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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069179 ID=TCONS_00069179|Name=TCONS_00069179|organism=Clytia hemisphaerica|type=transcript|length=815bp
CTGCCCTCTGCCTCTTGCACCTCTGAGGCGAGGGCTCCACCGAAAGGGCC
ATCTTCCACCCGAAAAATTGCCACCACGACCGTAACCATTATTGTAACCA
ACCGTATGATGGGACTGTCCACGTGGGTAACCACGCCCACGTCCACGTCC
TCGGGTCTGCAGACCAGATTGAGGCTTCTTCAGTGCGGTAAAAGCCGTCC
GAGCTTTCGAACGAATCGATGAATTTTTCGAGAGTTCCTCATCAAAGGAA
GGTCCAAATAGTTCTGGATTCCCTGGGTTATCCAGTTTAGTTGATTGAGT
TTTCAGAATGTCCTTGACCGTAGGTTGACTTGTTATGAGGCTGGACAGTA
CCCCCAGTCTTCGCTGGTAAGAAATATCATTGAAGCATTGAGCAAGTAAA
ATTATAGTCTGATCAAATAATCTTGCGGGCTCTGCCAAGGTGTCTTCCTG
ATCATTGTCCAAGAGCGCCTGGCGCTCTGACTCAACCATGTCCCAAATGA
TGCACATAGGACCCAATACCGCATGGACACCATCATGTATGCCCTTGAGT
GTTTTGTCTCTATGAAGCACGTCCAATTTAGAATGTTCTTGTAACAATTC
CTTTATATGTGTGTCCAAGATTGGAacatttttaatgtttattggCGTGG
GTGATTCGTCTAAGATTTTTTCCTTAATCTGACGATTATTGACGtggttg
gagagatatttgtttAGATAAACAGCCTGGGCCTCCCTCAACTCCCAGAC
TCTACCATCTTCGTTCTCGTCAAGTTCATATCTGGCTAATTTTGGGCCTG
GTTGCAGATGACCAT Run BLAST on NCBI protein sequence of TCONS_00069179-protein >TCONS_00069179-protein ID=TCONS_00069179-protein|Name=TCONS_00069179-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
GHLQPGPKLARYELDENEDGRVWELREAQAVYLNKYLSNHVNNRQIKEKI
LDESPTPINIKNVPILDTHIKELLQEHSKLDVLHRDKTLKGIHDGVHAVL
GPMCIIWDMVESERQALLDNDQEDTLAEPARLFDQTIILLAQCFNDISYQ
RRLGVLSSLITSQPTVKDILKTQSTKLDNPGNPELFGPSFDEELSKNSSI
RSKARTAFTALKKPQSGLQTRGRGRGRGYPRGQSHHTVGYNNGYGRGGNF
SGGRWPFRWSPRLRGARGRGQ Run BLAST on NCBI transcript from alignment at scaffold_495:113460..114274 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069179 ID=TCONS_00069179|Name=TCONS_00069179|organism=Clytia hemisphaerica|type=transcript|length=815bp|location=Sequence derived from alignment at scaffold_495:113460..114274 (Clytia hemisphaerica)
ATGGTCATCTGCAACCAGGCCCAAAATTAGCCAGATATGAACTTGACGAG
AACGAAGATGGTAGAGTCTGGGAGTTGAGGGAGGCCCAGGCTGTTTATCT
aaacaaatatctctccaaccaCGTCAATAATCGTCAGATTAAGGAAAAAA
TCTTAGACGAATCACCCACGccaataaacattaaaaatgtTCCAATCTTG
GACACACATATAAAGGAATTGTTACAAGAACATTCTAAATTGGACGTGCT
TCATAGAGACAAAACACTCAAGGGCATACATGATGGTGTCCATGCGGTAT
TGGGTCCTATGTGCATCATTTGGGACATGGTTGAGTCAGAGCGCCAGGCG
CTCTTGGACAATGATCAGGAAGACACCTTGGCAGAGCCCGCAAGATTATT
TGATCAGACTATAATTTTACTTGCTCAATGCTTCAATGATATTTCTTACC
AGCGAAGACTGGGGGTACTGTCCAGCCTCATAACAAGTCAACCTACGGTC
AAGGACATTCTGAAAACTCAATCAACTAAACTGGATAACCCAGGGAATCC
AGAACTATTTGGACCTTCCTTTGATGAGGAACTCTCGAAAAATTCATCGA
TTCGTTCGAAAGCTCGGACGGCTTTTACCGCACTGAAGAAGCCTCAATCT
GGTCTGCAGACCCGAGGACGTGGACGTGGGCGTGGTTACCCACGTGGACA
GTCCCATCATACGGTTGGTTACAATAATGGTTACGGTCGTGGTGGCAATT
TTTCGGGTGGAAGATGGCCCTTTCGGTGGAGCCCTCGCCTCAGAGGTGCA
AGAGGCAGAGGGCAG Coding sequence (CDS) from alignment at scaffold_495:113460..114274 >TCONS_00069179 ID=TCONS_00069179|Name=TCONS_00069179|organism=Clytia hemisphaerica|type=CDS|length=813bp|location=Sequence derived from alignment at scaffold_495:113460..114274 (Clytia hemisphaerica)
GGTCATCTGCAACCAGGCCCAAAATTAGCCAGATATGAACTTGACGAGAA
CGAAGATGGTAGAGTCTGGGAGTTGAGGGAGGCCCAGGCTGTTTATCTaa
acaaatatctctccaaccaCGTCAATAATCGTCAGATTAAGGAAAAAATC
TTAGACGAATCACCCACGccaataaacattaaaaatgtTCCAATCTTGGA
CACACATATAAAGGAATTGTTACAAGAACATTCTAAATTGGACGTGCTTC
ATAGAGACAAAACACTCAAGGGCATACATGATGGTGTCCATGCGGTATTG
GGTCCTATGTGCATCATTTGGGACATGGTTGAGTCAGAGCGCCAGGCGCT
CTTGGACAATGATCAGGAAGACACCTTGGCAGAGCCCGCAAGATTATTTG
ATCAGACTATAATTTTACTTGCTCAATGCTTCAATGATATTTCTTACCAG
CGAAGACTGGGGGTACTGTCCAGCCTCATAACAAGTCAACCTACGGTCAA
GGACATTCTGAAAACTCAATCAACTAAACTGGATAACCCAGGGAATCCAG
AACTATTTGGACCTTCCTTTGATGAGGAACTCTCGAAAAATTCATCGATT
CGTTCGAAAGCTCGGACGGCTTTTACCGCACTGAAGAAGCCTCAATCTGG
TCTGCAGACCCGAGGACGTGGACGTGGGCGTGGTTACCCACGTGGACAGT
CCCATCATACGGTTGGTTACAATAATGGTTACGGTCGTGGTGGCAATTTT
TCGGGTGGAAGATGGCCCTTTCGGTGGAGCCCTCGCCTCAGAGGTGCAAG
AGGCAGAGGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069179-exon-scaffold_495-1491911889:113460..114274 | TCONS_00069179-exon-scaffold_495-1491911889:113460..114274 | Clytia hemisphaerica | exon |
| TCONS_00069179-exon-scaffold_495-1510915933:113460..114274 | TCONS_00069179-exon-scaffold_495-1510915933:113460..114274 | Clytia hemisphaerica | exon |
| TCONS_00069179-exon-scaffold_495-1575043694:113460..114274 | TCONS_00069179-exon-scaffold_495-1575043694:113460..114274 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_495 | supercontig | scaffold_495:113460..114274 . |
Blast
The following BLAST results are available for this feature:
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