TCONS_00069128 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069128
Unique NameTCONS_00069128
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length366

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069128 ID=TCONS_00069128|Name=TCONS_00069128|organism=Clytia hemisphaerica|type=transcript|length=366bp
AAATGTAATGGTTCACACTCCCCatgaaaaaattcttataataaaatatg
ttttgataCTGAATAATAATATTCATGTCAACAGCGTCATTTTTGCAGAC
CTTGACATTTTTGTTAAATGACGACGTCAAGTGCCTGTGACGTATAATGA
CGAATTTTTGGCTGACTTACGCATATTGCGTATCAACATTGAAATAGGAC
CAAAAACACGGCACTTGACGTGGATTATAAAAACACCCACATAGGTTTAA
ATAAGTGATTTGCGTTTTTCGAGGGTCGGCAAAACTGTGAGAAATTTCTA
ATTTAGTAGAGATTTAACTGAAGAGACACttgaaaaacattattttgaaC
GTGACTTAAGGAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_493:405986..406351

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069128 ID=TCONS_00069128|Name=TCONS_00069128|organism=Clytia hemisphaerica|type=transcript|length=366bp|location=Sequence derived from alignment at scaffold_493:405986..406351 (Clytia hemisphaerica)
TTTCTCCTTAAGTCACGttcaaaataatgtttttcaaGTGTCTCTTCAGT
TAAATCTCTACTAAATTAGAAATTTCTCACAGTTTTGCCGACCCTCGAAA
AACGCAAATCACTTATTTAAACCTATGTGGGTGTTTTTATAATCCACGTC
AAGTGCCGTGTTTTTGGTCCTATTTCAATGTTGATACGCAATATGCGTAA
GTCAGCCAAAAATTCGTCATTATACGTCACAGGCACTTGACGTCGTCATT
TAACAAAAATGTCAAGGTCTGCAAAAATGACGCTGTTGACATGAATATTA
TTATTCAGtatcaaaacatattttattataagaattttttcatGGGGAGT
GTGAACCATTACATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043087XLOC_043087Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069128-exon-scaffold_493-1491911889:405986..406351TCONS_00069128-exon-scaffold_493-1491911889:405986..406351Clytia hemisphaericaexon
TCONS_00069128-exon-scaffold_493-1510915933:405986..406351TCONS_00069128-exon-scaffold_493-1510915933:405986..406351Clytia hemisphaericaexon
TCONS_00069128-exon-scaffold_493-1575043694:405986..406351TCONS_00069128-exon-scaffold_493-1575043694:405986..406351Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:405986..406351 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.290524	0.271985	0.190423	0	0	0.752483	0.60115	0.31215	0.128315	0	0	0.347745	0.720642	0.251367	0.436967	1.59853	0	0.471112	0.485234	0	0.309854	0	2.50812	3.83307
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069128 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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