TCONS_00069340 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069340
Unique NameTCONS_00069340
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2846

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069340 ID=TCONS_00069340|Name=TCONS_00069340|organism=Clytia hemisphaerica|type=transcript|length=2846bp
CAGCAATAATAGCTTCCGCTTGATATGCCTAAAACGATTTTAGTAAGATT
TTATAGGAGATTCAGCGCCCGATTCCTCACAATTTTGTTACAATAGCGCT
TGATTCTTAATCAACCCAAAATCGAATGAACGagtcatttttttttatga
atatgtCAGGTCAACTGAGCTAACTCTTATACTGTtatagtgattttttt
ttcaaccttaCTGATGAGATCGATGCTTGTTTTACACGAATGAGATGGTT
CAAAGCTTGAAACTCACATGATGACAACTACTGCTTTGACAGAGTTTGAA
AGAGCAGAATGCAGAAACTTTTTAGAAGGCCTCACAAACTCTGCAAAATC
TGAAGAAGACAACGATTCTGCAAGTTTTCCACATGACAACCAATTTGAAT
CCCTGTGTTTTTGTGTGATAGATGAGGAAATTCCAGGGGAACTCACTGAT
ATCATAAACCGATTTCTTCATTATAGGAAATGTCCTGATATTCTTATTGG
ACCACTGATCAGTTACGTGCTGAACAAGTTTCAAGATACTGATTTGACAC
AGTTTAAACTTGAGAGAAAAGATGATGAATCCACAGaatACAATGCATCA
AGTCTTTCAAAACATCTTTATCAAGTTTTTCTTAAGTCGTGTTTGGACTT
CATATCCAATTTCGATTCAATGACTATACAAAAGAATCCACAGAGCTTTC
ATGTCAGTCTACAAGCTGTACGTAACCGAAGGCGGAGAATGGAGGATCGT
CATGTTTATTATACTGATTTGAATTCACTTCTTAACTTGGATGAGGCCCA
GACTGGTCAAGCCCTATTTGCTGTATTTGACGGTCACGGTGGCATAGACG
CAGCCAATTATGCAGCCTCTCATTTACTGACACATTTGAAAGCTTGTCCA
AATCTAATAACGCAGCCTGGTGAAGCTCTTCACAAAGCTATCTTGAAAAC
CGACGAGGAGTTTATAAAAAAAGGCAAACGTGAGAAATTAAGAAGTGGAG
CGACGGCCGTGGTGGTACTTATCCAAGGATTGAACTTAACCGTTGCATGG
CTTGGTGATTCACAGGTTGTGTTGTGTAAAGCAGGTGATGCTGTACAATT
AATGGATCCTCATAAACCCAATAGACCTGACGAGCGTGCCCGAATCGAAT
CACTAGGTGGATGTGTTGTAAACTTCGGCGGATGGCGTGTCAATGGTATT
TTAGCCGTGGCACGATCAATCGGTGATTCTGAACAGAAACCGTACGTCAC
TGGTGAACCGGATGTCGAAGAATACGAAATGGAAGGTGACGAGGAATTTG
TAATCTTAGCGTGCGATGGATTGTGGGATACAGTGGAACCTTTCGACGCT
GTACAATTAGTACGGAAATGTATGGAAGAAGGAACTCGAGATTCGGCTGC
CGGCAAATTAGTTGATTTGGCTATCAAGCAACGATCAATGGacaatattt
cgattttggtagtttattttgattttaatggaCCTGTTGTTTTCTCAGCG
GATAATACAACGAATTCTGAAGAAATGTCAGAAGCAAATAATGAAGACGA
AAAAGGAGACATTAAAGAAAACCatcaaaatgaagatttgaatgTCAAAG
GTCAAGTAAGCGACGAGAGAGAAGAGACTCAAGAAAAAGCAAATGATGAA
AAACCGGCTGCTCATACAGAGGGGACTGTGGCGACGGAAGGAACAATAAG
TTCAAAAGAAAACACGTGATTGCTCCCGCTTGTCACGTGATCTGTAAACT
GGTTTTATCGTTCGTTTGCTATGAGAGCTCATTGTAGGGGTTTTTGATAT
CCGAAAGCCTCGTTTTTGTGATTGAGAGAGGCGTCAAAGGTGAATGCATT
TTTTTTACGCCCAATTGTTCAGAAAATGTTGCTTTTTGACAAGTTTGCTC
TTTTTGGCGATATGATTTTTTACGTATTTTATATATTGCGGAGAAAAGTA
TGAATGGGAATTGTGTAACGCctttataaatgaaaaatttgctgGGAAGA
GTGCCTAGATTGCCCTGTCCATAATGCCCATACCCAGCCCTGCCCTAATT
TCCGTAGATTTCTTAAATTCGGAGAGCTTAGAATAAAATGTAATTCTTTG
TTGCCCAAAAACTAATACTGTATTTTTCTTGCAATACAAAGATAAATTTA
TGTATAATAAAATGTATGTATActcacaaaaaaatatatttatatcaTTC
CTAAAACTCTTTATACCATTTTAGTTCATTTTATACTACTTTCTTTCTTA
TATTGCgtatttatcattattttttctcaATATTGAAGAAGGGTTATCTT
AGCACAACTTTTGTTCTTTGTTTAGCGGAGTGTTTTCCAGAAAACTAAGC
CTTAGAAACCTTATTTTAGAGGTAGATTTAGCTTTGTGATAATAAGTTGT
Tgtcaactacacgttttttaaaagaacatccaaaattttcgaagccatct
taactttttgagttttaagcctaaaaatgttcttaacatgtttttatttt
cctaatGTTATGACTATTTTTGTCCACTTTCTCAAGAATTTCGGTGCTTT
TGAGTCctcaagccttaaaatgttcttaacttgtttttaacattttggcc
ctatgttcttatatagtttgctcttataaaagaaaaacgtgtagtagACT
TGAATATGTGAAACCACCGATCCTAGAAACTAAACTCACTAAGTATAACT
GCATAGTATATTatcatcaatttttgttttgtttattgcgTATATATTAT
ATTgcgtatatatatatattattatACTCGTTATTGTTATAAGACTTTTG
TACGATAGTTtacttaaaaaatataatttgtattcCTACCTATAAA
Run BLAST on NCBI

transcript from alignment at scaffold_498:489543..506648+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069340 ID=TCONS_00069340|Name=TCONS_00069340|organism=Clytia hemisphaerica|type=transcript|length=17106bp|location=Sequence derived from alignment at scaffold_498:489543..506648+ (Clytia hemisphaerica)
CAGCAATAATAGCTTCCGCTTGATATGCCTAAAACGATTTTAGTAAGATT TTATAGGAGATTCAGCGCCCGATTCCTCACAATTTTGTTACAATAGCGCT TGATTCTTAATCAACCCAAAATCGAATGAACGagtcatttttttttatga atatgtCAGGTCAACTGAGCTAACTCTTATACTGTtatagtgattttttt ttcaaccttaCTGATGAGATCGATGCTTGTTTTACACGAATGAGATGGTT CAAAGCTTGAAACTCACATGATGACAACTACTGCTTTGACAGAGTTTGAA AGAGCAGAATGCAGAAACTTTTTAGAAGGCCTCACAAACTCTGCAAAATC TGAAGAAGACAACGATTCTGCAAGTTTTCCACATGACAACCAATTTGAAT CCCTGTGTTTTTGTGTGATAGATGAGGAAATTCCAGGGGAACTCACTGAT ATCATAAACCGATTTCTTCATTATAGGTAtgcagttgggtgtttaagata aaaaatgcaattattgctcttttcggaaattattgccgaaaacggcaatt tttttaacgatgaaatgctgaatcagcataatgtgttgtccttttaaggg caaagatgtcagaggtgtttgaaaatagtaaaattgcatcgagaaaaagg tttttcggatttttaaaagtgattttttaNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNcaataacatgaaaagttctaaaataatatgttaaaagat cctgcatcgatgccgaaacacagccagaaagagataacaaaacccccgtt gtaaatttgtttacatatatgactcgattttgctacctgcatttccaaca aaaaccagttgaaaacaaaactaaacgaggcacagtgggtctacttatcg cgagggtgtgaaataccacgtgttcaataataaaatcaacttttatttgc aaaaacggcaataattgccgaaaacggcaattttcatttatttacttttt tatttttccgctgattcagcatttcatcgttaaaaaaattgccgttttcg gcaataatttccgaaaagagcaataattgcagtttttatcttaaacaccc gaatGGTATGTAATAATTCTCATGAAATTTTTTACAgtatttttaaatta atttatcACAATTTCAAGCNACCTTATCGGAAATTCTACAAAAACAATTG CGCTAAAATGGATCCGTTgaaattgggaggtaaacataaatggtAGCGAG AGTAGCGACGGTATGGCTAGCAATCCATGGAGTACGCTCGCGTAGTACGG CCCAGCTTCAACACTACATTTCGTCACGTAAATATACTACATGAATTCTG TGCCTGTATAAAAGATCCCGCGCAAAACAAGAACTCATTTGCTTAAATCT GGCTTGTTtatgttcctaaaaatacactgaatttgaaaaaaacaaacaaa acaaagctttcaagatgctagcagaagctgttagaaagagaaaaacaaca acttcggTGGTTCTTCAGTTGATTTGGAGGCTCTATTGGCATCAAcattt tgggtgttttgtaaggctttttgcctgaaaatcgCAATATCGagctttgt ttacctcccaaaaagtgttgcgtagcaacaacgcgaggaggtggaatttc cgataaggtgtatttGAAGTACAGCCCAGTTTGCCAGAGTGTGGCACGTT TGCTCGAGATCTCGAGTGCACGACTCGGAAAAAGTCGAGTGCAGGTTCAA ATtttgaggttttcaggtgcaagtgCAGATGGTTTTTTTTAACCCCGAGT GCAGAGTTCTGCTATTTTCTCCTCAAGAACAAGTCAAGAGAGATCAGcgc taattttagcaatttttgttattttgggtCAATTTCCAAGGTATAGGTGC ACCTTTTCAGGATTAAAATTTATCAGGTGCGCTCTTCCAGTGCGGAACTT GGTATTTCGGAATTTTTCGTCGAGCGCAGCCTtgtcatagaccttttttc aaagaggctaccctgttgaataaattatgtagtccagcagaaaaacaatg ataaaactatgcataattattacaatatgcatgatacagtaattatgcat ggctctatcattgtttttatggctggactacataattattcaacaggagg tcctctttgaaaaaaggtctatactctgcaaactggaaGTACAGTACACC ACCAGGcaatgtcaaccgaaccctatcgaactGATTTATTTAATCAAACC ATCAAAATAAATTGAACCTAGTCAAACGATACCGTGAGTCAGGGGTatct tgcatcagtggagggaaacttgcatagccatcaaatgactgaccaatcaa agcagcaaaatttcaaaacaagtgaAATACGCAGCTCCGCtagcagctct actctaccagtatagacttaaactcgtatatcaagattacaggatttcgA GTACAGgccaattttactttcgttttgagtggtttcattttcaatttgca ACAGgatgctcgcccatagttacagggttttgtgcaaaaaaactaAGCAT AGAAagttttctatgtttcacttttttgcacctatctgcctattcttcaa aatgaaaatatttaagattttaaattcttcttttattcaaaattattttt tacggcactttgttggcAATCTagctctcgcatcaaattcccgctttctt cagtaaattgaagatgagaaaaaacctaagccacggatcacggattgaaa caaatatatgaagggtgggattttacagccgcttGTCCTGCATGGGCATT GAGAGACCAAAAAGAAGGGCTGTTTGAAAtgtggcaacctcattggttaa aatatgataaacagctgcgaaggagcgctgggaagcaatcagtagaagag accattttcgtttttgttgcagattttgatataagcttctctcagggatt acttgtcaatgtacatgtacacatgtgttgtttcaacttgtcagcattgt attaatgtaaaggaaaagataaaagagctaagactagcctagtttctaat cctgatataggagtttaagtttagactgtctACCATTTTCGTTTTgactt aactttgtattttaatgaccagccaagtcattcattttagggctatgcat gttagcctccactgatgcaagttaaccGATCTCACGGTAAGTGTTTGAAT ACCGTGGAAATTACCGTGAAGTTgtgtaacttgcatcagtggaggaaaAC TTGTATAACTATCAAATAAAAAACCCATAAAAGCAgcaacatttcaaaaa aaatcaactagctaccgtcaactgctctaacttgggactagctgacaaaa catgggacagcaattcagccaccatttcaccgaacctccaaagtcatttg attttaGTTAATGAACGACGTATTAAGAAATATATACATAATTTCTCTTT TGCAtcgaaaaaatcgaaaaacattCCGTAGTGAAACACACGggagtgtc tgtgcactctaagaggaacaaagaagtatgattgataaacttggtggagt tatcaaaacaaatttgttgtcaaagagatttaacagtaagtgaaaataca ggccagatattaGAGCCAGTTTTTCTAAGAGTGGGgcaggtccaatagtt tgaaacttagatttttttcatttttggatatgttattttttaagtataat gaactgagtaaaatcccaaattCTTTTagtctgaaaatccataatggcgg atttatggcaatttgaagtttttgggattttttggCATTGCACTTAAATT GATTTTTGTTATGAAATTATGCTTTCTCATATCAGAATGAGGAATTCTTT TTTGGGTATCCTGAAAATATGGTTAGTTATAGTTATACAACGGTTTTGTC ATCCATTTTTGGACTTTTATATAAAGGCAtatgtttcaaaattcaaaaga tcTCTTAAACTCCATCCTGTCTATAGATCTTTTGAATTCACATTTGATTT CCCTGGAAACCTTTCTGGGTTTGGTTGAAGAAAAATATGATAATggcatc aaaattattttttattggcCAATTGTTGGGTGCAATGGAATGTCTTCAGC TCaagtagaaaaattgaaaaaagcgtACTTTTGGAccaaaaatgaacttt tgaCAACTTTTTCATCCTAATCTCATGGTTTTATTATGAAGTATTTGTCT TAGCCCTAATTTTCCATCAAATTCATGGACCTAGATCCCTTCAAAGTTTT CCAATGAACCAAAATATTccattttttggtcattttttgagcgaagttta aaagaatttcaaattgagataaaaaattaatggagcaaggtcacataggt ttctcttttgtTCCTGAGAGACTAAGAGGTTGTCTCTGAGGAACAAAAGA GTTGGAGGCCAGACAATGTTGGGATCTCTGGAAAATGGGAgctaaagttg gtacttttttcAGACATATCAGGCTTTTCAGGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAgcgtttttgtgacgtcat agctcaggctaccattttgaaaattttgattttttttgaaaattggatag TTGACCGCCCATATTTTCAGAATAACCAAAAAAGAATTCCTCATTCTGAT GTGAGAAAGCATAATTTCATAACAAAAATCAATTTAAGTGCAATgccaaa aaattccaaaaacttcaaattgctataaatccgccattatggattttcag accaaaaaattttgggattttactcagttcattatACTTaataacatatc caaaaatgaaaaaaatctaagtttcaaactattggacctgcCCCAAATTG CCCCATTCTtagaaaaactggctcttaacacgtcccatgtttcgaccaat cgtcccaagttagagcagctccgcttgcagctctactctacgatctttgt tttaatttaactttgtattttaatcatgttagcctccactgatgcaagtt accccatCTCAAGGTGTCTTGATTAGTTAAATTTAGTCCAATTAAAAATA CAGTTTGATGTTGTTCGATGCATGTTCCAGTAGTTAGACGAGTGTTTGAG TAGTTAGACAAGTTTTTGAGTAGTTAAACGAGTGTTCAAGTAGTTAGATG AGTGTTTTTAAAAGTAGTTCGATgcattttcaattcttttgatgaGTGTT CGAATAGCAGAAAGCACAGtgcaatcaaaaagaaaatcgaaCCTATAGAA CAATGATCGAACCTATCGAACATTGATCTAACCTATTGAACATTGATCTA ACCTATCGAACATTGATCAAACCTAGcaaactttaattgaatcgagaGCG GTCCATCAATCGAACTTTGCTGAATTTTCATAGTTTGATTACTGTTCCAT TAGTTTGTTTAATGGAACAGTTCAATTGACATTGCCTGGAGTACAAATGA AAAGAGTGGagcatcatttaaaaaaaaaaactaaaatgctctttttggaa aattttgccgaaaaagacatttttttcatgatgaaatgttgaatcagcag aaaagtaaaaaagtacAGTATACAGATGAAAATCACTGCTTTCGGCATTA TTTGACAATTTTAGATagaaaaattgatttattgTTGAACAGgtagtatt tatttttttgacattGCATACACAGTTAGGGTACAAACTATTGGTCACTA CGAACCCTGCAAACCCTGCAAAAAACCCATATTTGCAAATCTTTGGTCAC GAATTTGAAGGGTTTGCAGCGTTTGAAGGAGATTCAAACACAGTACCTCT TGAGCTACTTTGTTTGCAGATATCACAGGAGTTGTAGCTGAATTTCAATC TTTTCTCAGCAAAAAGAAATGTGCAAATCTTTGGGACATTCAAACCCTAC AAACCCTacagaaaatttagaaaatctgccatatttgtttttattctttg GTTTAATTTACTAAGATTAAAAACCCCTATTTGTTAGGAATGTCAAAATT GGATGACTGACCAAGGATGAACCATGTGACTTTTCTTCTCTTTATTATCA CAGCGGGCGGACTCACTTGTCAGAACAATTTTTAGCCATCCTTGAGTCGG CGTTTGTTACAGCGGAGAAAAGAAATCATGTAGGCAATCAACAAATTTCA GTCTACAAACCCTGCAGATTTGCGAATCTTTGGACAAAGTTGCAGGAGTT GAATATCTTGTAGATGTTGTAGCAGATGAATGTGACCAATAGTTTGTACC CTTAGTATGTCCAATCTGTTCAgatctgttttgtttttagctggTTTTTG TCTGAATACAGACTAGCAAAATGGAGTCGtatataaaatctgaaaaacat tTTCCTCAACCTTTAAAAAACTTCTGACAGTGACAGCTTTGCTCTTAAAG GTCAACAACGGTATGTACTACAACATTCCCAAACATTCTAAGACATTCTG GAACTAGTtagtaaataaaaggaaatgATCAGGAACATTCAAGAAGGTTC TCTAGCATTCTCAGAATGTTCATGAACCCTACGAGCAGATTAGAAGTGAA TCCAATTGATTTTTCCCTACAGCTGGCATTGTTTACACTGATAGATTACT GAGAATCAGATATTTAATCAACCCCAAAATCTCAATTTGGCCATCTTCAA GTACTAAGAAAGTGGAACGTAGCCATCAAAAATCTACTAAATCTTAAGTT TAGAACAACCGGTTTGTTAGATTTGTTACATTTAAGAGAAATCTTGAGAA ATGTTGGTAAACTTCTTCAGAAAATCATTTCCAGCTATTCATTGTTTCTA AATATTTAGGGCTAAAAAACTTGCAATATTGACAGCACAGGGGGGGGGGG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN cccagggtagttaaatactaaaatgggtggtatctatgtgttaaatgttg aaaaaaatttactacctgggtagttaaaactggtaaaattagcaaatttt cgctatttttgtaattcttttaattatttatatagatgacttttatgaaa aaatctgaaaatttttataatttgaaaaaatttctgttggaaagttgttt gctgtaaacaaaaaattctcgaaattttttgtcaatataaaaaacacttg aattctaagggcaaaacattaatttttgcactgagtgaaaaatgtgtcac agaaaatcatttgttagctttttttgtaaaatcagtccgaaaagcaacca aaaaataggtggtctccatgacaaattgtcccaaaaacttttattactac cagggtagtaaaatacctcttccaaaaGTCTGGGTGTTGGTGACATGTAA AAATTTGTAagaatccttttactactcatatatgtctgagattttactaa tGACCCCCCCCCTCCTCCCCTGGACAGCAGACCCcctaaatttcttgaaa atctgGTTACTTTACAAGGGATTTCCAGAGGCTACTGAAAATTCCAGGCT TATACAGTGATTGAAAATTGGGATTATCATTATTCTTTGGTGGAAAACAG TACTTTTCgatgatttttcaaaaactttctcttGTGTTAGCTAAAGGGCC TTATTTGCCTCACCAGTCCAGAAGAATTGcacttaagaaaattttttgaa ttttactcAAAAATGCTTAGAGATCACATGgggttttatttttgtttctg aaaccaggcaactttttttttcCAGGCTCAATTAACTGTTTGTCGCAACT CTTGAAAATTTGAGGCAAATATTgcactttttgagtttaacaCCTTCTTA TAGGGCCTGTAGAGCCCAGCCAGGCTGAGTAGAAgataaatttttcaaca tttgatcTTTGTTAGTAGGTGAACAGTAtttggcaaaaataaaattacta AGTAAGATGCTCAAGGcctaaaaattttgtaaaaaagtgaattttgtgCC ATATCTAGGCGGTTTTTTATACAAGTACTCACACTTAACTGTGAGTACtt tcagaaaaacaaaagaaactaaTGTGTCCTTAGTTGCAACTTAATTTTTT CTATCAAAGTCAGACTTTTACACTTGGaaaaaaagtccaaatttcaacca GCCGCCAGCAACGcgaccattatggatttttaggGCTTTTCATATTGTCT AATAAATGTCCAAAAATGAAAGCAATTAAAATTTAATACCAACAAAGTTG TCTAAAACTGTCTGATTCTTAGAGAATATGGATCTTAAACCAATTTACCG TACATTAGGATCGGGGTGGGTACATCTCTGCTggactttcaaaaaatgtt gatttGCCATCGTACCCAACCAACCCTACTACAAAACCTGCCAAATCAGA GTCTTTATCTTGTCTGTCTCCCTCTATCTTATTaaaaccctattagcccc aatttggtacagatgttctccatcatgatacaattttccaggaaaaaaaa aaattggtgacgtcattcaaaaactgatgacgtcatcacaaaatttccac ctgtcggaaaaaaacccaaatatatggtttacaaaaatgtctattacagt cgaaccaataaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNtcgaaccaataaagatatttcgattctgtttgaagattctgaa aggtaaaagactgttctttaacataattgctggttttgcaatttccatga agattttttcttaaaatctatgctgaagatgagtaaatNNNNNttgatga cgtcataaatgatgacgtcatcattttcaaaaattttctttagatttttt aaatttgtattatcaatgcctatcacgtgtcaaaatttgaaaacgattga ataaatagtttagaagttatcagcactttaaaattttgagttttgaggat tttagctgggttttatgtcatgtttcacaataaagtcataaaacctgatc tggacaacttATGATCCTAAACTTttgtacaagtactcttaataagattt tattaaaagtcgaaagtttcaagtcgtttgaaaaatttttctccaagata taaacaaaagaactccagcatGGTAGATTCTAATAGGGTTTAAAGCGTAA AACTTGTGAATTCCCTTATTCAGCTTTCctttcaaaatcaacaaaatata aACAGAATGTTGATAATGTTGATACAAATaggcaaaatcaattttatttc tgatcAACCAACCCATCTCTAAAGTCTAGGGTCAGATAACAACAAGTTTT AAGTTCAGCCTAAGCTTGTACCTGCAAACTCCTTTGAGTTTTGTAAACAT TGGAACCCAACAAGTGATTTTACtttattcttctttttgttACAGGAAAT GTCCTGATATTCTTATTGGACCACTGATCAGTTACGTGCTGAACAAGTTT CAAGATACTGATTTGACACAGTTTAAACTTGAGAGAAAAGATGATGAATC CACAGGTATGTTTTAAGCAGAAATATTTATAATATCATGACTTTTCATTA cattttagtttgatttttatttctaGTGGCCCTTCGTGGATGCAATTCTT CAGCTgcctaaaagcttttgaattttttttggagcATGCCATAGCGTCAA CCCCcctgacttttttttttgggggggggggttacacccaaaaaaatgca aattaaAACTGGGAGCTAAAATACAGCCAAATATTTAGGGGGACCTGAGG GGgacctgatatgtttggggggGCCTGGAATTTCAATGGCAAAGCTGGGG GCTGACTATTCCTTCTactatttttctttatatcacCACATTTTCGTGCT CGATTCACtcgttttattttcaaagacatttttaCTTATCATAGCgggcg ccaaaatcaaaatcttctaaaattgcctACCCATTTTGCCTgaattttag tcgacccaccacgctactgcacATTTCAAGAATGGCAAAAGAATAGAGAT GTGATTTTCCTAAAAacgatatttttttttttttttttttttaNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGGTTTGGA GTATGCGTAGCAaacgaaattgaaagccaacgaACTATGGTCACTTTTTC CTAGTGGTCTTAGGTAGTCGAGATTCCTAATTTGGTTTTCTTCGCTTGTT AAGATCAAGTCGATGAGGGATGGGTCATCAGTTCCTCTACATCGAGTTGG TTCATTAACATGTTGATGGAGATAATATGCGTCTCTCAAAGCATTTAAGA ATTTCTCTTCTTTGCTATCCTTCAGATGCGGGGTGGTCCAGTTTTCCCAA TTGATTGTTGGAAAGTTGAAATCACCTAACAAACATTTGTGCGAATATCT CTTGTTTAATGCAATGGACTTGATCAATAAGTTtaggttgttgttgtttt cgttAGAGGACGTAGATCTAGTTGGGCTTCGATAAATGCATGCAACAGCG AGCAAATATTTTCCTGATAGTTGTACTTCAATCATGCAAACTTCATTGAA AGTCACTGGAGGCTGCTTGACATCGATTACCAAGTGTTTAATGGAGATAT GGACAAATATGACAATGCCACGCCCTTGATCTGTATCTAGGTTAACTTGG CTAGCAATTTTGTAATTGTAGTCATCGAATATAGGACTGGGGActgttta aaaaacttttaatatttGGGGGACCtatttttttgcctgggacctagacC TGGGCTGACCCTACGTGCCACTTAAAAcatatgttattattattattaat tttgattctcatcttattctttttctttagaatACAATGCATCAAGTCTT TCAAAACNTTCTTGttattattaattttgattctcatcttattctttttc tttagaatACAATGCATCAAGTCTTTCAAAACATCTTTATCAAGTTTTTC TTAAGTCGTGTTTGGACTTCATATCCAATTTCGATTCAATGACTATACAA AAGAATCCACAGAGCTTTCATGTCAGTCTACAAGCTGTACGTAACCGAAG GCGGAGAATGGAGGATCGTCATGTTTATTATACTGATTTGAATTCACTTC TTAACTTGGATGAGGTTTGTTCTGCCATACTTGATAGATAACCTTTCACA GGCCTGGCCCTGAACAATACCTTGCGCGTGCCAAAATAGCACTCCATAAA AAATATGTCATGGATGATGAGAAACCACGAAATTTTCTGTTAAGCCAACC TTAATTTCAGATTGACCCTTTTTACATAGTGAGGAAGGTCCAATCTGCAT GAAAGAGGGTCATTCTCAAAACGTATggtcaaccaaatagaaaaatctTT AGTTTTCTTGGACACTTATTTTGAAATTGGCCTCTTTCATTTGTCAACAA CGACTGTAtacccccccccaaaaaaaaacttatatttttttgtgttaTAA TCATTTACAACgtgtttattatttttctacTAGGCCCAGACTGGTCAAGC CCTATTTGCTGTATTTGACGGTCACGGTGGCATAGACGCAGCCAATTATG CAGCCTCTCATTTACTGACACATTTGAAAGCTTGTCCAAATCTAATAACG CAGCCTGGTGAAGCTCTTCACAAAGCTATCTTGAAAACCGACGAGGAGTT TATAAAAAAAGGCAAACGTGAGGTAAACAAtttataccgtaacttggtct aatgtcgacatccctcatctaattccgacaccctttttatcagctgaaat tgatagaaaggtcaaaactgtttttctttgcttagtggtcagagaggaat aatcctttttgtatctaaagaagggtgtcggaattagaagagggatgtcg acattagaccaacttacagtgcAGCAGTTAATACAAATACTCTCAGGTTT CTAATAGAGGGTCTTGAATAAGCAAGGGGCGGGatgcaaatttttgcaaa aaatgatTGCCAGAGAATTACTAAAATGTAAATTTACACAGCTAGTTAGT CACCTGAGGGTTGattcaaaaagaataaaaattgcTAAACTTTTTAATGG GATAACTTTTTGCTGATTTCACGGAATGTGTgtattcaaaaaattgaatt ctaatggaaatttgaaaatgtattTAGACTTATTAGAGTCACTTATAATC TGTGTAATAACAGGTAATAAAGGTGTTATATAATAATTGTCTGTATGTAT TTCACTTTTTGCAGAAATTAAGAAGTGGAGCGACGGCCGTGGTGGTACTT ATCCAAGGATTGAACTTAACCGTTGCATGGCTTGGTGATTCACAGGTTGT GTTGTGTAAAGCAGGTGATGCTGTACAATTAATGGATCCTCATAAACCCA ATAGACCTGTAAGTATCCCAGCTTCTTAATCTGATATCATGTGGTACAAA TCAATTAGTATTCATGTAATAAAATCTACTGATAaatttttaaagctgtt ttctTCAATTTGTTAGCTTTTGTATTTCTTGAAGCTGTTAACTGCTGTTC GACACTACAATATTATGGTATAATTGTTAGGTATATCAATCTGAATTGTC TAAATCAATATTAATTTGACATTTAGGACGAGCGTGCCCGAATCGAATCA CTAGGTGGATGTGTTGTAAACTTCGGCGGATGGCGTGTCAATGGTATTTT AGCCGTGGCACGATCAATCGGTGATTCTGAACAGAAACCGTACGTCACTG GTGAACCGGATGTCGAAGAATACGAAATGGAAGGTCTGTATAACTAACTT GCaactttcaaaagaaatatttcatgtTGACAAAAAGGTTGATAAAAGCA TAGGCTAATAAACAACGTCAGTAACATTTTTATGGCAGCCCATCGTCACT GCTACTGAAAATtgcatgttggatgaaattttctttctccTGAATAGATC GCTAGCGATTAACACAATAAGGTTAAAAGCTTTGAAAAGggatgaagatt tttcaaggaaattGATTATATTTTCCCAATTTACCTCTTAGGTGACGAGG AATTTGTAATCTTAGCGTGCGATGGATTGTGGGATACAGTGGAACCTTTC GACGCTGTACAATTAGTACGGAAATGTATGGAAGAAGGAACTCGAGATTC GGCTGCCGGCAAATTAGTTGATTTGGCTATCAAGCAACGATCAATGGaca atatttcgattttggtagtttattttgattttaatggaCCTGTTGTTTTC TCAGCGGATAATACAACGAATTCTGAAGAAATGTCAGAAGCAAATAATGA AGACGAAAAAGGAGACATTAAAGAAAACCatcaaaatgaagatttgaatg TCAAAGGTCAAGTAAGCGACGAGAGAGAAGAGACTCAAGAAAAAGCAAAT GATGAAAAACCGGCTGCTCATACAGAGGGGACTGTGGCGACGGAAGGAAC AATAAGTTCAAAAGAAAACACGTGATTGCTCCCGCTTGTCACGTGATCTG TAAACTGGTTTTATCGTTCGTTTGCTATGAGAGCTCATTGTAGGGGTTTT TGATATCCGAAAGCCTCGTTTTTGTGATTGAGAGAGGCGTCAAAGGTGAA TGCATTTTTTTTACGCCCAATTGTTCAGAAAATGTTGCTTTTTGACAAGT TTGCTCTTTTTGGCGATATGATTTTTTACGTATTTTATATATTGCGGAGA AAAGTATGAATGGGAATTGTGTAACGCctttataaatgaaaaatttgctg GGAAGAGTGCCTAGATTGCCCTGTCCATAATGCCCATACCCAGCCCTGCC CTAATTTCCGTAGATTTCTTAAATTCGGAGAGCTTAGAATAAAATGTAAT TCTTTGTTGCCCAAAAACTAATACTGTATTTTTCTTGCAATACAAAGATA AATTTATGTATAATAAAATGTATGTATActcacaaaaaaatatatttata tcATTCCTAAAACTCTTTATACGTNATGTATACTcaccaaaaaatatatt tataacaTTCCTAAAACTCTTTATACCATTTTAGTTCATTTTATACTACT TTCTTTCTTATATTGCgtatttatcattattttttctcaATATTGAAGAA GGGTTATCTTAGCACAACTTTTGTTCTTTGTTTAGCGGAGTGTTTTCCAG AAAACTAAGCCTTAGAAACCTTATTTTAGAGGTAGATTTAGCTTTGTGAT AATAAGTTGTTgtcaactacacgttttttaaaagaacatccaaaattttc gaagccatcttaactttttgagttttaagcctaaaaatgttcttaacatg tttttattttcctaatGTTATGACTATTTTTGTCCACTTTCTCAAGAATT TCGGTGCTTTTGAGTCctcaagccttaaaatgttcttaacttgtttttaa cattttggccctatgttcttatatagtttgctcttataaaagaaaaacgt gtagtagACTTGAATATGTGAAACCACCGATCCTAGAAACTAAACTCACT AAGTATAACTGCATAGTATATTatcatcaatttttgttttgtttattgcg TATATATTATATTgcgtatatatatatattattatACTCGTTATTGTTAT AAGACTTTTGTACGATAGTTtacttaaaaaatataatttgtattcCTACC TATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043214XLOC_043214Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069340-exon-scaffold_498-1491911889:489543..490018TCONS_00069340-exon-scaffold_498-1491911889:489543..490018Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:489543..490018TCONS_00069340-exon-scaffold_498-1510915933:489543..490018Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:489543..490018TCONS_00069340-exon-scaffold_498-1575043694:489543..490018Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:499738..499847TCONS_00069340-exon-scaffold_498-1491911889:499738..499847Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:499738..499847TCONS_00069340-exon-scaffold_498-1510915933:499738..499847Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:499738..499847TCONS_00069340-exon-scaffold_498-1575043694:499738..499847Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:502948..503156TCONS_00069340-exon-scaffold_498-1491911889:502948..503156Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:502948..503156TCONS_00069340-exon-scaffold_498-1510915933:502948..503156Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:502948..503156TCONS_00069340-exon-scaffold_498-1575043694:502948..503156Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:503526..503714TCONS_00069340-exon-scaffold_498-1491911889:503526..503714Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:503526..503714TCONS_00069340-exon-scaffold_498-1510915933:503526..503714Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:503526..503714TCONS_00069340-exon-scaffold_498-1575043694:503526..503714Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:504257..504400TCONS_00069340-exon-scaffold_498-1491911889:504257..504400Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:504257..504400TCONS_00069340-exon-scaffold_498-1510915933:504257..504400Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:504257..504400TCONS_00069340-exon-scaffold_498-1575043694:504257..504400Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:504619..504775TCONS_00069340-exon-scaffold_498-1491911889:504619..504775Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:504619..504775TCONS_00069340-exon-scaffold_498-1510915933:504619..504775Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:504619..504775TCONS_00069340-exon-scaffold_498-1575043694:504619..504775Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:505034..505944TCONS_00069340-exon-scaffold_498-1491911889:505034..505944Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:505034..505944TCONS_00069340-exon-scaffold_498-1510915933:505034..505944Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:505034..505944TCONS_00069340-exon-scaffold_498-1575043694:505034..505944Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1491911889:505999..506648TCONS_00069340-exon-scaffold_498-1491911889:505999..506648Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1510915933:505999..506648TCONS_00069340-exon-scaffold_498-1510915933:505999..506648Clytia hemisphaericaexon
TCONS_00069340-exon-scaffold_498-1575043694:505999..506648TCONS_00069340-exon-scaffold_498-1575043694:505999..506648Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:489543..506648 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.58247 2.94215 1.00809 0.784465 4.77338 3.53588 4.23887 3.97445 3.88758 4.79637 5.21923 4.00385 6.57917 5.18238 2.94801 2.99488 10.4312 9.52267 5.92656 7.26203 10.65 11.9594 6.04584 6.06056 6.82614 6.80675 3.37141 2.62913 3.84939 4.66125
Blast
BLAST of TCONS_00069340 vs. Swiss-Prot (Human)
Match: PPM1E (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.332e-82
Identity = 166/394 (42.13%), Postives = 239/394 (60.66%), Query Frame = 1
Query:  415 VIDEEIPGELTDIINRFLHYRKCPDILIGPLISYVLNKFQDTDLTQFKLERKDDES---TEYNASSLSKHLYQVFLKSCLDFISNFDSMTIQKNPQSFH-VSLQAVRNRRRRMEDRHVYYTDLNSLLNLDEAQTGQALFAVFDGHGGIDAANYAASHLLTHLKACPNLITQPGEALHKAILKTDEEFIKKGKREKLRSGATAVVVLIQGLNLTVAWLGDSQVVLCKAGDAVQLMDPHKPNRPDERARIESLGGCVVNFGGWRVNGILAVARSIGDSEQKPYVTXXXXXXXXXXXXXXXFVILACDGLWDTVEPFDAVQLVRKCMEEGTRDSA--AGKLVDLAIKQRSMDNISILVVYF-DFNGPVVFSADNTTNSEEMSEANNEDEKGDIKENH 1575
            +  EE+ GE  D+  + L+   CP  L   L     ++   +DL+   + ++ D +    E     L++ ++    + C  ++ +F    +++ PQ ++  S+ A++N RR+MED+HV   D N L NL E Q  QA FAVFDGHGG+DAA YA+ HL  +L         P EAL +A   TDE F++K  RE LR G T VV  I+G  L VAW+GDSQV+L + G AV+LM PHKP+R DE+ RIE+LGGCVV FG WRVNG L+V+R+IGD+E KPY+ G+ D     ++G E+++ILACDG +DTV P +AV++V   ++E   DS+  A KLV  A    S DNI+++VV+  D N  V  S +  ++  E S    +++ GD KENH
Sbjct:  144 ITREEVEGESLDLCLQQLYKYNCPSFLAAALARATSDEVLQSDLSAHYIPKETDGTEGTVEIETVKLARSVFSKLHEICCSWVKDF---PLRRRPQLYYETSIHAIKNMRRKMEDKHVCIPDFNMLFNL-EDQEEQAYFAVFDGHGGVDAAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNKAVNVSEE--SDWTENSFQGGQEDGGDDKENH 531          
The following BLAST results are available for this feature:
BLAST of TCONS_00069340 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPM1E3.332e-8242.13Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
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