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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069176 ID=TCONS_00069176|Name=TCONS_00069176|organism=Clytia hemisphaerica|type=transcript|length=1009bp
CTTGCAGTGGCCTCTTTCATGAAATCTGATTGGTGCAAAACGACGTCATA
ATAGAACGACCTTTGACTTTTCCTTTACCGTGGTCAAGTCTAATATGTTC
AATAATTTTATTATTAAGGTAATCTTTTTAAGTAAGATTGACCACGCAAT
AACAAATATTGCCGCGGAGGAAAGTAACCTCGCTGCTCGATTTCATTTTG
ACGTTTGAGAggagaaaagtaaaaaagtcaaaCATTTCTCTTACATCAAT
GTTTGCCAGCCAACTTGaccttttcaatttcaacatcCAAGAAAATTGAC
TGAAATAATGTTGTTCTACAGCCAACTGGTTTGTTGGGCAATGTACGATT
GCTGGATATTGGTTGATTATTGTTTTACCATGTGTTGGGGGTTTGCTTTT
ATTGATTGCATtgatttgttgttgttggtgtTGCTGTTGTCAAAATGAAA
GCAGCTCTTCAGAAGAACGATATCATCTCAAATCTTCACATagattgaaa
gaaaaagataaaaggtCTTCTTGGTATATAAATCCTGAAGAACCACAATC
TCGTTATGGACTTTATAATGACTCAACCACAAATTATAGTCGTTTTGATA
AATAATTGGATGATACTGTATTGTTTATATTTCTTATGATATGACCAAGG
AAATCTCTAACTAACTTAGAatttggtacctttatcttttaaatttttgt
gagGCTTTTCATAAATTCATAAACagcatagaccttttcgcctttccatc
cgccatattgaattgtatgcaaaaattatggtggccgaatttccgtggtg
aaattcccttagaaagtatgcaaaacatatgcaaaaagaaagtattaata
taaaacttacatgcataatatTGGCAtttattaaagtgtaatcttgtaga
agaaagaataaattttcttctcttgaaaactaaaaataattatattcgct
catctcttagaacaagcacttcaaaaatccataacattagacataaactc
aaactgaaa Run BLAST on NCBI transcript from alignment at scaffold_495:215981..217165- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069176 ID=TCONS_00069176|Name=TCONS_00069176|organism=Clytia hemisphaerica|type=transcript|length=1185bp|location=Sequence derived from alignment at scaffold_495:215981..217165- (Clytia hemisphaerica)
CTTGCAGTGGCCTCTTTCATGAAATCTGATTGGTGCAAAACGACGTCATA
ATAGAACGACCTTTGACTTTTCCTTTACCGTGGTCAAGTCTAATATGTTC
AATAATTTTATTATTAAGGTAATCTTTTTAAGTAAGATTGACCACGCAAT
AACAAATATTGCCGCGGAGGAAAGTAACCTCGCTGCTCGATTTCATTTTG
ACGTTTGAGAGGAGAAAAGTAAAAAAGTCAAACATTTCTCTTACATCAAT
GTTTGCCAGCCAACTTGACCTTTTCAATTTCAACATCCAAGAAAATTGAC
TGAAATAATGTATGTATCATTTATCATTGTTTTGATTGTGAACATTGTAC
CTTTCATTAGCTGTGAAACTTCAGAAGAAAGCTGTAATCAAGTGAACACA
ACATGTAGTGATTGCATAGACATTGAAGGTTGTTTTTGGTGTGGGGCAAC
AGAATCCTGTCATGCTTATAATACCATTCCAACAGGTTGTTCTACAGCCA
ACTGGTTTGTTGGGCAATGTACGATTGCTGGATATTGGTTGATTATTGTT
TTACCATGTGTTGGGGGTTTGCTTTTATTGATTGCATTGATTTGTTGTTG
TTGGTGTTGCTGTTGTCAAAATGAAAGCAGCTCTTCAGAAGAACGATATC
ATCTCAAATCTTCACATAGATTGAAAGAAAAAGATAAAAGGTCTTCTTGG
TATATAAATCCTGAAGAACCACAATCTCGTTATGGACTTTATAATGACTC
AACCACAAATTATAGTCGTTTTGATAAATAATTGGATGATACTGTATTGT
TTATATTTCTTATGATATGACCAAGGAAATCTCTAACTAACTTAGAATTT
GGTACCTTTATCTTTTAAATTTTTGTGAGGCTTTTCATAAATTCATAAAC
AGCATAGACCTTTTCGCCTTTCCATCCGCCATATTGAATTGTATGCAAAA
ATTATGGTGGCCGAATTTCCGTGGTGAAATTCCCTTAGAAAGTATGCAAA
ACATATGCAAAAAGAAAGTATTAATATAAAACTTACATGCATAATATTGG
CATTTATTAAAGTGTAATCTTGTAGAAGAAAGAATAAATTTTCTTCTCTT
GAAAACTAAAAATAATTATATTCGCTCATCTCTTAGAACAAGCACTTCAA
AAATCCATAACATTAGACATAAACTCAAACTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069176-exon-scaffold_495-1575043694:216857..217165 | TCONS_00069176-exon-scaffold_495-1575043694:216857..217165 | Clytia hemisphaerica | exon |
| TCONS_00069176-exon-scaffold_495-1575043694:215981..216680 | TCONS_00069176-exon-scaffold_495-1575043694:215981..216680 | Clytia hemisphaerica | exon |
| TCONS_00069176-exon-scaffold_495-1510915933:216857..217165 | TCONS_00069176-exon-scaffold_495-1510915933:216857..217165 | Clytia hemisphaerica | exon |
| TCONS_00069176-exon-scaffold_495-1510915933:215981..216680 | TCONS_00069176-exon-scaffold_495-1510915933:215981..216680 | Clytia hemisphaerica | exon |
| TCONS_00069176-exon-scaffold_495-1491911889:216857..217165 | TCONS_00069176-exon-scaffold_495-1491911889:216857..217165 | Clytia hemisphaerica | exon |
| TCONS_00069176-exon-scaffold_495-1491911889:215981..216680 | TCONS_00069176-exon-scaffold_495-1491911889:215981..216680 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_495 | supercontig | scaffold_495:215981..217165 - |
Blast
The following BLAST results are available for this feature:
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