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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069081 ID=TCONS_00069081|Name=TCONS_00069081|organism=Clytia hemisphaerica|type=transcript|length=825bp
TTATCCCCAATTCTTATATAATaacgatatttttttattgtactAATTCG
CCATTATTACAACGTGATTTATATATTATACTGATAccaaactgtttttt
ttttttaattctgaaaaagtGATTTTGTGAGATAACCGAACTCCGAAGTA
AAAAGGATCGAATTTCGAAATATATGAAATACACACTTTTCCCAGAATTT
TCCAGCCAGGCAATTATTTCACCCCTAGGACTAAATCTTTTTCGAGAGCA
TAAACTTTCACAATGACTTAGAGGAACAAATACTTCTTAAATAATTGGAT
TAaaacttttgtcttttgatTTATGAAGCTTTTAAACAGCCTAAAACTAG
CTTTCCCTGAAAGTTAGGCTGTGGAGACGGACTGTAAGAATTGCTGTTAC
TCCCAAGTGTGTAACAGTAAACCACTCATTGATAGTTTTCGATTTTCTGT
GCGGCTCCACTCTACTTTTGTGTGCGCGTTTAATAAAATCAGAATAATTC
TTTCATTAAGCTAAAAAGTTTGAAGTCTTAcatattttcgcaaaaaaaaa
accaaaactcATAATGagtcgcgaaagtttctgctcgtaGAAGTTTGTat
gattaaaatattttcataattcatatatttgtaattttttgtttacgaTT
TTAATAGCTTATTATCATAGATGCATGACggtaaattcttttttattcaa
aagcaCATACACATTTTGTAAGAATTTTTGAAGAGtttgaatattcttaa
atttttgagttgtTTTAATCATTTTGTAAGTATCTTTGtgtgatttctta
agaaattgggtgttttagagtctgc Run BLAST on NCBI transcript from alignment at scaffold_493:212202..213081+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069081 ID=TCONS_00069081|Name=TCONS_00069081|organism=Clytia hemisphaerica|type=transcript|length=880bp|location=Sequence derived from alignment at scaffold_493:212202..213081+ (Clytia hemisphaerica)
TTATCCCCAATTCTTATATAATaacgatatttttttattgtactAATTCG
CCATTATTACAACGTGATTTATATATTATACTGATAccaaactgtttttt
ttttttaattctgaaaaagtGATTTTGTGAGATAACCGAACTCCGAAGTA
AAAAGGATCGAATTTCGAAATATATGAAATACACACTTTTCCCAGAATTT
TCCAGCCAGGTNTCGATTTTCGAAATATATGAAATAGCCTCTTTTCCCAG
AATTTTCCAGCCAGGCAATTATTTCACCCCTAGGACTAAATCTTTTTCGA
GAGCATAAACTTTCACAATGACTTAGAGGAACAAATACTTCTTAAATAAT
TGGATTAaaacttttgtcttttgatTTATGAAGCTTTTAAACAGCCTAAA
ACTAGCTTTCCCTGAAAGTTAGGCTGTGGAGACGGACTGTAAGAATTGCT
GTTACTCCCAAGTGTGTAACAGTAAACCACTCATTGATAGTTTTCGATTT
TCTGTGCGGCTCCACTCTACTTTTGTGTGCGCGTTTAATAAAATCAGAAT
AATTCTTTCATTAAGCTAAAAAGTTTGAAGTCTTAcatattttcgcaaaa
aaaaaaccaaaactcATAATGagtcgcgaaagtttctgctcgtaGAAGTT
TGTatgattaaaatattttcataattcatatatttgtaattttttgttta
cgaTTTTAATAGCTTATTATCATAGATGCATGACggtaaattctttttta
ttcaaaagcaCATACACATTTTGTAAGAATTTTTGAAGAGtttgaatatt
cttaaatttttgagttgtTTTAATCATTTTGTAAGTATCTTTGtgtgatt
tcttaagaaattgggtgttttagagtctgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069081-exon-scaffold_493-1491911889:212202..212410 | TCONS_00069081-exon-scaffold_493-1491911889:212202..212410 | Clytia hemisphaerica | exon |
| TCONS_00069081-exon-scaffold_493-1510915933:212202..212410 | TCONS_00069081-exon-scaffold_493-1510915933:212202..212410 | Clytia hemisphaerica | exon |
| TCONS_00069081-exon-scaffold_493-1575043694:212202..212410 | TCONS_00069081-exon-scaffold_493-1575043694:212202..212410 | Clytia hemisphaerica | exon |
| TCONS_00069081-exon-scaffold_493-1491911889:212466..213081 | TCONS_00069081-exon-scaffold_493-1491911889:212466..213081 | Clytia hemisphaerica | exon |
| TCONS_00069081-exon-scaffold_493-1510915933:212466..213081 | TCONS_00069081-exon-scaffold_493-1510915933:212466..213081 | Clytia hemisphaerica | exon |
| TCONS_00069081-exon-scaffold_493-1575043694:212466..213081 | TCONS_00069081-exon-scaffold_493-1575043694:212466..213081 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_493 | supercontig | scaffold_493:212202..213081 + |
Blast
The following BLAST results are available for this feature:
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