TCONS_00069115 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069115
Unique NameTCONS_00069115
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069115 ID=TCONS_00069115|Name=TCONS_00069115|organism=Clytia hemisphaerica|type=transcript|length=317bp
NTTCTTCACAGCAGCGTACCTCCTCAATCAGCCTCAAGGAATGTTACTGA
CCACAATCACTCAATATTCGATATGGCGTATGATCTTTTTCGTAAAAGTG
TTACTCAAATAGTCAAACAGTATTGGCTGACAAtgtgacaaaaaaaatca
ttgtttggcAACAATACCCGCTGAATGTTAAGTTTAACCATGACATAATT
CCAATAAAATCATAGggtctaaaaagttaaaatatttcaaaatccgAATG
TTGTTTTATAAATCTGATTTGGCTGttgcagatatttggtttgatcaagc
aataaaaatagttttcc
Run BLAST on NCBI

transcript from alignment at scaffold_493:136765..137081

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069115 ID=TCONS_00069115|Name=TCONS_00069115|organism=Clytia hemisphaerica|type=transcript|length=317bp|location=Sequence derived from alignment at scaffold_493:136765..137081 (Clytia hemisphaerica)
ggaaaactatttttattgcttgatcaaaccaaatatctgcaaCAGCCAAA
TCAGATTTATAAAACAACATTcggattttgaaatattttaactttttaga
ccCTATGATTTTATTGGAATTATGTCATGGTTAAACTTAACATTCAGCGG
GTATTGTTgccaaacaatgattttttttgtcacaTTGTCAGCCAATACTG
TTTGACTATTTGAGTAACACTTTTACGAAAAAGATCATACGCCATATCGA
ATATTGAGTGATTGTGGTCAGTAACATTCCTTGAGGCTGATTGAGGAGGT
ACGCTGCTGTGAAGAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043074XLOC_043074Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069115-exon-scaffold_493-1491911889:136765..137081TCONS_00069115-exon-scaffold_493-1491911889:136765..137081Clytia hemisphaericaexon
TCONS_00069115-exon-scaffold_493-1510915933:136765..137081TCONS_00069115-exon-scaffold_493-1510915933:136765..137081Clytia hemisphaericaexon
TCONS_00069115-exon-scaffold_493-1575043694:136765..137081TCONS_00069115-exon-scaffold_493-1575043694:136765..137081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:136765..137081 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.688712	0.859311	1.85976	0	15.8796	13.0313	17.7469	9.66511	3.57637	0	5.61216	6.32919	2.54005	0	2.10539	0.639448	1.16277	0.78378	1.27777	0.663934	3.30864	2.8292	1.63859	2.31727	6.87753	14.2317	0	0	0.576738	0.494139
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069115 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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