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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069180 ID=TCONS_00069180|Name=TCONS_00069180|organism=Clytia hemisphaerica|type=transcript|length=1404bp
TTATGGGACACGCTGTATAAAAAAAATGAGCCTGGATTTAGGGGGGACGA
GTATTTTTTCTTCggtttaaaagaaaataatatgaaCTACTAAAGATACA
TTATTATCATTGCATGCATGAAAAAATACTATATTGTTCACCATATGTAA
TGATTATTTCGAGTTGTGTAACTCGAATTTCTCGGatttatttgcttttt
taatattttaaaaaaaatgcgtaccaaatttataaataaagcaactgaaa
aaaatttacaaccCTCACAAGATAAATATACTAGACAAAAAAACGTATAA
CACCTTAAACGAAAATGCGTTTCAAAAATCTCAGAAACTTTAAATTTCAC
TATGAAAATTAACTGATTTAATTTAGCGACGtcagaaaatttttacttta
aactttgaataaatgagttgatttaattttgcggaatCTTGgagaaatat
ttgttttgatatcgCAAAATTAACAGAATTAGTGACAAAAAGGTTCTTCG
AAATTCATAAAAGCAAAActgaaatgtaattttttttaaataattcacta
caaaaatcatcatcatgcACGTGCTTATAAAATATGCTTGAAGTCATCAT
AATGTCATCACAAAAAATATCATTGAAAATacccttttttttttaaatat
acttcGTAGCTCGGTAGCTACATAACATATACGAggaaaagatttcaaag
aagGGTTTAGAAGGCGGAGCAgattattattttaaaataagtttcttata
aaaatcgcCCTTAAAAGATGAATGGATGTAAAATAGTCTCAAAGGAGggc
aatttcaagaaaattcatttcataTGATTAAGAAGATTATAACATTAAAA
GGGTTTCTTAGATAGTCTGAGATATTTTTCTtagatggtctgagatattt
tcCTTATCTCCTGCAAAACTTTACTTTTTGgcaagaaaacaatagaattt
tagcGTAAGAACCATGTAAGactctgtttttttttagagATCTTAAATTG
GCATATGTCGACTTTGGAATTGAATTAGGCAAAAAGATTTGCAGTTTTCG
CTCAGGACCAAGGAAAAAACATCTACAGGCGAAACATCTGATTAACCCTT
TAATGTTTCCTAATCCTTCTGAGGCGAACCAAGGTTATCCCATGGAGCAT
TCATACAAAAGAATACCTTCAGGATCGAACACGTGTATNTTTTTGgcaag
aaaacaatagaattttagcGTAAGAACCCATGTAAGACTCACTGTACTTT
ATAAATAAATACCACCGTTAAGTatgaaatgtaaacaaagacATAACCCA
AAGCATGTGTCAGTGACTTGCTTATACTGGCAGCAActgaaaatagaaga
aaaaagaatgaattttttttattttgaattttgtagTCTTTTTGACATTA
GACC Run BLAST on NCBI transcript from alignment at scaffold_495:122791..124194 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069180 ID=TCONS_00069180|Name=TCONS_00069180|organism=Clytia hemisphaerica|type=transcript|length=1404bp|location=Sequence derived from alignment at scaffold_495:122791..124194 (Clytia hemisphaerica)
GGTCTAATGTCAAAAAGActacaaaattcaaaataaaaaaaattcattct
tttttcttctattttcagTTGCTGCCAGTATAAGCAAGTCACTGACACAT
GCTTTGGGTTATgtctttgtttacatttcatACTTAACGGTGGTATTTAT
TTATAAAGTACAGTGAGTCTTACATGGGTTCTTACgctaaaattctattg
ttttcttgcCAAAAANATACACGTGTTCGATCCTGAAGGTATTCTTTTGT
ATGAATGCTCCATGGGATAACCTTGGTTCGCCTCAGAAGGATTAGGAAAC
ATTAAAGGGTTAATCAGATGTTTCGCCTGTAGATGTTTTTTCCTTGGTCC
TGAGCGAAAACTGCAAATCTTTTTGCCTAATTCAATTCCAAAGTCGACAT
ATGCCAATTTAAGATctctaaaaaaaaacagagtCTTACATGGTTCTTAC
gctaaaattctattgttttcttgcCAAAAAGTAAAGTTTTGCAGGAGATA
AGgaaaatatctcagaccatctaAGAAAAATATCTCAGACTATCTAAGAA
ACCCTTTTAATGTTATAATCTTCTTAATCAtatgaaatgaattttcttga
aattgccCTCCTTTGAGACTATTTTACATCCATTCATCTTTTAAGGgcga
tttttataagaaacttattttaaaataataatcTGCTCCGCCTTCTAAAC
CcttctttgaaatcttttccTCGTATATGTTATGTAGCTACCGAGCTACg
aagtatatttaaaaaaaaaagggtATTTTCAATGATATTTTTTGTGATGA
CATTATGATGACTTCAAGCATATTTTATAAGCACGTgcatgatgatgatt
tttgtagtgaattatttaaaaaaaattacatttcagTTTTGCTTTTATGA
ATTTCGAAGAACCTTTTTGTCACTAATTCTGTTAATTTTGcgatatcaaa
acaaatatttctcCAAGattccgcaaaattaaatcaactcatttattcaa
agtttaaagtaaaaattttctgaCGTCGCTAAATTAAATCAGTTAATTTT
CATAGTGAAATTTAAAGTTTCTGAGATTTTTGAAACGCATTTTCGTTTAA
GGTGTTATACGTTTTTTTGTCTAGTATATTTATCTTGTGAGggttgtaaa
tttttttcagttgctttatttataaatttggtacgcattttttttaaaat
attaaaaaagcaaataaatCCGAGAAATTCGAGTTACACAACTCGAAATA
ATCATTACATATGGTGAACAATATAGTATTTTTTCATGCATGCAATGATA
ATAATGTATCTTTAGTAGttcatattattttcttttaaaccGAAGAAAAA
ATACTCGTCCCCCCTAAATCCAGGCTCATTTTTTTTATACAGCGTGTCCC
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069180-exon-scaffold_495-1491911889:122791..124194 | TCONS_00069180-exon-scaffold_495-1491911889:122791..124194 | Clytia hemisphaerica | exon |
| TCONS_00069180-exon-scaffold_495-1510915933:122791..124194 | TCONS_00069180-exon-scaffold_495-1510915933:122791..124194 | Clytia hemisphaerica | exon |
| TCONS_00069180-exon-scaffold_495-1575043694:122791..124194 | TCONS_00069180-exon-scaffold_495-1575043694:122791..124194 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_495 | supercontig | scaffold_495:122791..124194 . |
Blast
The following BLAST results are available for this feature:
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