|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069337 ID=TCONS_00069337|Name=TCONS_00069337|organism=Clytia hemisphaerica|type=transcript|length=883bp
tttaggTATAATATCATCTTCAAAGAATATTTACAGAACATTTTTGCTTA
AGAATAATTTACAGAAAATACAAAGACAATAATACTATTTATTTTGTTAC
CTCAGTTGGATCAGcataagtttcaaaataaattggGATTTCGTTATAAA
TTGCTTCATCATCACATTGATCCGTTTCGGGTTTCATTTTATCACAATCG
GTAATCGGAGAGCTGTTCAATTCTTCAGAAACGCTAGCAAGAGTATTGCT
ACTTTCGGCGCGTGGTATTGGCGGAATGGACTCACTTGAAGGGCGCCTCA
TTGTGCTTGGGCGGTACATTTCCGAAAAATCGGGAATAGGCATCCGACCC
TCTGAAAGTCTAGGGAatgtcatgtttttattttccgatCCTGGAATAGG
CGGAAGCGATTCAGCCGACGGTCTTCTCATAGTTCCGCGTCCATATTTCG
GTATACCAAAATCGGGGATACCCGTGATAGTGCGTCCTTCTGATAATCGG
GGAAACGTTCCATTTTTATAATCCGATCCGAGTTGCGATAAAATGGATTC
AGAGGAGGGTCGTCGAACAGTTGAGCGATATCTTTCACCAAAATTTGAGG
TCTGTGTGTTAACGCTGTCTTCGGATGGTCGTCTAATAGTTGAGCGATAT
CGTTCACCAAAATTTGAGGTCTGTGTGATAACACTATCCTCGGAAGGTCT
TCTGAGTGTCCCGCCTGACTCTGAATTGAAATCTGGTATTGGAGGATTTT
TTCGTGATTCATTGGGTCGTCTTAACGTTTGGAGATCAGCATATTGTTCT
GGTTCAACGCTGTTTAAATCCAACTCCATATATAATTCTTCGTTTTGTAT
GACCGGTACTGTAGACTTGACTGATGAAATAAC Run BLAST on NCBI transcript from alignment at scaffold_498:329858..331019+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069337 ID=TCONS_00069337|Name=TCONS_00069337|organism=Clytia hemisphaerica|type=transcript|length=1162bp|location=Sequence derived from alignment at scaffold_498:329858..331019+ (Clytia hemisphaerica)
tttaggTATAATATCATCTTCAAAGAATATTTACAGAACATTTTTGCTTA
AGAATAATTTACAGAAAATACAAAGACAATAATACTATTTATTTTGTTAC
CTCAGTTGGATCAGcataagtttcaaaataaattggGATTTCGTTATAAA
TTGCTTCATCATCACATTGATCTGTTTCGGGTTTCATTTTATCACAATCG
GTAATCGGAGAGCTGTTCAATTCTTCAGAAACGCTAGCAAGAGTATTGCT
ACTTTCGGCGCGTGGTATTGGCGGAATGGACTCACTTGAAGGGCGCCTCA
TTGTGCTTGGGCGGTACATTTCCGAAAAATCGGGAATAGGCATCCGACCC
TCTGAAAGTCTAGGGAatgtcatgtttttattttccgatCCTGGAATAGG
CGGAAGCGATTCAGCCGACGGTCTTCTCATNGCTTCATCATCACATTGAT
CCGTTTCGGGTTTCATTTTATCACAATCGGTAATCGGAGAGCTGTTCAAT
TCTTCAGAAACGCTAGCAAGAGTATTGCTACTTTCGGCGCGTGGTATTGG
CGGAATGGACTCACTTGAAGGGCGCCTCATTGTGCTTGGGCGGTACATTT
CCGAAAAATCGGGAATAGGCATCCGACCCTCTGAAAGTCTAGGGAatgtc
atgtttttattttccgatCCTGGAATAGGCGGAAGCGATTCAGCCGACGG
TCTTCTCATAGTTCCGCGTCCATATTTCGGTATACCAAAATCGGGGATAC
CCGTGATAGTGCGTCCTTCTGATAATCGGGGAAACGTTCCATTTTTATAA
TCCGATCCGAGTTGCGATAAAATGGATTCAGAGGAGGGTCGTCGAACAGT
TGAGCGATATCTTTCACCAAAATTTGAGGTCTGTGTGTTAACGCTGTCTT
CGGATGGTCGTCTAATAGTTGAGCGATATCGTTCACCAAAATTTGAGGTC
TGTGTGATAACACTATCCTCGGAAGGTCTTCTGAGTGTCCCGCCTGACTC
TGAATTGAAATCTGGTATTGGAGGATTTTTTCGTGATTCATTGGGTCGTC
TTAACGTTTGGAGATCAGCATATTGTTCTGGTTCAACGCTGTTTAAATCC
AACTCCATATATAATTCTTCGTTTTGTATGACCGGTACTGTAGACTTGAC
TGATGAAATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069337-exon-scaffold_498-1491911889:329858..330022 | TCONS_00069337-exon-scaffold_498-1491911889:329858..330022 | Clytia hemisphaerica | exon |
| TCONS_00069337-exon-scaffold_498-1510915933:329858..330022 | TCONS_00069337-exon-scaffold_498-1510915933:329858..330022 | Clytia hemisphaerica | exon |
| TCONS_00069337-exon-scaffold_498-1575043694:329858..330022 | TCONS_00069337-exon-scaffold_498-1575043694:329858..330022 | Clytia hemisphaerica | exon |
| TCONS_00069337-exon-scaffold_498-1491911889:330302..331019 | TCONS_00069337-exon-scaffold_498-1491911889:330302..331019 | Clytia hemisphaerica | exon |
| TCONS_00069337-exon-scaffold_498-1510915933:330302..331019 | TCONS_00069337-exon-scaffold_498-1510915933:330302..331019 | Clytia hemisphaerica | exon |
| TCONS_00069337-exon-scaffold_498-1575043694:330302..331019 | TCONS_00069337-exon-scaffold_498-1575043694:330302..331019 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_498 | supercontig | scaffold_498:329858..331019 + |
Blast
The following BLAST results are available for this feature:
|
