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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069320 ID=TCONS_00069320|Name=TCONS_00069320|organism=Clytia hemisphaerica|type=transcript|length=383bp
AAGGGTTGACCAAAATATTGAATTTTATTTTTAAGAAATTTCCGTCGTAA
AAAAACCGAAATCATTTATTGTCAAGTCCAAATGAGTAATAATTTTTTAC
TTTATTCTTTAGAAAAGAAATCTGTTTCCAAAATCACGAAAGAAGTTTAG
CTTGATCCCAAAATCACCAGAAGCAGCAAGCAAGGGTCCAGTACCAAAAG
ATTTATCCTATGTTTTTGGTGGTGCATATACACCCTTCCTCGTCAAAATT
GTTGAACAGTTGCTGACCAAACCATACGTCGGAGGTGTGGAAGAAATGTT
GAAAACGTTACAAATTCCCGCCACGGAATACAAAGCTGGTTCCTCTGCTA
GGCGTAAGATtgatctttgaaatattttttctg Run BLAST on NCBI transcript from alignment at scaffold_497:121755..123541+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069320 ID=TCONS_00069320|Name=TCONS_00069320|organism=Clytia hemisphaerica|type=transcript|length=1787bp|location=Sequence derived from alignment at scaffold_497:121755..123541+ (Clytia hemisphaerica)
AAGGGTTGACCAAAATATTGAATTTTATTTTTAAGAAATTTCCGTCGTAA
AAAAACCGAAATCATTTATTGTCAAGTCCAAATGAGTAATAATTTTTTAC
TTTATTCTTTAGAAAAGAAATCTGTTTCCAAAATCACGAAAGAAGTTTAG
CTTGGTGAGTATTGCTAATTAATCTCTCGAATTTGAAAAATTGCACAAGA
TTTACTGATTTTTTCATTGTTGGCAACCGCCAAAATTTAACCTTGGGAGA
AATCTTTCCGTCGTTTTTCCATGACAACACCTTCTATAAGTTTTACGAAA
GTTTCTTACAAAGTTTTTAAGTTGTTGAAAAAAGTTTGATTTTTTTTTCA
TATCTGACAGATCCCAAAATCACCAGAAGCAGCAAGCAAGGGTCCAGTAC
CAAAAGATTTATCCTATGTTTTTGGTGGTGCATATACACCCTTCCTCGTC
AAAATTGTTGAACAGGTTACTTTTCACACACAATATTCAAAGATTTATAT
TGTTATGCGCGTTCGAGATTCAAGTTgcaatttacaaaaatataaaaagg
tgTTTTGGTTTCCCAGGGGGGGCTATTAGAAATAGAAGTAATAATTGAAA
CATACCATCCCATCGTGAAAAGTTTTAACATCCTTGAAAATTGCCCTCTT
TAATTTTGATCGACACTGAGCTAAAATCATACAAAATGCCAAAGAAAAGA
GTACTTTTATCAAGAACTTCTTTGATCAATCCTGAACATAAAATATTGAC
AAAGGTGTTATCGTCTTTGTCTCATACTTAGCATAAGATTATGATCTTTT
TAAGTTTATGACTACATTATTCTATGGTTTACATTCCAGGGCGTGTATCA
TTTTGGTAGAAAAGTCTGGGTTTTTTATGTTTGAGAAAGTGAAATCTAGG
GTGGGCTTCCTAATAATGACCTTATTTCCTGGAATATCATTATCAAATAC
TCCATGTTGGAAAATCACTTCCCAAACTTCAGATAATGCAAGATTCTTAA
ACTCATTGGAATCCAGTAATATTGTGTTAAATTACAGCGGTTTCTTTTCG
ACAAGCCCAGTGATcgatatcaatttttttctactAGTCCCGAGGTGTAT
GGAGGGGGGGTGGGCACTaaaggtaaacgacctaccgtatGTGCGACCCT
TAGGGgtcttttttccaagcttttaaagtgcactgtaagggtcgaaatga
gcaaagatgagaaagagTACACTATtttgctactacaatacaatattttg
ccttaaaatggtcaaagaatttcaagaaaatgaactgtaagggtctgatt
tCAAAAACCTAATTTTGGGCCACACGTACCGTCATTTTTTAATAGAGTAT
AATACTACCAGTGCGTTGTTGAAGTCGTTAAAGCCACCAAGACGATCACA
CCTTGTGGATCAACACTAAAAAActgtagatgttttttttgataaaaaaa
tccaaaattttttaaaccttgggattatttttaccttttttgagcatttt
tgtcaatttccctatgaaattcggtgttctagagtcctcaaagcctttga
atgttcttaacttgtttttaacattttggccatcgaagccttatgttcta
atatagtttgttcttataaaaagctgTATATAACgcgtttcttttatgtt
tcgTTTTATGTAGTTGCTGACCAAACCATACGTCGGAGGTGTGGAAGAAA
TGTTGAAAACGTTACAAATTCCCGCCACGGAATACAAAGCTGGTTCCTCT
GCTAGGCGTAAGATtgatctttgaaatattttttctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069320-exon-scaffold_497-1491911889:121755..121908 | TCONS_00069320-exon-scaffold_497-1491911889:121755..121908 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1510915933:121755..121908 | TCONS_00069320-exon-scaffold_497-1510915933:121755..121908 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1575043694:121755..121908 | TCONS_00069320-exon-scaffold_497-1575043694:121755..121908 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1491911889:122115..122219 | TCONS_00069320-exon-scaffold_497-1491911889:122115..122219 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1510915933:122115..122219 | TCONS_00069320-exon-scaffold_497-1510915933:122115..122219 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1575043694:122115..122219 | TCONS_00069320-exon-scaffold_497-1575043694:122115..122219 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1491911889:123418..123541 | TCONS_00069320-exon-scaffold_497-1491911889:123418..123541 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1510915933:123418..123541 | TCONS_00069320-exon-scaffold_497-1510915933:123418..123541 | Clytia hemisphaerica | exon |
| TCONS_00069320-exon-scaffold_497-1575043694:123418..123541 | TCONS_00069320-exon-scaffold_497-1575043694:123418..123541 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_497 | supercontig | scaffold_497:121755..123541 + |
Blast
The following BLAST results are available for this feature:
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