TCONS_00069213 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069213
Unique NameTCONS_00069213
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1567

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069213 ID=TCONS_00069213|Name=TCONS_00069213|organism=Clytia hemisphaerica|type=transcript|length=1567bp
TATTTTACTTTTAGACCTGATGATGGATAATAATCCCAAATatattgtca
aaaataaaataacaaaatagtTGGTACCAATCTTATGAAAATCTTTGATG
GAGCCTACCATTCATGCCAAGTCACCCCTTGCAAGCCCTGACCCATTCAA
AGTGTACACAAAACGGAGTGTGAAAATTGACTACAAGAAAAATCCAACAA
TGTCAAAATGTCAAGGACAAGCAAGGATATTTCAAAGACGCTCAAGTGAG
AAGCCAAAAGTTCCAGTGTTGCAACCTTTAAAGATGATGATGTTCGATAC
AGACCCTCTGTCTTTGTTGACAGTGTCACAAAGTtcaggcattgactctc
cagaACTTGTTTCTACTCCAAAGGATCAAAATAAATCACAATCAAATATA
CCTATTGAAGCTTTAAATAGCACAGATCCCCTGAATTTATTTCCAGAAGA
TGATAATTCAATCACCAGGTCAGCTCGCAAACGTAAGAAAAAACGTCATC
GAACATCGTCAATAGTTTGTGGTGAAGACGAGGAATCATACAATACTTCA
GAATTAATTTCCCCAACTGAAGAAACCCCATCAAAGCAACTTAAATATAT
CCAAGACATTCGTTCTCCTATAGTCGAAAAGAATAATGAAAAGACAAAAG
TATCTTTAAAAAGATCCAAATTTAAGTATGGGAATTTCATTAGTTACAAT
AACACCAATGTCGAATCAAGTTCAGTTGACAATATTAAACCTTGGCAAAT
AAATAGGGACCAACGTTtacataatttcaaaaaagaatggtTTTCAGGGA
AGAAGTGTTTATCAATCGGATGCGGGGATGGTCAAATTGTGTATTGGATT
ACCAAGAATTGCCATCCTTTGTTGATCACTGGCTTAGACATAGATGAAGG
ATTGATAAATATTGCTAAAAATAGGAGTAGAGAGTTTCAAGATAATCATA
TAACAGACAAATTAGATTTTCCGGTATCCATTCCAATGAGTTGTGGTCCT
ATTTCTACTGGCTTTAAAATCACACCTAGAAATATAACCAGGAATAATAG
TACCTCATTCATCCATGGCGATTATGTACCAGCATCTCAACAAAGTTTGG
AATCCGTTCAACAGGAATATGAGACCATTGTCTTCTTGAGTACCAGTAAA
TGGATCCATCTCAATTATGGCGATGAAGGACTTAAACGCACTTTCAAGAA
GATTTTCTTTCAACTTCGTCCAGGTGGTCGGTTGTTGTTTGAACCACATA
CTATTAGCTGTTACAAAAAGTCAAGAAATCTAACGACTGGTATCCGGCAG
ACATACGATAAGATGCGATTTCAACCGTCCGACTTCATCACTTATTTACT
TTCATCTGAAGTTGGCTTCAAACAATCTGTTTGCTTGGCACATACACGAA
AACGAAAAACAAataacCTTCGACCGTTGTACTTACTTACAAAAGGTGAT
GGGTGAAGCACAAATTTTAGCatacttaattttttatttcttgtacATTA
TATTTCAACCTGTACATAGTAACCAAAAACTAAATCATCAAACATACCTA
AGTCCTATCAGATCATT
Run BLAST on NCBI

transcript from alignment at scaffold_496:698467..711245+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069213 ID=TCONS_00069213|Name=TCONS_00069213|organism=Clytia hemisphaerica|type=transcript|length=12779bp|location=Sequence derived from alignment at scaffold_496:698467..711245+ (Clytia hemisphaerica)
TATTTTACTTTTAGACCTGATGATGGATAATAATCCCAAATatattgtca
aaaataaaataacaaaatagtTGGTACCAATCTTATGAAAATCTTTGGTA
AGTACATTTGGCACGATTTACATTTagtaccgggtgtgccacaaagaAGT
TACCCTTTTTGATTTAATATTGCAGGcgaaggaaaataaaaaaaatatat
attttttgaattgtttaaaggaaagcctaacttaaaatttggtgtattat
ttttgaaatttgcttTATTAGTTAAGAAGTTATGGACAAAAAACGAAAac
atcaattttaaaaaatgtcaaatatacAAATATAACGGACACAAAAATCA
AATATAACGAAACGATAGAAACATCCGTTTATCGTAGTGAATATAAATTA
CCTAATCATTGGAAGTCGAGAGTTCCAAAACGATACAAACGAAATGCGAT
CAACACAGATATCCACCGGGCAGCCAAAATATCATCGAATTTTGACAACG
AAAAGAAATTGATAAAGGATAAATTTCAACGAGCTGGTTTCCCACCAAGA
TTTATTGATAGTGTATTTCGTCAGTATACAGAAAAATATGAAGACGAGGT
TATCATtccacaaaatttctttgatgagcaaaaagaaaagaatatcaaaa
tcGAAATTCCTTATTgcgagaaaaatgaagaaatatcATCAAAATTCCTA
GAAAAATTCAAAGCCTTTACAAATAATCGGTATAACGTTTCAATAAAATG
GAACACTAAGAAAGTTAGAAACTTGTTCAAAttgaaaagccaaaatccaC
ATCCGTCTTGCAAAATCTACCAAGGAGATTGTATATGCGGGGAAACATAT
ATTGGTGAAACGGAAAGAAATGTTGAAGTCAGGTGGGGTGAACATACGTC
ATCAAGTGGGACATCTGAACCTTCAAAACACCTCCTTAATAACCCTGATC
ATGCTTTCACGTGGAAAATCCTATCGCCTGCTCCaatcaacaaaaaagaa
agaaagagccTGGAAGCGTTTTTAATTGCCTTGAATGCCCCTTCATTGAA
CAATCAAACCGAAACAAAAACTTTACTACTTTTTCGGAATGGCATAACTT
GATTTTAATagcaaaacattttaatattttatgtttttattaccCTTGAG
AAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTTACAGGGATCGTTAAccgataaaatttttaaaagaatct
tatttCTATGGCTTGTCATATTAAATCGAAAAGGGTAACTTCTTTGTGGC
ACACACGGTATATTTGAAGTATAGTATGTCAAAGTAAAATGTTAGAATTG
ATATTCCCAATGAAATAACGACAACTAGTTTGCAAGCAAATGATGATGCA
TATAAACGTTACAACTCGCAATCACCAAAAGCCACCAAGTGACACATTTC
TGAAGGCTTGTTAGCCTGGTTTAAATATATCAAATCCAAACCGGACCAGA
GATTCCCgcaatttgacattttttgataaattttatcctGCTATTTCCGA
AACATTACGCCAAAAATCACTGGTAATTGCACAACAATATATAGATATTC
CTGAAGAAGACGACAATATCATCATACATACTCGCAAATTGCTTTTATTC
GCCAATCGCAGCACCTTGATTAAGTCAAAGGTCAATCCTGACTTTGATGT
TACGATTTAGACTTAGAGTTATGATTGCGTGGAGCTGTGTGAATTGGTTG
ACttaatatatagattaaaaTAAACTTCAGGATCTATGGCATTGACACAT
GTGGTCTTTACAGGTCTTTGCTCTCAATCAAAAATAATAGCTTAAAAGTC
ACAGCCGATGCAAACTTTAGAAATCGTAAACTTCTTAGATATAACATTCA
ACCTAAAAATATAACTATATAAACCCTATTATAAACACAAGAGTGAACCG
ATTAATAATTAAGTACATCCCTAGCATTATATCATCTCGAGAATTCCATT
CAGCAAAAAAGCTTTCGATCAAGCAGCACCCTAATAAATAATGCCCTAAA
AGCAAGTAGCTACAAGGAAATTCAATGAACAAGAAAGATACTGTAAAGAA
AAGTCAGAAACATCAAATCATCTGGTTAAACCCTCCTTTTAGCTTGAATG
GGAAAACgaatatttgacaaaaattcttaATCTTATCTATTATTGAAATT
CTAAACCAAATTATACACTGGTATTGTTCCTGCATATGACAAACGATTTT
AAAACAGACAAGCTCACAAAGTTTCTctttttaaaacttattttcttaaa
cactttttttcaggaccaccaccctttgcagttactacattttggtagta
actgttttgagaaaagatttccaggtaccacccctgtttttgagtgatat
cataaaaaaaatgctcaaaattaccctaaattatttttcaacctaaagcc
atttttgtgctagattttcttttaatttacttggttaacagctgttgaga
acattttaatgataattagggaaagcataatttcaaagtcttTGGGTctg
tccatttataacaaaaatattttttttaacaaagaattttttcacaaaaa
aattcatttttggtgaaaatttttgaaagttcttaataaaaataattaaa
atataagcacttactacaccaaaagtgctagcgttagtgtttggcaccgc
ccccaaacagcagttataCTACACTGTgcagtaactgttttcataacatC
TGAATACAgctcgggtgagttagggcgtgtctagatttttaaaaatcaca
aatcccgaatccgcgaccaatagcacccattctcagggattcacttatgg
atttttagatgaCCTATACCTTCAAGTTTCAGGACCCGGTGTTACGTAAT
TAAATATTAACCTAAAAATTGattattaaagaaagtgtgaattgtgacgt
catcaaattatgacatcataaatcgtaaattagctctaactctataagta
catgtcaaatctttgtcaaattttgaccaaagacgcatctacaaaaaaag
tgttttgaaaccttttttcctTCTTGCTCTAGCAGTGATTTTCTGTTTAC
GTCCATTTTGACAACGAAAtgtgtcccgtccgaaatcattgcACATTGCC
CCTATTTTAAGAGTGTTTATTGAAGGTTTTTTAAGTTTGAGAGTAAGCTC
AATCTATGTGTTTGAAAACCTGtcaaaaagtatgattttaCCATTAGGTT
ACCATTCAATAGGTCCCAGTGCATTGGTGATTGGAAGTGACACCAAAaaa
tgtcccgtccgaaatcacaATAAGATTGACAATATTTCTGAAATTCTGCA
gggtagaaagatttgaatggcTGAATATTGAAATCTAGGATAGAGCATAT
TTTAATTGAGTAAATCTAAGATTCAAAGCTCTTCAGATTTGATTCCAGGG
GTACTAGAAAaaatgtcccgtccgaaattATTAATCCTGTCCGAaatcat
aacttttcaaatatgTTTCAATTTGTAATAAAATGAATGTTTAACATTCA
GGAAGTTATTAGCAAGACCTAGTGGTAAGAAAAANNTCTATTTAGAATAG
TAGTATATTTACTTGTATGCTTACTGATAAGTTTagcaaaacttgaaata
aaacagatttttatgaaaatgatttcggacgggacaggAAAAATTTAGTG
CAAATCACcctgaaaaaagatgaaaaaggtgATAATACAGATTTTTAAGg
gggccccccccagcggtttgcgtgaatgcgtgaatgggcttttttggttg
cgtgaatgcgtgaaaatcgaaaaaaaattgcgtgaatgcgtgaattgNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggaggcggccatgact
tcaccacgtttttgcaaataaaaagaaacttatttcaaagaaatctttac
ccatgatgtagactttcgataacctgattttttggcaaaattagtctgaa
atggattcgtatttaagcacatcagagggttaaaataaaaattttctcct
gtcggcgcaaaacatggttgcgcctccttagtcactatgttttcggcccc
taCACgtaggaaattaattcgcgagcccgtgattaaaacctttcttttta
aatttttttgatcgcCTTCCTCGCAgcaaatgttcattcttttacctcat
tttacaagctatcaagcgatcgtaccttgcctctaacgaatttagactac
attctttttcaatggtgttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNcatcatggtgtcatactcgagtttgtttgac
ctatttttgataatgtttaagctattttttgtacaaaaattcgcctgcgg
cgcatatcttttcacttactattgcgatacgttaactgcagaGGCTTCAC
CTTCTGTTAGACCTTCACAAGTTAGAAGCTTGTCACGATCGTTTGGAGAA
GGTGaagcttcaaatattttgcgtgatggcatgtgattaaaattgaaaaa
ttacgtaacgctttctatttgggggcttcttatgaATGATGCTACcaaac
acggtgttttatagtcaggtctacatgaaaaaatcactactgagttaagt
ttttctcaagtgcatgaccatatccggtcgaataatatctcgagtacagc
cttgtcatacttttttatgcaaatcgaacgttttactccataatggcgga
aattacgtaaattacgtcacttagcgaaatgtgcaagacctctatttttg
acattttccccgattttccccCGATTTtctccgaaaatttccccgatttc
ccaaaaaattgggtttgcgtgaattccgagaaaaacttgcgtgaatgcgt
gaattgcgaaaaaattttgcgtgaatgcatgaaatttgggtccgctgggg
gggcctctttaaGATCTATTTTAATTTGAGGAAGGCCTTTATACGAACAA
TTTCAGGCTGTTCTACAGCTTCCTTAGTTCCTCAAtacatttttctgatg
tattctAGCCTTTAGTTTGCAAATTTTGTCCGTCGGAAATCATTTTCGAT
ATCTACATGCCAATCAAAAGAATGCAACAAAAAAAGGATTTCACCCAAGT
TTAATGATCACCTGTTACAACCCTTATAATATGTGATACTGTCTCCAGTG
CaagttagttttgattttttttaccacaaatttaccattttcataCGTTC
TAACAGCTCCATGAGcccctatatctttattattagGCCTTAAAAGGTGG
TGTCAAGGTACATTTCCATGAAATATAGGCTATAGACTGTCATAGAAAAG
TNNttatttttcatgatttcggacgggacacggtacagatttagcgcaaa
tcgcccataacttttgatgacCCATCCAAATTTAAGTTCATCTTTCTTCt
ggttctttcaaaatttttagataaaGCCCGTGAGCTCGACCAACTTCGCT
TGAGAAgtatgattgacagattaaattcTTCACCCGCGCCGTCGTTCTGC
GAGCATTCTCGGCTAAATCCTCGGaccgtgttaaaaatggtagactcagc
tgtgacagatcatttccatggaagttgttggaatgtttacaagaaaaaga
ctcttgacagaaaatcctttgttttattgtcaatggaTGACAGTGTCGTT
ATTAATTtagttagatctgacatattgatgtttgtaagtgcactttatag
ttttgattcccatcaaAGAATCATTTTCTGGTTTTCATCATGTTATTAGA
tactgttttagagctttagagctagcctgcgAGTGGCTGTCTCTGTCTTC
CCACCCGTCCTATACTACAATTAGCATGAAGTTTTATTGCGGCAGGCAAA
TTAATTTGCTTAGGTGTACGGTCCAAGGTATNTTGAAGTTTTCTTGCGGC
AGGCAAATTAATTTGCTTAGGTGTACGATCCAAGGTATAGACccctttca
taatttttcagcttgttTTGGTTTTCTCGCTTAGTCTTCTTTTCTGtatg
gtcttttttaacaaaatctggAATAAAAGAGACAGAATTCGGAGGCAAAG
TTGGAGGCATATTGCCTCTATTATCCaaatttgtaatatattttatttag
gcTAAACAAGGTAATCCAAAACATATGACATCACATGAAAGGGNCATGAA
GTTTTATTGCGGCAGGCAAATTAATTTGCTTAGGTGTACGGTCCAAGGTA
TTGCCCGAACTTTTTCATGCCATTTAGGTAGCAATCATTTAGTGATTAGG
AACTTGAAAAAGTCCCGAAACAAACAGCATGACCCAAAAATACAAgcaca
aacatcaatttttgaaaaattgatgttaATTACGCTTGTTTGggccagac
gtccgcgctcgataggattgatcatcggaacggcttgatgacggatcgat
atgtgatcgatggattacttaacgatccggataggagatcgatagaggat
cgatactcaagatttttttaagcttatgattagttatcgattatttgtcg
atctatcatcgatcttttatcaaTATCggttacgatcgataacaaatcga
ttaaggatcgatgacgaattgatagaccttttttcaaagaggacgtcctg
ttgaataattatgtagtctaGCCATAGAAACAATGATAGtgtactgtatc
atgcatattgtaataattacgcatggttttatcattgtttttctgctgga
ctacataagtatatacatattcaacagggtggcctctttgaaaaaaggtc
tattaacgatcgatgacgaatcggtatactcgattgaaatactagctcga
taatggatcaacgaaggatcgatactcaagactttttaatggctgaatct
tccatcgatctcctttaagtaatccatcgatcacatatcgatccgtcatc
gagccgttctgatgatcgatcctatcgagcgcccAGTGTGGAATCCATGC
AAAAGCCACGCCGAAGATATTTTGAGGATCAAGAAGGTTACACCCAATTG
AGGACATTctcacgccgaatatattcggtGTACTGTGCATGAATTCCAGA
CTGGTCGAGCGCGGGACAGGTTTTCAGCcttaatctttttttaatctctt
gatatcgaaaaaatcaataaaacatACAGTCAACGTAACGTATACAGTAG
ACCTCATCCCCATATGATACAATGATGATAAACCATGATATGACCAAGAA
AACAGCTCAGTACACACAGACCGCCACAGACCACCACAGACCACCACCAC
AGcttctaaatatttttcatgtgACTCCGCCAACCATGATGTTAGAAATG
TTGTGATTACCTCGATTATTAAGCagtatttttcttgaaaaagcttagat
tttttaaataagcgagacaaaaatattaaattccCGTCAATCAAACTAAA
ATAATCAGATCCACGAATTCTCTGAACGAATGTTTTTGGTATTACTGCTA
ACTTGGAACATGTATTAATGACTTTTTAGAAACTCGCAAATTTCAGTCGC
TGGTTTTCCTCAAAACGTTCGAGGTGCCTGAATCCAgtcaaaacctttaa
actttTAGGAAGCTTCCTGTCGGAAAAACTACTTCATATATGTGAAAAGA
AGGTATGTAACATTATGTTTAACTCAAAGAAGTGTGGCTTGTATCATTAG
GGAGATTTAgtgatttttgtacgatttcTGGGGGCTCTGGGCGTTGCAGT
TGTTTTCAGTTTTAATATGACGACGTCATGGTCTGAGATGGAGAGACCTA
ATTCGTTCTCCATCGTGGCAAAATTGTGAGAACCACAATTTTGATGTTGA
TTGTTCATTTACATTTACCTAGTACCCCTCTAGGCCTCAAGAGTTCATCG
AAAAGCATCCCTTTACAGctgcttttgttttgttttttagttATTGTAAG
AGTTTGTAAGAAAAAGGTCTAAAAAAGAGTGGGCGTTGGAACCTACCTGT
GGACCCTGGCTAGAGGGGAGAGGAGGGCGAGCAAATTGGCTGAAAGGTGG
GTATGTACAGCACTCACGCAAGGGGGGTTTCAGGGGATACTCGATTCCGC
AATTCTGctaattttttctccaatttccgtcaaactgTTTAAAATTGAAC
CTAAATTCTGCCACCAAAAATTCCTTTAAAATTCGAGATTATTGTCAAAA
ATTCCgcgaattttgaatattttttgccaattccaaaattctgcaaaagc
TCCACCAACCATGAACCCCCCGGCACACAAGTCAAAGTGTGCTCCTGTCT
CTGGCAGATTTCCGTCTACGTGAAGTAAATAAAGATTTTGTTTCTTTTAG
GGAGCCGtacatattcatttgacaacgcatagcgtcaaattgacgttacg
agggggtggggggttttcaaaagttgggtttgacgttataagaaatcaaa
ggtatacctttttgtCAAAATCGCGAATATTTGTTTTACCACCAACCACA
CTATACTTTTTAAGTTGtcgaaaatatatttgtgtatgaattacatgaaa
atttgcttgcataatcccattggttcGCGCTATGATGTCATTACgtatca
tattttcattgtttgcgcaATCAAGCGACGGCACGGACCTAGCGCTAAGT
GGagcttttgatttctttctaaataaaggtcattagttaaaagaacacat
acacgCACGTCTACAACCAAGTACGGACTTTGCGatgggaaaactttgat
gaaaaaatggcaacaacttttggtatacaaactttcaaaagtttcaaact
TGCCAAAATTTAAATATTGTTAAATTATTATTGTTTAatatttcatttat
cagggttgttttgtaccgaaaatgttttccaaaaaatttccaaaaaaaag
aatttttttttaacctaCCACCCAGTGTTTAATAGTTAtgtattttaaaa
tcttttctaGATGGAGCCTACCATTCATGCCAAGTCACCCCTTGCAAGCC
CTGACCCATTCAAAGTGTACACAAAACGGAGTGTGAAAATTGACTACAAG
AAAAATCCAACAATGTCAAAATGTCAAGGTAGGCTATAGCGATTTCTTTA
ATTCGCCCATTGTGATGTATTTCCTTTCAGCAATGATATTTGTTTTTCAA
CAAGGTATTCTAAAGCCTGTGGTCAAGTAAAACATACAATATAGTCCATA
ATTATTTGCTCACATTCACTAAGTTCTCTTACACAGCAAAGCAATTTAAA
TTATATTAAAATTGTATTTAACTTCATGCCTTTATTCATTTAGGACAAGC
AAGGATATTTCAAAGACGCTCAAGTGAGAAGCCAAAAGTTCCAGTGTTGC
AACCTTTAAAGATGATGATGTTCGATACAGACCCTCTGTCTTTGTTGACA
GTGTCACAAAGTtcaggcattgactctccagaACTTGTTTCTACTCCAAA
GGATCAAAATAAATCACAATCAAATATACCTATTGAAGCTTTAAATAGCA
CAGATCCCCTGAATTTATTTCCAGAAGATGATAATTCAATCACCAGGTCA
GCTCGCAAACGTAAGAAAAAACGTCATCGAACATCGTCAATAGTTTGTGG
TGAAGACGAGGAATCATACAATACTTCAGAATTAATTTCCCCAACTGAAG
AAACCCCATCAAAGCAACTTAAATATATCCAAGACATTCGTTCTCCTATA
GTCGAAAAGAATAATGAAAAGACAAAAGTATCTTTAAAAAGATCCAAATT
TAAGTATGGGAATTTCATTAGTTACAATAACACCAATGTCGAATCAAGTT
CAGTTGACAATATTAAACCTTGGCAAATAAATAGGGACCAACGTTtacat
aatttcaaaaaagaatggtTTTCAGGGAAGAAGTGTTTATCAATCGGATG
CGGGGATGGTCAAATTGTGTATTGGATTACCAAGAATTGCCATCCTTTGT
TGATCACTGGCTTAGACATAGATGAAGGATTGATAAATATTGCTAAAAAT
AGGAGTAGAGAGTTTCAAGATAATCATATAACAGACAAATTAGATTTTCC
GGTATCCATTCCAATGAGTTGTGGTCCTATTTCTACTGGCTTTAAAATCA
CACCTAGAAATATAACCAGGAATAATAGTACCTCATTCATCCATGTAAGT
CTTTCAATATGTTAATTTACTTGTACTGTGATTAAAAACGTCTTTATATT
CTCTTCGGCTAAGTGAAagctttgatttgatttttttgagctCTATATTT
TGTTGGTAACATATTTATTTAGGGTGATGATCCATGAACCATCTTGACAC
GCACCTTCATTTCACAAGATGCAATTCTGGAAGGTGGTGACTCCTACAAA
AATGGTTTCTTTGGCATGTATGGAAGAGAACAAAATATCCCCCATTTTCT
GATCCTCTTCGTGCAAAGTGTCTCTTTCTATCATTACATCGCCATCATTT
TACGATAAAGGTTAGACCCAAAAGAGATGCCTTTTGAATTGAGATTCAAG
CCTGCACTAAATGGCACTAGAAANAAAAGGTTAGACCCAAAGGAGATGCC
TTTTGAATTGAGATTCAAGCCTGCACTAAATGGCACTAGAAAAGATTAGT
TTGAAGGGATATTGCCATAATCATGTAACTGTCTTGTGGTATTTGCACCT
AAAGATTTGGATGACAAATTTGTGCTTTTAATACTAATGAATTGTTCAAA
CTTTATTTCTCAGGGCGATTATGTACCAGCATCTCAACAAAGTTTGGAAT
CCGTTCAACAGGAATATGAGACCATTGTCTTCTTGAGTACCAGTAAATGG
ATCCATCTCAATTATGGCGATGAAGGACTTAAACGCACTTTCAAGAAGAT
TTTCTTTCAACTTCGTCCAGGTGGTCGGTTGTTGTTTGAACCACATACTA
TTAGCTGTTACAAAAAGTCAAGAAATCTAACGGTAATTGTCTTTTTAAAT
GGAACTGATTTATAGTGAGTCCCACctaaattctgtcatttttaatGCAT
GTACGCTGTAGCCAAATGCATTGGTTTTATCCGTTTTGCTCTAATCTCTA
GCAAGGATCCATTTTCTTTTGACCTGATTGCTTGCAGCGAGTCTAAACCA
ACACGCCCTTTTTTGGTTACGAAATTTATGCTATCGTAAATCTTTTGCTG
AAAAACGTCATATAATGAAAGTCTCAGAACCCTTTGTCGTTTACTGTATG
TAAAAGTATGATACGACTCTTAACCTAACCGATGTAAATCATAtaatgtc
tctttttattgGAATTTAGACTGGTATCCGGCAGACATACGATAAGATGC
GATTTCAACCGTCCGACTTCATCACTTATTTACTTTCATCTGAAGTTGGC
TTCAAACAATCTGTTTGCTTGGCACATACACGAAAACGAAAAACAAGTAA
GAAATTCTCCTCTAAAGACTTCGTAATGGCTTCCTTCTTCTTTTATCTTT
GTTGGATTGTTTCCACGATAAAAAGTTgtgttgatttcatttttttttcg
caCTGAAGTCTCTATATCATTTTGAGCGGAAGCTCTTAACTAATCTCTAG
TAAAGCGAACGTAATTAAAATTTCTAGTTCGATTATTTTATACTTATACA
TTATtacttctgtttttttttcagataacCTTCGACCGTTGTACTTACTT
ACAAAAGGTGATGGGTGAAGCACAAATTTTAGCatacttaattttttatt
tcttgtacATTATATTTCAACCTGTACATAGTAACCAAAAACTAAATCAT
CAAACATACCTAAGTCCTATCAGATCATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043136XLOC_043136Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069213-exon-scaffold_496-1491911889:698467..698563TCONS_00069213-exon-scaffold_496-1491911889:698467..698563Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:698467..698563TCONS_00069213-exon-scaffold_496-1510915933:698467..698563Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:698467..698563TCONS_00069213-exon-scaffold_496-1575043694:698467..698563Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1491911889:708427..708544TCONS_00069213-exon-scaffold_496-1491911889:708427..708544Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:708427..708544TCONS_00069213-exon-scaffold_496-1510915933:708427..708544Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:708427..708544TCONS_00069213-exon-scaffold_496-1575043694:708427..708544Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1491911889:708760..709610TCONS_00069213-exon-scaffold_496-1491911889:708760..709610Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:708760..709610TCONS_00069213-exon-scaffold_496-1510915933:708760..709610Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:708760..709610TCONS_00069213-exon-scaffold_496-1575043694:708760..709610Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1491911889:710180..710398TCONS_00069213-exon-scaffold_496-1491911889:710180..710398Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:710180..710398TCONS_00069213-exon-scaffold_496-1510915933:710180..710398Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:710180..710398TCONS_00069213-exon-scaffold_496-1575043694:710180..710398Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1491911889:710736..710862TCONS_00069213-exon-scaffold_496-1491911889:710736..710862Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:710736..710862TCONS_00069213-exon-scaffold_496-1510915933:710736..710862Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:710736..710862TCONS_00069213-exon-scaffold_496-1575043694:710736..710862Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1491911889:711091..711245TCONS_00069213-exon-scaffold_496-1491911889:711091..711245Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1510915933:711091..711245TCONS_00069213-exon-scaffold_496-1510915933:711091..711245Clytia hemisphaericaexon
TCONS_00069213-exon-scaffold_496-1575043694:711091..711245TCONS_00069213-exon-scaffold_496-1575043694:711091..711245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:698467..711245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
47.6888	50.2672	17.6049	13.4139	41.9995	24.7727	35.2083	31.3793	25.998	20.5376	25.9797	31.5557	12.3479	15.8073	16.4847	14.7875	13.6147	14.7853	17.042	13.7112	29.9905	34.8352	77.2165	62.028	25.8475	24.9953	17.7172	19.4005	58.3553	74.2192
Blast
[Close]
BLAST of TCONS_00069213 vs. Swiss-Prot (Human)
Match: MEPCE (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.781e-38
Identity = 92/295 (31.19%), Postives = 134/295 (45.42%), Query Frame = 2 
Query:  659 KRSKFKYGNFI---SYNNTNVESSSVDNIKPWQINRDQRLHNFKKEWFSGKKCLSIGCGDGQIVYWITKNCHPLLITGLDIDEGLINIAKNRSREFQDNH----------------------ITDKLDFPVSIPMSCGPIST--------GFKITPRNITRNNSTSFIHGDYVPASQQSLESVQQEYETIVFLSTSKWIHLNYGDEGLKRTFKKIFFQLRPGGRLLFEPHTISCYKKSRNLTTGIRQTYDKMRFQPSDFITYLLSSEVGFKQSVCLAHTRKRKTNNLRPLYLLTK 1444
            ++ KF+YGN+     Y N + E              D RL   K EWF G+  L +GC  G +   I     P  + GLDID  LI+ A+   R +                          +  +  FP S+  S GPI+            + P N+       F+ G+YV      +E+   EY+ ++ LS +KW+HLN+GDEGLKR F++I+  LRPGG L+ EP   S Y K + LT  I + Y +++ +P  F +YL S +VGF     +A          RP+YL  K
Sbjct:  409 QQRKFQYGNYCKYYGYRNPSCE--------------DGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVV------FVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLFHK 683
The following BLAST results are available for this feature:
BLAST of TCONS_00069213 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEPCE9.781e-3831.197SK snRNA methylphosphate capping enzyme OS=Homo s... [more]
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