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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069325 ID=TCONS_00069325|Name=TCONS_00069325|organism=Clytia hemisphaerica|type=transcript|length=1500bp
tttctcatactTACTTCACTTTATCTTGTTGTGCcctttcttattttcat
cactttgaaaaaataattcctACCTACTATGTacaatttataatattttt
ataaaatagaaaatttgaaaaatcggattcattagaaaaaactaaacata
aaaaaaatcaagaactgAACCTTATTTCGTGTATCTTGTTCACTTTGAAC
GGGCAGTGGGAGTGAGAGCGATGGTAGCGAATGAATTTCTTCGTCTTTCT
TATTTTATTGGTTAACACTACAAACCCTGTCAGTTTATGTGGATAAATTG
AGACTGTGATGGTGGTGGCTCGCATTGATATTTACATATTAAGAATTTAA
AACTATCGAAAACAGTTTGTTACTTAAGTTGAGAAAATACTCCTAAAAGT
TTAAATTGTTCATGGCATGATATACTCAGAAGTAAAAATTATTATCTCCA
CCACATCTCCAAGTGAATACGAAATCGAATTCGTACATATTTTCTAATTC
TCATTGATCACCCAAAAGCTCCATAAAACGGTAACAATAAATGTTCAAAT
AACATTCATCTTAAGGTCCATATAGCAAACGCATGTTTGTATCAAAAGGT
CTATGCTCAAAATATCACTTCATCACACAGATTCCAAAGTTATTCGTGAT
ACTTGCTAAAGTCTAGGTCAGATATCATTTTTGAATATCCAGTACGATAA
AAAACTTCTTGGTGTGAACCTCAGTAAGTTGGCAAGTATACTAAAATGAC
ATCAAACCAGTATACTAAAATGACGGTTAATCTTTTCTCCGCTGTCCCtt
cttactcttaggtgccaaataaacggggggttcgaataaacaggggggtt
ggaaaatttttgaaatttcaataaacgggggggacctaattgccgggggg
gttggaaattgtacttatgaaaacccaaaaataaggtaaatataggctaa
aatcaggctttttggagcaaaataaggggatttcttttagccaactgaaa
atattctttaaaattaataaacgggggggtcctaataaggtccggggggg
ttggaaaattttcgaaaaattaacaagcgggggggaccgtttatttggca
cctaagagtatagACGTAAAGCCATCTTAACTTGTCACCACCGTCTCCGT
GTTTCCAACATAACGTAGTCTTCATCATCGTGGAATCAATAACGTTCTCA
CACGAGAAAAGATTGTAGGAATTCTTCGCCCGTCACAATGGCCGTCGTTA
GAATAATGAAACGATATCCTGTGAAGAATAATGGTTGTTGTGTTTAAAAA
TATATGATAAAAGATACTATTTATTATCTAaatcgaggggtaaatcactc
gaaaaagtagaaaaatggTGTACAAGAtttgtgatttatttttgatttat
ttcttatttataagattgtgtacgagatttattttagtgatttgcccctc
gatCTAAATCTTAACCGAAAACGTTCATAAATGctgcatgttttttttat Run BLAST on NCBI transcript from alignment at scaffold_497:125404..126903 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069325 ID=TCONS_00069325|Name=TCONS_00069325|organism=Clytia hemisphaerica|type=transcript|length=1500bp|location=Sequence derived from alignment at scaffold_497:125404..126903 (Clytia hemisphaerica)
ataaaaaaaacatgcagCATTTATGAACGTTTTCGGTTAAGATTTAGatc
gaggggcaaatcactaaaataaatctcgtacacaatcttataaataagaa
ataaatcaaaaataaatcacaaaTCTTGTACAccatttttctactttttc
gagtgatttacccctcgattTAGATAATAAATAGTATCTTTTATCATATA
TTTTTAAACACAACAACCATTATTCTTCACAGGATATCGTTTCATTATTC
TAACGACGGCCATTGTGACGGGCGAAGAATTCCTACAATCTTTTCTCGTG
TGAGAACGTTATTGATTCCACGATGATGAAGACTACGTTATGTTGGAAAC
ACGGAGACGGTGGTGACAAGTTAAGATGGCTTTACGTctatactcttagg
tgccaaataaacggtcccccccgcttgttaatttttcgaaaattttccaa
cccccccggaccttattaggacccccccgtttattaattttaaagaatat
tttcagttggctaaaagaaatccccttattttgctccaaaaagcctgatt
ttagcctatatttaccttatttttgggttttcataagtacaatttccaac
ccccccggcaattaggtcccccccgtttattgaaatttcaaaaattttcc
aacccccctgtttattcgaaccccccgtttatttggcacctaagagtaag
aaGGGACAGCGGAGAAAAGATTAACCGTCATTTTAGTATACTGGTTTGAT
GTCATTTTAGTATACTTGCCAACTTACTGAGGTTCACACCAAGAAGTTTT
TTATCGTACTGGATATTCAAAAATGATATCTGACCTAGACTTTAGCAAGT
ATCACGAATAACTTTGGAATCTGTGTGATGAAGTGATATTTTGAGCATAG
ACCTTTTGATACAAACATGCGTTTGCTATATGGACCTTAAGATGAATGTT
ATTTGAACATTTATTGTTACCGTTTTATGGAGCTTTTGGGTGATCAATGA
GAATTAGAAAATATGTACGAATTCGATTTCGTATTCACTTGGAGATGTGG
TGGAGATAATAATTTTTACTTCTGAGTATATCATGCCATGAACAATTTAA
ACTTTTAGGAGTATTTTCTCAACTTAAGTAACAAACTGTTTTCGATAGTT
TTAAATTCTTAATATGTAAATATCAATGCGAGCCACCACCATCACAGTCT
CAATTTATCCACATAAACTGACAGGGTTTGTAGTGTTAACCAATAAAATA
AGAAAGACGAAGAAATTCATTCGCTACCATCGCTCTCACTCCCACTGCCC
GTTCAAAGTGAACAAGATACACGAAATAAGGTTcagttcttgattttttt
tatgtttagttttttctaatgaatccgatttttcaaattttctattttat
aaaaatattataaattgtACATAGTAGGTaggaattattttttcaaagtg
atgaaaataagaaaggGCACAACAAGATAAAGTGAAGTAagtatgagaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069325-exon-scaffold_497-1491911889:125404..126903 | TCONS_00069325-exon-scaffold_497-1491911889:125404..126903 | Clytia hemisphaerica | exon |
| TCONS_00069325-exon-scaffold_497-1510915933:125404..126903 | TCONS_00069325-exon-scaffold_497-1510915933:125404..126903 | Clytia hemisphaerica | exon |
| TCONS_00069325-exon-scaffold_497-1575043694:125404..126903 | TCONS_00069325-exon-scaffold_497-1575043694:125404..126903 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_497 | supercontig | scaffold_497:125404..126903 . |
Blast
The following BLAST results are available for this feature:
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