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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069299 ID=TCONS_00069299|Name=TCONS_00069299|organism=Clytia hemisphaerica|type=transcript|length=1020bp
gtgaaaataagaacatgttaaagaacaattttaggcttaaaactcaaaaa
gttaaaacatcctaaggcttcaaaaatgttggatgttcttataaaaaaaa
cttgtagcCTAAATCAGAATATGATCTACATACCAAATGAAATAAAGGAA
ATTGTATTGTATTTGAGTTGTTATAAATCTGCAAGAAAATTTATCTTTTA
CTCTAATTTCATCCCTGACCAAATACATGCCATATATTGTCACAATTCAT
TGGTTAAAACAAAACCACCATATCTCACATATCAATCAACACCTTTTAAC
TGTCATAAGCTTATCGGGaaggtaaatttttgttgtACCGAGAAAGTTTA
TGTATATCGAGGGAAAACCTTTCACGTCtaaatttgacttttttcgTAGT
TTTCGCAGTGACAGATTTGATAAATGATCTGTTATACTGATTGTACTGTT
GTGGTTAGAAATAACAGGTTTCTCAGTGGGATGTCTTAGATCTTATCTTT
CCAACCAAtttatcaattcttttgttatGAACCTGATACTCTGTACTGCA
TGTATATTGGTATAAATGTTTCATTGTCTGTTGGTGTATAATTAATTTGT
TACATACTACATAATAGACGCATGTATCTTTTCGATTGAGTTTGTTTCTC
TTGTACGAGACTTTTTGTTATTCTAAGGCATTCTTTCTGATTGCCTGTAC
TTTGATTTCTCTGCTGTTGAAATGATTGAAATAAAGTGATTAAACCCATT
TCTTAAAAATGGATGACAAAATGCCAGGTTTCTCATGTATcacttcccag
ctggcacacaacgttgtttcgatgttcatctaacattatatggacgtcgt
gaacgttagataaacgttaaatggacgttgtgtgTCATATAAACTTTAAA
agaatgttgtgtgccagctgggtttgaCACAAACGACAAGTTTTCATCAA
GTTACATTCATAAAGTCAAATTTTTACCAATAAAAACGGTTATAAATTAT
CAGTGAACTTTTAGGatttg Run BLAST on NCBI protein sequence of TCONS_00069299-protein >TCONS_00069299-protein ID=TCONS_00069299-protein|Name=TCONS_00069299-protein|organism=Clytia hemisphaerica|type=polypeptide|length=101bp
MLDVLIKKTCSLNQNMIYIPNEIKEIVLYLSCYKSARKFIFYSNFIPDQI
HAIYCHNSLVKTKPPYLTYQSTPFNCHKLIGKVNFCCTEKVYVYRGKTFH
V Run BLAST on NCBI transcript from alignment at scaffold_496:392414..393433 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069299 ID=TCONS_00069299|Name=TCONS_00069299|organism=Clytia hemisphaerica|type=transcript|length=1020bp|location=Sequence derived from alignment at scaffold_496:392414..393433 (Clytia hemisphaerica)
caaatCCTAAAAGTTCACTGATAATTTATAACCGTTTTTATTGGTAAAAA
TTTGACTTTATGAATGTAACTTGATGAAAACTTGTCGTTTGTGtcaaacc
cagctggcacacaacattctTTTAAAGTTTATATGAcacacaacgtccat
ttaacgtttatctaacgttcacgacgtccatataatgttagatgaacatc
gaaacaacgttgtgtgccagctgggaagtgATACATGAGAAACCTGGCAT
TTTGTCATCCATTTTTAAGAAATGGGTTTAATCACTTTATTTCAATCATT
TCAACAGCAGAGAAATCAAAGTACAGGCAATCAGAAAGAATGCCTTAGAA
TAACAAAAAGTCTCGTACAAGAGAAACAAACTCAATCGAAAAGATACATG
CGTCTATTATGTAGTATGTAACAAATTAATTATACACCAACAGACAATGA
AACATTTATACCAATATACATGCAGTACAGAGTATCAGGTTCataacaaa
agaattgataaaTTGGTTGGAAAGATAAGATCTAAGACATCCCACTGAGA
AACCTGTTATTTCTAACCACAACAGTACAATCAGTATAACAGATCATTTA
TCAAATCTGTCACTGCGAAAACTAcgaaaaaagtcaaatttaGACGTGAA
AGGTTTTCCCTCGATATACATAAACTTTCTCGGTacaacaaaaatttacc
ttCCCGATAAGCTTATGACAGTTAAAAGGTGTTGATTGATATGTGAGATA
TGGTGGTTTTGTTTTAACCAATGAATTGTGACAATATATGGCATGTATTT
GGTCAGGGATGAAATTAGAGTAAAAGATAAATTTTCTTGCAGATTTATAA
CAACTCAAATACAATACAATTTCCTTTATTTCATTTGGTATGTAGATCAT
ATTCTGATTTAGgctacaagttttttttataagaacatccaacatttttg
aagccttaggatgttttaactttttgagttttaagcctaaaattgttctt
taacatgttcttattttcac Coding sequence (CDS) from alignment at scaffold_496:392414..393433 >TCONS_00069299 ID=TCONS_00069299|Name=TCONS_00069299|organism=Clytia hemisphaerica|type=CDS|length=306bp|location=Sequence derived from alignment at scaffold_496:392414..393433 (Clytia hemisphaerica)
ttaGACGTGAAAGGTTTTCCCTCGATATACATAAACTTTCTCGGTacaac
aaaaatttaccttCCCGATAAGCTTATGACAGTTAAAAGGTGTTGATTGA
TATGTGAGATATGGTGGTTTTGTTTTAACCAATGAATTGTGACAATATAT
GGCATGTATTTGGTCAGGGATGAAATTAGAGTAAAAGATAAATTTTCTTG
CAGATTTATAACAACTCAAATACAATACAATTTCCTTTATTTCATTTGGT
ATGTAGATCATATTCTGATTTAGgctacaagttttttttataagaacatc
caacat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069299-exon-scaffold_496-1491911889:392414..393433 | TCONS_00069299-exon-scaffold_496-1491911889:392414..393433 | Clytia hemisphaerica | exon |
| TCONS_00069299-exon-scaffold_496-1510915933:392414..393433 | TCONS_00069299-exon-scaffold_496-1510915933:392414..393433 | Clytia hemisphaerica | exon |
| TCONS_00069299-exon-scaffold_496-1575043694:392414..393433 | TCONS_00069299-exon-scaffold_496-1575043694:392414..393433 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:392414..393433 . |
Blast
The following BLAST results are available for this feature:
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