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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069146 ID=TCONS_00069146|Name=TCONS_00069146|organism=Clytia hemisphaerica|type=transcript|length=1553bp
GTAGATACATACAAAAAAAGTACACCACGTACACACATCACATCCCACCC
ACCCAATTTCGGGCACGTGAAGGCTTAATTTACGCTATGATGGATGCAAG
AGAATACCCTGCTATGCTGATGCTGATGGCAACCTCGTCCGTCcctgtgt
atcccaggctttatttacgccTACGCTACTTACTTATGGACGCCAAAGAA
TACACTgtcctggtgttggctgatgcgagttccctcTCTCCTCAGAgggg
ggaacttctcaaaacaaatgaaatctgacgttttgtttttgaatttacgc
gttcgaaaaccagccaatgccgCCAGGGTATTAATCTAGCGCTATCAGGC
AGTAACAGTAAGCCCTAAAAGCTTATATAATATAAAAGATATTATGATAC
GCAgggcagggaacgaggttgtgcTGATGGCTCATGCGACTTTTAAATAA
ATACAATACGTCATCCGACGCCTTGCGTTTCTTATGGTGTGTACGATGAG
AGCCCACCATATGTTGCGTTCAGACCTTTATTTAAGTATAATACGGTTGG
TTGATACTATTACTAATGAATAGACGCCAGAGAGAAAAGTATTGTAAGTA
GGCTGCTAATGATGCTACCCCCTCTCTCTCAGAGAGGGGAACTTTTTAAA
ACACAATACGTTATAAAAAACGAACGTTAAAAATATGAAGGAAAGTAGAA
TGCGCTATCCTACCGCATTCATGCATCATGCATACTACACACACTTATTA
TCGATCATcaatatgaaataaaataaacgaATTTTTAATCCGATATTTTG
CCTTCTTTGATTTAAGTATAGCCGCAATCTTTACTTTACTGAATTTCTTC
TACCATCATGACCAACCACTCAACTCAAGTCAAATCCACTAGGACTAGGA
GAGCAACACATCAATAAAAAACCTGTAGCTGTAATATTTTATATGATAGA
TGGGGAACAAAGTTGACCGGGCAAACGTGAAAATAAAACACCAAAATCAT
ATTCGTATTTTTCCCAACCAATCGCAATTCTATTCCAGAGCGCAATCAAC
ACAGGACAGAGAAAAGTACAATGCattgatttgatattttttattcgcGT
CATTGAAATACAACTCAAAAGTCATCACATTCTtcttgacacatgcgcga
ttgaatttttaatttttttacaaacaatTGGTCATCACAggttaatattt
tattttgaaaactcgGCCTCTGATGCGATGATACTCAGGGTGGTAAACCA
GGCcttttattttataataaaTGAGCGTTCATcatatgatgaaaaaaaaa
cgcACAGACGGCCTTTGAGTCTTCTACCTACCTACCGTACCAGAAAGTTG
TCAGCGAAAGAAAATATTCAGCAGATTTAGTAGATAGGGGCCACGGGGCA
GGTAAGGTTAGTTCTTTAGCAAATTCCGTCCACTGCCTTGCTTactttta
gttttttagtgCAAGAAACACCAGGAGAGAGGAGACTCGAGGAGAGTGAT
GGTGTGAAGCCCAGCGAAGAAAGATTTAGTCGTTGGGTAATATCATATCA
TTT Run BLAST on NCBI transcript from alignment at scaffold_494:46807..48359 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069146 ID=TCONS_00069146|Name=TCONS_00069146|organism=Clytia hemisphaerica|type=transcript|length=1553bp|location=Sequence derived from alignment at scaffold_494:46807..48359 (Clytia hemisphaerica)
AAATGATATGATATTACCCAACGACTAAATCTTTCTTCGCTGGGCTTCAC
ACCATCACTCTCCTCGAGTCTCCTCTCTCCTGGTGTTTCTTGcactaaaa
aactaaaagtAAGCAAGGCAGTGGACGGAATTTGCTAAAGAACTAACCTT
ACCTGCCCCGTGGCCCCTATCTACTAAATCTGCTGAATATTTTCTTTCGC
TGACAACTTTCTGGTACGGTAGGTAGGTAGAAGACTCAAAGGCCGTCTGT
gcgtttttttttcatcatatgATGAACGCTCAtttattataaaataaaag
GCCTGGTTTACCACCCTGAGTATCATCGCATCAGAGGCcgagttttcaaa
ataaaatattaaccTGTGATGACCAattgtttgtaaaaaaattaaaaatt
caatcgcgcatgtgtcaagaAGAATGTGATGACTTTTGAGTTGTATTTCA
ATGACgcgaataaaaaatatcaaatcaatGCATTGTACTTTTCTCTGTCC
TGTGTTGATTGCGCTCTGGAATAGAATTGCGATTGGTTGGGAAAAATACG
AATATGATTTTGGTGTTTTATTTTCACGTTTGCCCGGTCAACTTTGTTCC
CCATCTATCATATAAAATATTACAGCTACAGGTTTTTTATTGATGTGTTG
CTCTCCTAGTCCTAGTGGATTTGACTTGAGTTGAGTGGTTGGTCATGATG
GTAGAAGAAATTCAGTAAAGTAAAGATTGCGGCTATACTTAAATCAAAGA
AGGCAAAATATCGGATTAAAAATtcgtttattttatttcatattgATGAT
CGATAATAAGTGTGTGTAGTATGCATGATGCATGAATGCGGTAGGATAGC
GCATTCTACTTTCCTTCATATTTTTAACGTTCGTTTTTTATAACGTATTG
TGTTTTAAAAAGTTCCCCTCTCTGAGAGAGAGGGGGTAGCATCATTAGCA
GCCTACTTACAATACTTTTCTCTCTGGCGTCTATTCATTAGTAATAGTAT
CAACCAACCGTATTATACTTAAATAAAGGTCTGAACGCAACATATGGTGG
GCTCTCATCGTACACACCATAAGAAACGCAAGGCGTCGGATGACGTATTG
TATTTATTTAAAAGTCGCATGAGCCATCAgcacaacctcgttccctgccc
TGCGTATCATAATATCTTTTATATTATATAAGCTTTTAGGGCTTACTGTT
ACTGCCTGATAGCGCTAGATTAATACCCTGGcggcattggctggttttcg
aacgcgtaaattcaaaaacaaaacgtcagatttcatttgttttgagaagt
tccccccTCTGAGGAGAgagggaactcgcatcagccaacaccaggacAGT
GTATTCTTTGGCGTCCATAAGTAAGTAGCGTAggcgtaaataaagcctgg
gatacacaggGACGGACGAGGTTGCCATCAGCATCAGCATAGCAGGGTAT
TCTCTTGCATCCATCATAGCGTAAATTAAGCCTTCACGTGCCCGAAATTG
GGTGGGTGGGATGTGATGTGTGTACGTGGTGTACTTTTTTTGTATGTATC
TAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069146-exon-scaffold_494-1491911889:46807..48359 | TCONS_00069146-exon-scaffold_494-1491911889:46807..48359 | Clytia hemisphaerica | exon |
| TCONS_00069146-exon-scaffold_494-1510915933:46807..48359 | TCONS_00069146-exon-scaffold_494-1510915933:46807..48359 | Clytia hemisphaerica | exon |
| TCONS_00069146-exon-scaffold_494-1575043694:46807..48359 | TCONS_00069146-exon-scaffold_494-1575043694:46807..48359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_494 | supercontig | scaffold_494:46807..48359 . |
Blast
The following BLAST results are available for this feature:
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