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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069284 ID=TCONS_00069284|Name=TCONS_00069284|organism=Clytia hemisphaerica|type=transcript|length=2782bp
TTTTGATGTTCGTATACCGCTTTTTCTAGGCGCTGTATAGGAGTAAAATT
CAGACTTACAGAAGGACTCAAGAGTGAATTTATCCACGAGATACAAGATT
CAATCGAGAAAGGCAAGCTAAACTGGTATAAATAGATCTCTGAAATCATC
TATGTGATTTTACATTCAAAGTGAAACTTAAACCACAAACATTTACAAAC
TACTACATGATCAACTCCAGTCAAAAACATGGAGGAAGGAAGAAAGTTTA
TGTATTATACAATCAGTGAGCCTTTTAACATAATGCTTATGGTCCTTGGG
ATTCTTATGGTGATTTTAAACGTCTTGGAAATTCGATTTATCGTTAAAGg
atcgaaaaataaaaagctCCACAAATCACAAATCTATCTTTCGAATCTTG
CATTGTCTGATGTCATGTTCGGAGTTAGTATTATACTTCTGTTTGCTGTT
TCAGAATATATAAATAAAGTTTCCGATCGTGCAAACTGGTTACGTGCAAT
GTATGTCTATTTACACCTTGTCGGCAcaagaataacttttacaatGTCGA
TTTTTAGTTTATTAGCATTAACTCTGGATAGGCTTCTTGGagttttgaaa
cctttttatcatcgaaaaattgaaaacaagcaCTGTGTTTGCATCTGTGT
TTTGACTTGGGTTGTAGCGATCACAATGGGCTCATTAAATATTGTTTTGA
TGGCTAGAGCGTCGCATTACAGCATTGACATGATTTTTGGAAGAATTATT
GACTCACAAAATACTACAGCAGAAATACAGCATGTCAGGCAAGATATCTA
TGGTTATGCTTATGAATTCAAAATTCTCAGAACAGAAATTGTAAATTTAA
CAAAACCATACCCTGACTGGCTCAACAACGTTTTAGAGAAAATTAATTCT
ACCCATAATAGGTATATAGACAGCCCTTACGGTCTTCGTTCAATGGAACA
AGGAGACTTTGAATATTCAATTATTCAAGTTACAATTTACACCaccgttt
ttattttgttgtcagTTTATACATTGATTTGGTATCGATTGCGGAAAAGT
CATCTATTTATTCGAGGAAGCGCAAAAACCCCAGAAATCGTTGAAAACGt
tcaaaaaacaaaggaaaagaaatttgtcaaattatCAATCgctattgttt
tagcttttgctTTTTGTTGGTTGCCATTGGCAATTCATTCTACCATTTTC
TTTTATTGGGGAAAGTACAAAGGATATGACGTGAGCACAGAGGAGTTATA
TGTAATGATGCCTGTATTATTAAATTCGATAATTAATCCGTTTTTATACT
TCAAAATGATGAGCAAAGTGGGTTTTTgtacaaagtttaaaaatagaaat
atacGATTGAGAGCACCGAGTAACGTTTCGAACACAACTGAGTTCTGAGT
TTCACACGTTCACTACCGACCGTTTTtccgaaattgaaattttgacatct
tggaattttatcaaaatcttGACTTTCAGAGGGTCCTGTGTGCTGATTTC
TGTTTAAAACACCTTCAAATTGTATACCGAGCGaggcaaaattttcagaa
ttttacgTAGATTCCAAAAATTCAGGGAAAAGCATAATCGAACGTTTCTG
TATTTATAAGTTATAGCTCTTTGAAGTACTGTCGGTATTTTGACCCCTAC
TCGTAGTTGGCAGCAAATGTGTTAAAACCAGGTTTACGATATTTACAGTA
AATTGAGCTTTGAATCACTATGAAAAAAATGCTTAGCTTGCAAAAACATG
CGAGTTCAAAcgaattatgaaaacaaaaaatacgtGCGTTTCTACGTTGG
CCCATATATGCAAACATGTTATCCTAAATTACAAACACTATAGACAAACA
CCAACAACTAAAATACAAACGCTTTCACCTGAAAGTTGCAAGCACTAACA
ATGCAAACACTAACGATTAAAATACAAACACTTTCAACTTAAAGTTGCAA
GCACTAAGAATGCAAACACTAAcaactaaaatgcaaacactaTCAACTAA
AATTGCAAACTCTAACAAATAAAATTCAAACAGTAACAACTTAAATGCAA
ACACTAGCAATTTAAATTACGAACACTAACAACTTAAAattgcaaacact
ttcaactaaaattGCAAACACTAACAATGAAGATACAAACACTTTCAACT
GAGTTGCAAGCACTAACAATGCAAACACTAAcaactaaaatgcaaacacC
AACAACTAAAATACAAACGCTTTCACCTGAAAGTTGCAAGCACTAACAAT
GCAAACACTAACAACTAAAATGCAACTCTATCAACTAAAATTGCAAACAT
TAACAACTAAGAACTCAAACACTAACAACTTAAATGCAAACACTAACAAT
GAAGATACAAACACTTTCAACTGAGTTGCAAGCACTAACAATGCAAACAC
TAACAACTAAAATGCGAACACAATATCAACTAAAATTGCAAATACTAACA
ACTAAAATTCAAACACTAAAAACTTAAATGTAAACACTAGCAACTTAAAT
TGCgaacactttcaactaaaattGCAAACACTAACAATGAAGATACAAAC
ACTTTCAACTTAAAGTTGCAAGCACTAAACAATGCAAATACCAACACTTA
AATTGCAAACAGTAAAAACTAAAATTGCTAACACTAACAACTCCAATGTA
AACACTAGCAACTTAAATTACGAACACTTTTAACTAAAATTGTAAATAAT
AACAACTTTATATTACAAACACTAACAACTTTATATTACAAATACTAACA
ACTTTAATTTACAAACACAAttgcaaaataaa Run BLAST on NCBI protein sequence of TCONS_00069284-protein >TCONS_00069284-protein ID=TCONS_00069284-protein|Name=TCONS_00069284-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MEEGRKFMYYTISEPFNIMLMVLGILMVILNVLEIRFIVKGSKNKKLHKS
QIYLSNLALSDVMFGVSIILLFAVSEYINKVSDRANWLRAMYVYLHLVGT
RITFTMSIFSLLALTLDRLLGVLKPFYHRKIENKHCVCICVLTWVVAITM
GSLNIVLMARASHYSIDMIFGRIIDSQNTTAEIQHVRQDIYGYAYEFKIL
RTEIVNLTKPYPDWLNNVLEKINSTHNRYIDSPYGLRSMEQGDFEYSIIQ
VTIYTTVFILLSVYTLIWYRLRKSHLFIRGSAKTPEIVENVQKTKEKKFV
KLSIAIVLAFAFCWLPLAIHSTIFFYWGKYKGYDVSTEELYVMMPVLLNS
IINPFLYFKMMSKVGFCTKFKNRNIRLRAPSNVSNTTEF Run BLAST on NCBI transcript from alignment at scaffold_496:79742..82523 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069284 ID=TCONS_00069284|Name=TCONS_00069284|organism=Clytia hemisphaerica|type=transcript|length=2782bp|location=Sequence derived from alignment at scaffold_496:79742..82523 (Clytia hemisphaerica)
tttattttgcaaTTGTGTTTGTAAATTAAAGTTGTTAGTATTTGTAATAT
AAAGTTGTTAGTGTTTGTAATATAAAGTTGTTATTATTTACAATTTTAGT
TAAAAGTGTTCGTAATTTAAGTTGCTAGTGTTTACATTGGAGTTGTTAGT
GTTAGCAATTTTAGTTTTTACTGTTTGCAATTTAAGTGTTGGTATTTGCA
TTGTTTAGTGCTTGCAACTTTAAGTTGAAAGTGTTTGTATCTTCATTGTT
AGTGTTTGCaattttagttgaaagtgttcGCAATTTAAGTTGCTAGTGTT
TACATTTAAGTTTTTAGTGTTTGAATTTTAGTTGTTAGTATTTGCAATTT
TAGTTGATATTGTGTTCGCATTTTAGTTGTTAGTGTTTGCATTGTTAGTG
CTTGCAACTCAGTTGAAAGTGTTTGTATCTTCATTGTTAGTGTTTGCATT
TAAGTTGTTAGTGTTTGAGTTCTTAGTTGTTAATGTTTGCAATTTTAGTT
GATAGAGTTGCATTTTAGTTGTTAGTGTTTGCATTGTTAGTGCTTGCAAC
TTTCAGGTGAAAGCGTTTGTATTTTAGTTGTTGgtgtttgcattttagtt
gTTAGTGTTTGCATTGTTAGTGCTTGCAACTCAGTTGAAAGTGTTTGTAT
CTTCATTGTTAGTGTTTGCaattttagttgaaagtgtttgcaatTTTAAG
TTGTTAGTGTTCGTAATTTAAATTGCTAGTGTTTGCATTTAAGTTGTTAC
TGTTTGAATTTTATTTGTTAGAGTTTGCAATTTTAGTTGAtagtgtttgc
attttagttgTTAGTGTTTGCATTCTTAGTGCTTGCAACTTTAAGTTGAA
AGTGTTTGTATTTTAATCGTTAGTGTTTGCATTGTTAGTGCTTGCAACTT
TCAGGTGAAAGCGTTTGTATTTTAGTTGTTGGTGTTTGTCTATAGTGTTT
GTAATTTAGGATAACATGTTTGCATATATGGGCCAACGTAGAAACGCacg
tattttttgttttcataattcgTTTGAACTCGCATGTTTTTGCAAGCTAA
GCATTTTTTTCATAGTGATTCAAAGCTCAATTTACTGTAAATATCGTAAA
CCTGGTTTTAACACATTTGCTGCCAACTACGAGTAGGGGTCAAAATACCG
ACAGTACTTCAAAGAGCTATAACTTATAAATACAGAAACGTTCGATTATG
CTTTTCCCTGAATTTTTGGAATCTAcgtaaaattctgaaaattttgcctC
GCTCGGTATACAATTTGAAGGTGTTTTAAACAGAAATCAGCACACAGGAC
CCTCTGAAAGTCaagattttgataaaattccaagatgtcaaaatttcaat
ttcggaAAAACGGTCGGTAGTGAACGTGTGAAACTCAGAACTCAGTTGTG
TTCGAAACGTTACTCGGTGCTCTCAATCgtatatttctatttttaaactt
tgtacAAAAACCCACTTTGCTCATCATTTTGAAGTATAAAAACGGATTAA
TTATCGAATTTAATAATACAGGCATCATTACATATAACTCCTCTGTGCTC
ACGTCATATCCTTTGTACTTTCCCCAATAAAAGAAAATGGTAGAATGAAT
TGCCAATGGCAACCAACAAAAagcaaaagctaaaacaatagcGATTGata
atttgacaaatttcttttcctttgttttttgaaCGTTTTCAACGATTTCT
GGGGTTTTTGCGCTTCCTCGAATAAATAGATGACTTTTCCGCAATCGATA
CCAAATCAATGTATAAActgacaacaaaataaaaacggtGGTGTAAATTG
TAACTTGAATAATTGAATATTCAAAGTCTCCTTGTTCCATTGAACGAAGA
CCGTAAGGGCTGTCTATATACCTATTATGGGTAGAATTAATTTTCTCTAA
AACGTTGTTGAGCCAGTCAGGGTATGGTTTTGTTAAATTTACAATTTCTG
TTCTGAGAATTTTGAATTCATAAGCATAACCATAGATATCTTGCCTGACA
TGCTGTATTTCTGCTGTAGTATTTTGTGAGTCAATAATTCTTCCAAAAAT
CATGTCAATGCTGTAATGCGACGCTCTAGCCATCAAAACAATATTTAATG
AGCCCATTGTGATCGCTACAACCCAAGTCAAAACACAGATGCAAACACAG
tgcttgttttcaatttttcgatgataaaaaggtttcaaaactCCAAGAAG
CCTATCCAGAGTTAATGCTAATAAACTAAAAATCGACattgtaaaagtta
ttcttgTGCCGACAAGGTGTAAATAGACATACATTGCACGTAACCAGTTT
GCACGATCGGAAACTTTATTTATATATTCTGAAACAGCAAACAGAAGTAT
AATACTAACTCCGAACATGACATCAGACAATGCAAGATTCGAAAGATAGA
TTTGTGATTTGTGGagctttttatttttcgatcCTTTAACGATAAATCGA
ATTTCCAAGACGTTTAAAATCACCATAAGAATCCCAAGGACCATAAGCAT
TATGTTAAAAGGCTCACTGATTGTATAATACATAAACTTTCTTCCTTCCT
CCATGTTTTTGACTGGAGTTGATCATGTAGTAGTTTGTAAATGTTTGTGG
TTTAAGTTTCACTTTGAATGTAAAATCACATAGATGATTTCAGAGATCTA
TTTATACCAGTTTAGCTTGCCTTTCTCGATTGAATCTTGTATCTCGTGGA
TAAATTCACTCTTGAGTCCTTCTGTAAGTCTGAATTTTACTCCTATACAG
CGCCTAGAAAAAGCGGTATACGAACATCAAAA Coding sequence (CDS) from alignment at scaffold_496:79742..82523 >TCONS_00069284 ID=TCONS_00069284|Name=TCONS_00069284|organism=Clytia hemisphaerica|type=CDS|length=1170bp|location=Sequence derived from alignment at scaffold_496:79742..82523 (Clytia hemisphaerica)
TCAGAACTCAGTTGTGTTCGAAACGTTACTCGGTGCTCTCAATCgtatat
ttctatttttaaactttgtacAAAAACCCACTTTGCTCATCATTTTGAAG
TATAAAAACGGATTAATTATCGAATTTAATAATACAGGCATCATTACATA
TAACTCCTCTGTGCTCACGTCATATCCTTTGTACTTTCCCCAATAAAAGA
AAATGGTAGAATGAATTGCCAATGGCAACCAACAAAAagcaaaagctaaa
acaatagcGATTGataatttgacaaatttcttttcctttgttttttgaaC
GTTTTCAACGATTTCTGGGGTTTTTGCGCTTCCTCGAATAAATAGATGAC
TTTTCCGCAATCGATACCAAATCAATGTATAAActgacaacaaaataaaa
acggtGGTGTAAATTGTAACTTGAATAATTGAATATTCAAAGTCTCCTTG
TTCCATTGAACGAAGACCGTAAGGGCTGTCTATATACCTATTATGGGTAG
AATTAATTTTCTCTAAAACGTTGTTGAGCCAGTCAGGGTATGGTTTTGTT
AAATTTACAATTTCTGTTCTGAGAATTTTGAATTCATAAGCATAACCATA
GATATCTTGCCTGACATGCTGTATTTCTGCTGTAGTATTTTGTGAGTCAA
TAATTCTTCCAAAAATCATGTCAATGCTGTAATGCGACGCTCTAGCCATC
AAAACAATATTTAATGAGCCCATTGTGATCGCTACAACCCAAGTCAAAAC
ACAGATGCAAACACAGtgcttgttttcaatttttcgatgataaaaaggtt
tcaaaactCCAAGAAGCCTATCCAGAGTTAATGCTAATAAACTAAAAATC
GACattgtaaaagttattcttgTGCCGACAAGGTGTAAATAGACATACAT
TGCACGTAACCAGTTTGCACGATCGGAAACTTTATTTATATATTCTGAAA
CAGCAAACAGAAGTATAATACTAACTCCGAACATGACATCAGACAATGCA
AGATTCGAAAGATAGATTTGTGATTTGTGGagctttttatttttcgatcC
TTTAACGATAAATCGAATTTCCAAGACGTTTAAAATCACCATAAGAATCC
CAAGGACCATAAGCATTATGTTAAAAGGCTCACTGATTGTATAATACATA
AACTTTCTTCCTTCCTCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069284-exon-scaffold_496-1491911889:79742..82523 | TCONS_00069284-exon-scaffold_496-1491911889:79742..82523 | Clytia hemisphaerica | exon |
| TCONS_00069284-exon-scaffold_496-1510915933:79742..82523 | TCONS_00069284-exon-scaffold_496-1510915933:79742..82523 | Clytia hemisphaerica | exon |
| TCONS_00069284-exon-scaffold_496-1575043694:79742..82523 | TCONS_00069284-exon-scaffold_496-1575043694:79742..82523 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:79742..82523 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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