TCONS_00069052 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069052
Unique NameTCONS_00069052
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069052 ID=TCONS_00069052|Name=TCONS_00069052|organism=Clytia hemisphaerica|type=transcript|length=244bp
GGGGTAGAGGGGGAGATAGTGGGGGAGTTCACAGCCTCAACACGTTCTCT
TCCAACTTGGCTCTAAATAAGATTCTATTTTCCATCACATGCCAGTTATC
AATTAGGTCCACACAAAAGTCAACCTCGTCTGAATGATCTGCAACTAAAG
ACTTAACATTTCGTTTGACATAATTTTTGTCGAGTAACACATGAACAATA
TCTAGATTCAAACAGTTCACCGTGCTGTTTGCTGTATGGGTAAA
Run BLAST on NCBI

transcript from alignment at scaffold_492:128778..129021

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069052 ID=TCONS_00069052|Name=TCONS_00069052|organism=Clytia hemisphaerica|type=transcript|length=244bp|location=Sequence derived from alignment at scaffold_492:128778..129021 (Clytia hemisphaerica)
TTTACCCATACAGCAAACAGCACGGTGAACTGTTTGAATCTAGATATTGT
TCATGTGTTACTCGACAAAAATTATGTCAAACGAAATGTTAAGTCTTTAG
TTGCAGATCATTCAGACGAGGTTGACTTTTGTGTGGACCTAATTGATAAC
TGGCATGTGATGGAAAATAGAATCTTATTTAGAGCCAAGTTGGAAGAGAA
CGTGTTGAGGCTGTGAACTCCCCCACTATCTCCCCCTCTACCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043038XLOC_043038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069052-exon-scaffold_492-1491911889:128778..129021TCONS_00069052-exon-scaffold_492-1491911889:128778..129021Clytia hemisphaericaexon
TCONS_00069052-exon-scaffold_492-1510915933:128778..129021TCONS_00069052-exon-scaffold_492-1510915933:128778..129021Clytia hemisphaericaexon
TCONS_00069052-exon-scaffold_492-1575043694:128778..129021TCONS_00069052-exon-scaffold_492-1575043694:128778..129021Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_492supercontigscaffold_492:128778..129021 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.529505	0	0.955033	1.8687	4.54993	2.69656	1.08443	2.03046	1.42157	0.880423	0	1.12351	0.560973	0.582576	0.478957	0	0	0.649008	0	0	1.63105	0	0	0.661058	3.62244	1.61647	1.15658	0	0	0.953839
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069052 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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