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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069205 ID=TCONS_00069205|Name=TCONS_00069205|organism=Clytia hemisphaerica|type=transcript|length=1279bp
Ngtgtcaacatcaacaagtgtcagcacatacaaaccggtcactacttctg
tccaatcaccatcaccatctacaagcaaaccagctccatcgACATCATTG
GCAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATCTCGTC
TACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACAAATTG
AAGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATTccatca
tcatcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACACCAAG
TCTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATCTTCAT
CAAGCATCCAACCCACCTCCAGTTCCACTGTCATCCCAACAAGCTCAGTT
ACACCATTGTGTCCCGCTTGTTTCCACAAAGGAAGTTATTACTCAGTCAA
TGAGACATGGCAAGATGCAAGCAAATGTATCAACTACACTTGTGTCGAAG
TCAACAATCCATGTTTCCCAAGCAATGTTTCCACACAAATTGAAGTCACG
ACTCCAGTCTGTCCAAAATGTCCACAGGGATACGATACCGTTGAGGATCC
AACTGCATGTTGTCCAAAATGTGTACCAACCGAAAACATCCCAAGTGTTT
GCAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAATGGAAGACAAAGGA
GTCAAATGTTGGTCCACAAAGAAATACAAACATACTGGATGCGCTGGTCT
TTGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGCATGTTGACGCCGT
CATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACATAACGTCACAATG
CAATGTACTGACGGACATAAATTCTTCGTCGATTTCCATGAATTCGAAAG
CTGTCAATGTAAGATCCAGAAATGTGGTAATAATTATGACACCTCGGGTG
TAGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAGCAAACGATCCTTC
ATTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAATGAAAGAACGTCA
ACGACGCAATTTGTTGAACGATCTTGCAATGTTGCATGCTAACAAGAAGA
AACGTTAAACTGGAAAATATTATagtagttttttttaaaagaatgctGAC
TGACGCTCAGCCTTTATGTTGTGTAAATGTGTAAtttattttgtcatttt
atttttcaatggaAGAAGGAAatagattatttttttcaagggaaatatat
tttaaaattgaacatgaatgaaaaacaat Run BLAST on NCBI protein sequence of TCONS_00069205-protein >TCONS_00069205-protein ID=TCONS_00069205-protein|Name=TCONS_00069205-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
VSTSTSVSTYKPVTTSVQSPSPSTSKPAPSTSLATTTSTLTSFVTTVISS
TSFTLPILTTTEITQIEGSKSTIVFSPSTSIPSSSSSSTQSTSALSTTPS
LSTSIQTTASSSSPSSSSIQPTSSSTVIPTSSVTPLCPACFHKGSYYSVN
ETWQDASKCINYTCVEVNNPCFPSNVSTQIEVTTPVCPKCPQGYDTVEDP
TACCPKCVPTENIPSVCKVKNFRIVEIEMEDKGVKCWSTKKYKHTGCAGL
CESTVSATPGSSMLTPSCSCCQPSRVVKHNVTMQCTDGHKFFVDFHEFES
CQCKIQKCGNNYDTSGVEVVTSGGGEERSKRSFIEDLAETGLDPKMKERQ
RRNLLNDLAMLHANKKKR Run BLAST on NCBI transcript from alignment at scaffold_496:638454..640310+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069205 ID=TCONS_00069205|Name=TCONS_00069205|organism=Clytia hemisphaerica|type=transcript|length=1857bp|location=Sequence derived from alignment at scaffold_496:638454..640310+ (Clytia hemisphaerica)
Ngtgtcaacatcaacaagtgtcagcacatacaaaccggtcactacttctg
tccaatcaccatcaccatctacaagcaaaccagctccatcgACATCGATT
GGAAGCTCATCAAGCCAAGCTACAAGCAGTACTCCATACGTTAGTTCTTC
TGTATCTACACCATCTTCGAGCTCAGTATTTACATCCAGCAGTGCaagtt
caagtgtgtcaacTTCAACAACTGTCAGCACATACAAACCAATCACTACT
TCTGTCCAATCACCTTCACCATCtacaagcaaaccagctccatcTACATC
ATTGGCAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATCT
CGTCTACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACAA
ATTGAAGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATTcc
atcatcatcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACAC
CAAGTCTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATCT
TCATCAAGCATCCAACCCACCTCCAGTTCCACTGTCATCCCAACAAGCTC
AGTTACACCATGTAAGTTCATTTTCTTTGGTAATTATTTCGACAAGTTGA
CTGCTCTTGATCGAAGAAATATGTATTTTGCacaatgttttatttttcat
gtttcaCTAATAATGCCAATATTGATaaaatttcctcctttttgAATTTC
AGTGTGTCCCGCTTGTTTCCACAAAGGAAGTTATTACTCAGTCAATGAGA
CATGGCAAGATGCAAGCAAATGTATCAACTACACTTGTGTCGAAGTCAAC
AATCCATGTTTCCCAAGCAATGTTTCCACACAAATTGAAGTCACGACTCC
AGTCTGTCCAAAATGTCCACAGGTAAGAATCTCTTCTCCGTTGTAAACAG
TAAACATCAATTATTGCAAAGTTTGAAGAATTCGAGTTAAGTTTTTGTGT
ACATTTTAAGTTCCATCTGATACGAAAAAGTTTGCTTTGTATTGACGACT
GTTTCGTTGACCACTGTTGACCAGAGAAagctaatgagttcgaaatcaAA
GCTAAAAGTTATAAACTGAAATACTTATCAtgaactttctttttcttcaa
accaGGGATACGATACCGTTGAGGATCCAACTGCATGTTGTCCAAAATGT
GTACCAACCGAAAACATCCCAAGTGTTTGCAAAGTCAAGAACTTCAGAAT
TGTCGAAATCGAAATGGAAGACAAAGGAGTCAAATGTTGGTCCACAAAGA
AATACAAACATACTGGATGCGCTGGTCTTTGTGAATCTACCGTCTCTGCC
ACACCAGGAAGCAGCATGTTGACGCCGTCATGTTCTTGTTGTCAACCGTC
ACGTGTCGTCAAACATAACGTCACAATGCAATGTACTGACGGACATAAAT
TCTTCGTCGATTTCCATGAATTCGAAAGCTGTCAATGTAAGATCCAGAAA
TGTGGTAATAATTATGACACCTCGGGTGTAGAGGTGGTCACATCGGGTGG
AGGTGAAGAACGAAGCAAACGATCCTTCATTGAAGACCTCGCCGAAACTG
GATTAGACCCGAAAATGAAAGAACGTCAACGACGCAATTTGTTGAACGAT
CTTGCAATGTTGCATGCTAACAAGAAGAAACGTTAAACTGGAAAATATTA
TagtagttttttttaaaagaatgctGACTGACGCTCAGCCTTTATGTTGT
GTAAATGTGTAAtttattttgtcattttatttttcaatggaAGAAGGAAa
tagattatttttttcaagggaaatatattttaaaattgaacatgaatgaa
aaacaat Coding sequence (CDS) from alignment at scaffold_496:638454..640310+ >TCONS_00069205 ID=TCONS_00069205|Name=TCONS_00069205|organism=Clytia hemisphaerica|type=CDS|length=4428bp|location=Sequence derived from alignment at scaffold_496:638454..640310+ (Clytia hemisphaerica)
gtgtcaacatcaacaagtgtcagcacatacaaaccggtcactacttctgt
ccaatcaccatcaccatctacaagcaaaccagctccatcgACATCATTGG
CAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTATCTCGTCT
ACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACACAAATTGA
AGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATTccatcat
catcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAACACCAAGT
CTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCATCTTCATC
AAGCATCCAACCCACCTCCAGTTCCACTGTCATCCCAACAAGCTCAGTTA
CACCATTGTGTCCCGCTTGTTTCCACAAAGGAAGTTATTACTCAGTCAAT
GAGACATGGCAAGATGCAAGCAAATGTATCAACTACACTTGTGTCGAAGT
CAACAATCCATGTTTCCCAAGCAATGTTTCCACACAAATTGAAGTCACGA
CTCCAGTCTGTCCAAAATGTCCACAGGGATACGATACCGTTGAGGATCCA
ACTGCATGTTGTCCAAAATGTGTACCAACCGAAAACATCCCAAGTGTTTG
CAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAATGGAAGACAAAGGAG
TCAAATGTTGGTCCACAAAGAAATACAAACATACTGGATGCGCTGGTCTT
TGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGCATGTTGACGCCGTC
ATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACATAACGTCACAATGC
AATGTACTGACGGACATAAATTCTTCGTCGATTTCCATGAATTCGAAAGC
TGTCAATGTAAGATCCAGAAATGTGGTAATAATTATGACACCTCGGGTGT
AGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAGCAAACGATCCTTCA
TTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAATGAAAGAACGTCAA
CGACGCAATTTGTTGAACGATCTTGCAATGTTGCATGCTAACAAGAAGAA
ACGTTAAgtgtcaacatcaacaagtgtcagcacatacaaaccggtcacta
cttctgtccaatcaccatcaccatctacaagcaaaccagctccatcgACA
TCATTGGCAACTACCACATCGACTTTGACTTCTTTCGTTACCACTGTTAT
CTCGTCTACCTCTTTCACACTGCCAATCTTAACTACAACTGAGATCACAC
AAATTGAAGGAAGCAAATCAACAATCGTCTTTTCACCATCAACAAGCATT
ccatcatcatcgtcatcttcAACCCAAAGCACATCTGCATTATCAACAAC
ACCAAGTCTTTCCACATCCATCCAAACAACTGCATCTTCATCTTCACCAT
CTTCATCAAGCATCCAACCCACCTCCAGTTCCACTGTCATCCCAACAAGC
TCAGTTACACCATTGTGTCCCGCTTGTTTCCACAAAGGAAGTTATTACTC
AGTCAATGAGACATGGCAAGATGCAAGCAAATGTATCAACTACACTTGTG
TCGAAGTCAACAATCCATGTTTCCCAAGCAATGTTTCCACACAAATTGAA
GTCACGACTCCAGTCTGTCCAAAATGTCCACAGGGATACGATACCGTTGA
GGATCCAACTGCATGTTGTCCAAAATGTGTACCAACCGAAAACATCCCAA
GTGTTTGCAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAATGGAAGAC
AAAGGAGTCAAATGTTGGTCCACAAAGAAATACAAACATACTGGATGCGC
TGGTCTTTGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGCATGTTGA
CGCCGTCATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACATAACGTC
ACAATGCAATGTACTGACGGACATAAATTCTTCGTCGATTTCCATGAATT
CGAAAGCTGTCAATGTAAGATCCAGAAATGTGGTAATAATTATGACACCT
CGGGTGTAGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAGCAAACGA
TCCTTCATTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAATGAAAGA
ACGTCAACGACGCAATTTGTTGAACGATCTTGCAATGTTGCATGCTAACA
AGAAGAAACGTTAAgtgtcaacatcaacaagtgtcagcacatacaaaccg
gtcactacttctgtccaatcaccatcaccatctacaagcaaaccagctcc
atcgACATCATTGGCAACTACCACATCGACTTTGACTTCTTTCGTTACCA
CTGTTATCTCGTCTACCTCTTTCACACTGCCAATCTTAACTACAACTGAG
ATCACACAAATTGAAGGAAGCAAATCAACAATCGTCTTTTCACCATCAAC
AAGCATTccatcatcatcgtcatcttcAACCCAAAGCACATCTGCATTAT
CAACAACACCAAGTCTTTCCACATCCATCCAAACAACTGCATCTTCATCT
TCACCATCTTCATCAAGCATCCAACCCACCTCCAGTTCCACTGTCATCCC
AACAAGCTCAGTTACACCATTGTGTCCCGCTTGTTTCCACAAAGGAAGTT
ATTACTCAGTCAATGAGACATGGCAAGATGCAAGCAAATGTATCAACTAC
ACTTGTGTCGAAGTCAACAATCCATGTTTCCCAAGCAATGTTTCCACACA
AATTGAAGTCACGACTCCAGTCTGTCCAAAATGTCCACAGGGATACGATA
CCGTTGAGGATCCAACTGCATGTTGTCCAAAATGTGTACCAACCGAAAAC
ATCCCAAGTGTTTGCAAAGTCAAGAACTTCAGAATTGTCGAAATCGAAAT
GGAAGACAAAGGAGTCAAATGTTGGTCCACAAAGAAATACAAACATACTG
GATGCGCTGGTCTTTGTGAATCTACCGTCTCTGCCACACCAGGAAGCAGC
ATGTTGACGCCGTCATGTTCTTGTTGTCAACCGTCACGTGTCGTCAAACA
TAACGTCACAATGCAATGTACTGACGGACATAAATTCTTCGTCGATTTCC
ATGAATTCGAAAGCTGTCAATGTAAGATCCAGAAATGTGGTAATAATTAT
GACACCTCGGGTGTAGAGGTGGTCACATCGGGTGGAGGTGAAGAACGAAG
CAAACGATCCTTCATTGAAGACCTCGCCGAAACTGGATTAGACCCGAAAA
TGAAAGAACGTCAACGACGCAATTTGTTGAACGATCTTGCAATGTTGCAT
GCTAACAAGAAGAAACGTTAAgtgtcaacatcaacaagtgtcagcacata
caaaccggtcactacttctgtccaatcaccatcaccatctacaagcaaac
cagctccatcgACATCATTGGCAACTACCACATCGACTTTGACTTCTTTC
GTTACCACTGTTATCTCGTCTACCTCTTTCACACTGCCAATCTTAACTAC
AACTGAGATCACACAAATTGAAGGAAGCAAATCAACAATCGTCTTTTCAC
CATCAACAAGCATTccatcatcatcgtcatcttcAACCCAAAGCACATCT
GCATTATCAACAACACCAAGTCTTTCCACATCCATCCAAACAACTGCATC
TTCATCTTCACCATCTTCATCAAGCATCCAACCCACCTCCAGTTCCACTG
TCATCCCAACAAGCTCAGTTACACCATTGTGTCCCGCTTGTTTCCACAAA
GGAAGTTATTACTCAGTCAATGAGACATGGCAAGATGCAAGCAAATGTAT
CAACTACACTTGTGTCGAAGTCAACAATCCATGTTTCCCAAGCAATGTTT
CCACACAAATTGAAGTCACGACTCCAGTCTGTCCAAAATGTCCACAGGGA
TACGATACCGTTGAGGATCCAACTGCATGTTGTCCAAAATGTGTACCAAC
CGAAAACATCCCAAGTGTTTGCAAAGTCAAGAACTTCAGAATTGTCGAAA
TCGAAATGGAAGACAAAGGAGTCAAATGTTGGTCCACAAAGAAATACAAA
CATACTGGATGCGCTGGTCTTTGTGAATCTACCGTCTCTGCCACACCAGG
AAGCAGCATGTTGACGCCGTCATGTTCTTGTTGTCAACCGTCACGTGTCG
TCAAACATAACGTCACAATGCAATGTACTGACGGACATAAATTCTTCGTC
GATTTCCATGAATTCGAAAGCTGTCAATGTAAGATCCAGAAATGTGGTAA
TAATTATGACACCTCGGGTGTAGAGGTGGTCACATCGGGTGGAGGTGAAG
AACGAAGCAAACGATCCTTCATTGAAGACCTCGCCGAAACTGGATTAGAC
CCGAAAATGAAAGAACGTCAACGACGCAATTTGTTGAACGATCTTGCAAT
GTTGCATGCTAACAAGAAGAAACGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069205-exon-scaffold_496-1491911889:638454..638546 | TCONS_00069205-exon-scaffold_496-1491911889:638454..638546 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1510915933:638454..638546 | TCONS_00069205-exon-scaffold_496-1510915933:638454..638546 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1575043694:638454..638546 | TCONS_00069205-exon-scaffold_496-1575043694:638454..638546 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1491911889:638751..639064 | TCONS_00069205-exon-scaffold_496-1491911889:638751..639064 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1510915933:638751..639064 | TCONS_00069205-exon-scaffold_496-1510915933:638751..639064 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1575043694:638751..639064 | TCONS_00069205-exon-scaffold_496-1575043694:638751..639064 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1491911889:639206..639375 | TCONS_00069205-exon-scaffold_496-1491911889:639206..639375 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1510915933:639206..639375 | TCONS_00069205-exon-scaffold_496-1510915933:639206..639375 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1575043694:639206..639375 | TCONS_00069205-exon-scaffold_496-1575043694:639206..639375 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1491911889:639609..640310 | TCONS_00069205-exon-scaffold_496-1491911889:639609..640310 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1510915933:639609..640310 | TCONS_00069205-exon-scaffold_496-1510915933:639609..640310 | Clytia hemisphaerica | exon |
| TCONS_00069205-exon-scaffold_496-1575043694:639609..640310 | TCONS_00069205-exon-scaffold_496-1575043694:639609..640310 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_496 | supercontig | scaffold_496:638454..640310 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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