaaatatatt
tataacaTTCCTAAAACTCTTTATACCATTTTAGTTCATTTTATACTACT
TTCTTTCTTATATTGCgtatttatcattattttttctcaATATTGAAGAA
GGGTTATCTTAGCACAACTTTTGTTCTTTGTTTAGCGGAGTGTTTTCCAG
AAAACTAAGCCTTAGAAACCTTATTTTAGAGGTAGATTTAGCTTTGTGAT
AATAAGTTGTTgtcaactacacgttttttaaaagaacatccaaaattttc
gaagccatcttaactttttgagttttaagcctaaaaatgttcttaacatg
tttttattttcctaatGTTATGACTATTTTTGTCCACTTTCTCAAGAATT
TCGGTGCTTTTGAGTCctcaagccttaaaatgttcttaacttgtttttaa
cattttggccctatgttcttatatagtttgctcttataaaagaaaaacgt
gtagtagACTTGAATATGTGAAACCACCGATCCTAGAAACTAAACTCACT
AAGTATAACTGCATAGTATATTatcatcaatttttgttttgtttattgcg
TATATATTATATTgcgtatatatatatattattatACTCGTTATTGTTAT
AAGACTTTTGTACGATAGTTtacttaaaaaatataatttgtattcCTACC
TATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00069340-exon-scaffold_498-1491911889:489543..490018 | TCONS_00069340-exon-scaffold_498-1491911889:489543..490018 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:489543..490018 | TCONS_00069340-exon-scaffold_498-1510915933:489543..490018 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:489543..490018 | TCONS_00069340-exon-scaffold_498-1575043694:489543..490018 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:499738..499847 | TCONS_00069340-exon-scaffold_498-1491911889:499738..499847 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:499738..499847 | TCONS_00069340-exon-scaffold_498-1510915933:499738..499847 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:499738..499847 | TCONS_00069340-exon-scaffold_498-1575043694:499738..499847 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:502948..503156 | TCONS_00069340-exon-scaffold_498-1491911889:502948..503156 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:502948..503156 | TCONS_00069340-exon-scaffold_498-1510915933:502948..503156 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:502948..503156 | TCONS_00069340-exon-scaffold_498-1575043694:502948..503156 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:503526..503714 | TCONS_00069340-exon-scaffold_498-1491911889:503526..503714 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:503526..503714 | TCONS_00069340-exon-scaffold_498-1510915933:503526..503714 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:503526..503714 | TCONS_00069340-exon-scaffold_498-1575043694:503526..503714 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:504257..504400 | TCONS_00069340-exon-scaffold_498-1491911889:504257..504400 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:504257..504400 | TCONS_00069340-exon-scaffold_498-1510915933:504257..504400 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:504257..504400 | TCONS_00069340-exon-scaffold_498-1575043694:504257..504400 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:504619..504775 | TCONS_00069340-exon-scaffold_498-1491911889:504619..504775 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:504619..504775 | TCONS_00069340-exon-scaffold_498-1510915933:504619..504775 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:504619..504775 | TCONS_00069340-exon-scaffold_498-1575043694:504619..504775 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:505034..505944 | TCONS_00069340-exon-scaffold_498-1491911889:505034..505944 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:505034..505944 | TCONS_00069340-exon-scaffold_498-1510915933:505034..505944 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:505034..505944 | TCONS_00069340-exon-scaffold_498-1575043694:505034..505944 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1491911889:505999..506648 | TCONS_00069340-exon-scaffold_498-1491911889:505999..506648 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1510915933:505999..506648 | TCONS_00069340-exon-scaffold_498-1510915933:505999..506648 | Clytia hemisphaerica | exon |
TCONS_00069340-exon-scaffold_498-1575043694:505999..506648 | TCONS_00069340-exon-scaffold_498-1575043694:505999..506648 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_498 | supercontig | scaffold_498:489543..506648 + |
Blast
BLAST of TCONS_00069340 vs. Swiss-Prot (Human)
Match: PPM1E (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 3.332e-82 Identity = 166/394 (42.13%), Postives = 239/394 (60.66%), Query Frame = 1
Query: 415 VIDEEIPGELTDIINRFLHYRKCPDILIGPLISYVLNKFQDTDLTQFKLERKDDES---TEYNASSLSKHLYQVFLKSCLDFISNFDSMTIQKNPQSFH-VSLQAVRNRRRRMEDRHVYYTDLNSLLNLDEAQTGQALFAVFDGHGGIDAANYAASHLLTHLKACPNLITQPGEALHKAILKTDEEFIKKGKREKLRSGATAVVVLIQGLNLTVAWLGDSQVVLCKAGDAVQLMDPHKPNRPDERARIESLGGCVVNFGGWRVNGILAVARSIGDSEQKPYVTXXXXXXXXXXXXXXXFVILACDGLWDTVEPFDAVQLVRKCMEEGTRDSA--AGKLVDLAIKQRSMDNISILVVYF-DFNGPVVFSADNTTNSEEMSEANNEDEKGDIKENH 1575
+ EE+ GE D+ + L+ CP L L ++ +DL+ + ++ D + E L++ ++ + C ++ +F +++ PQ ++ S+ A++N RR+MED+HV D N L NL E Q QA FAVFDGHGG+DAA YA+ HL +L P EAL +A TDE F++K RE LR G T VV I+G L VAW+GDSQV+L + G AV+LM PHKP+R DE+ RIE+LGGCVV FG WRVNG L+V+R+IGD+E KPY+ G+ D ++G E+++ILACDG +DTV P +AV++V ++E DS+ A KLV A S DNI+++VV+ D N V S + ++ E S +++ GD KENH
Sbjct: 144 ITREEVEGESLDLCLQQLYKYNCPSFLAAALARATSDEVLQSDLSAHYIPKETDGTEGTVEIETVKLARSVFSKLHEICCSWVKDF---PLRRRPQLYYETSIHAIKNMRRKMEDKHVCIPDFNMLFNL-EDQEEQAYFAVFDGHGGVDAAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNKAVNVSEE--SDWTENSFQGGQEDGGDDKENH 531
The following BLAST results are available for this feature:
|