TCONS_00069145 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069145
Unique NameTCONS_00069145
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length343

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069145 ID=TCONS_00069145|Name=TCONS_00069145|organism=Clytia hemisphaerica|type=transcript|length=343bp
TGATGACcctttaaatctgttttttcattttcataagaCGACAAAAAGTG
AAGGCGTTTCGCCTTTTTTGGTCGGGCGTGGGCGGAATTGTGCACAGTTG
ATGATTGTCATCCGATCGGGTTAAGTTTGGTTTTCCGATCTGTGTATTTG
CTCTTCAGCTTTTTTCGGGTAGCGTTCCGGTTGGGATACGCTTTCAATTC
ATCCAATCGGGCTAAGTTTGGTTTCCCGATATGTGTCgaaaacaattcaa
tatggctgccaaaGCGGTGCTTTTTCGTTCGTTCTGTGTTTATCTCTTGC
CAGCTTTTATTTATACAATCATTATATCTTGTTGAAATGGCTN
Run BLAST on NCBI

transcript from alignment at scaffold_494:14063..14405

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069145 ID=TCONS_00069145|Name=TCONS_00069145|organism=Clytia hemisphaerica|type=transcript|length=343bp|location=Sequence derived from alignment at scaffold_494:14063..14405 (Clytia hemisphaerica)
NAGCCATTTCAACAAGATATAATGATTGTATAAATAAAAGCTGGCAAGAG
ATAAACACAGAACGAACGAAAAAGCACCGCtttggcagccatattgaatt
gttttcGACACATATCGGGAAACCAAACTTAGCCCGATTGGATGAATTGA
AAGCGTATCCCAACCGGAACGCTACCCGAAAAAAGCTGAAGAGCAAATAC
ACAGATCGGAAAACCAAACTTAACCCGATCGGATGACAATCATCAACTGT
GCACAATTCCGCCCACGCCCGACCAAAAAAGGCGAAACGCCTTCACTTTT
TGTCGtcttatgaaaatgaaaaaacagatttaaaggGTCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043097XLOC_043097Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069145-exon-scaffold_494-1491911889:14063..14405TCONS_00069145-exon-scaffold_494-1491911889:14063..14405Clytia hemisphaericaexon
TCONS_00069145-exon-scaffold_494-1510915933:14063..14405TCONS_00069145-exon-scaffold_494-1510915933:14063..14405Clytia hemisphaericaexon
TCONS_00069145-exon-scaffold_494-1575043694:14063..14405TCONS_00069145-exon-scaffold_494-1575043694:14063..14405Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_494supercontigscaffold_494:14063..14405 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.52429	1.56436	4.46654	4.04953	0.739564	0.564277	0.680777	1.59334	0.936674	2.00124	1.16837	0.988204	0.75242	0.949604	2.66429	2.01081	1.60405	1.45126	1.68866	0.738567	2.27703	1.04579	0.957196	0.464685	0.852777	0.596631	0	0.578717	0.446113	2.26937
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069145 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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