TCONS_00069032 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069032
Unique NameTCONS_00069032
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length750

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069032 ID=TCONS_00069032|Name=TCONS_00069032|organism=Clytia hemisphaerica|type=transcript|length=750bp
NTCAGATGCCAGTGTGGTCGGATTATAACCTGGGGCTTCAGACGTATACT
GCAAAGAGTTCTTGATTTGACTACTGACATTATTGACGACAAACTTAACA
CTGACAGAATCatattttctattaaaaaatcaagtgttttcatatcaaaa
tttaGGGGGTTGGGTTATTTGGCACTCAAAAACCAGTATATTTAGTTCTG
TGTTATCTTAGCTGCCCATCTCATCGTCAGATGCCAGTGTGGTCGGATTA
TAACCTGGGGCTTCAGGCATATACTGCAAATAGATCTTGGTTTGACTACT
GACATTTTTGACGACAACTTAACTGACATAATCATATTTTCCATGcaaaa
tcaagtgttttcaaatcaaaatttacttAGGGGGTTGGGCTATTTGGCAC
TCAAAAACCAGTATATTTAGTTTTGGGTTATCTTAGCTGCCCATCTCATC
GTCAGATGCCAGTATGGTCGGATTATAACCTGGGGCTTCAGACGTATACT
GCAAATAGATCTTGGTTTGACTACTGACATTATTGACAACAAACTTAACT
GACATAATCATATTTTCCATGcaaaatcaagtgttttcaaatcaaaattt
agggGGTTAGGCTATTTGGCACTCAAAAACCAGTATATTTAGTTTTGGGT
TATCTTACCTGCCCATCTCATCGTTAGATGCCAGTGTGGTCGGATTATAA
CCTGGGGCTTCAGACGTATACTGCAAAGAGTTCTTGATTTGACTACTGAN
Run BLAST on NCBI

transcript from alignment at scaffold_492:132260..133009+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069032 ID=TCONS_00069032|Name=TCONS_00069032|organism=Clytia hemisphaerica|type=transcript|length=750bp|location=Sequence derived from alignment at scaffold_492:132260..133009+ (Clytia hemisphaerica)
NTCAGATGCCAGTGTGGTCGGATTATAACCTGGGGCTTCAGACGTATACT
GCAAAGAGTTCTTGATTTGACTACTGACATTATTGACGACAAACTTAACA
CTGACAGAATCatattttctattaaaaaatcaagtgttttcatatcaaaa
tttaGGGGGTTGGGTTATTTGGCACTCAAAAACCAGTATATTTAGTTCTG
TGTTATCTTAGCTGCCCATCTCATCGTCAGATGCCAGTGTGGTCGGATTA
TAACCTGGGGCTTCAGGCATATACTGCAAATAGATCTTGGTTTGACTACT
GACATTTTTGACGACAACTTAACTGACATAATCATATTTTCCATGcaaaa
tcaagtgttttcaaatcaaaatttacttAGGGGGTTGGGCTATTTGGCAC
TCAAAAACCAGTATATTTAGTTTTGGGTTATCTTAGCTGCCCATCTCATC
GTCAGATGCCAGTATGGTCGGATTATAACCTGGGGCTTCAGACGTATACT
GCAAATAGATCTTGGTTTGACTACTGACATTATTGACAACAAACTTAACT
GACATAATCATATTTTCCATGcaaaatcaagtgttttcaaatcaaaattt
agggGGTTAGGCTATTTGGCACTCAAAAACCAGTATATTTAGTTTTGGGT
TATCTTACCTGCCCATCTCATCGTTAGATGCCAGTGTGGTCGGATTATAA
CCTGGGGCTTCAGACGTATACTGCAAAGAGTTCTTGATTTGACTACTGAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043019XLOC_043019Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069032-exon-scaffold_492-1491911889:132260..133009TCONS_00069032-exon-scaffold_492-1491911889:132260..133009Clytia hemisphaericaexon
TCONS_00069032-exon-scaffold_492-1510915933:132260..133009TCONS_00069032-exon-scaffold_492-1510915933:132260..133009Clytia hemisphaericaexon
TCONS_00069032-exon-scaffold_492-1575043694:132260..133009TCONS_00069032-exon-scaffold_492-1575043694:132260..133009Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_492supercontigscaffold_492:132260..133009 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.956706	0.989246	1.07214	0.607261	2.08251	1.4167	2.16346	2.32037	1.77861	1.74416	2.85187	1.77657	1.86435	3.01319	1.32424	0.941128	1.37576	0.991644	0	0.822598	2.23642	1.4719	0.109567	0.389342	6.68855	5.82184	0.376123	0.195915	0	0.330675
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069032 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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