TCONS_00069029 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069029
Unique NameTCONS_00069029
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069029 ID=TCONS_00069029|Name=TCONS_00069029|organism=Clytia hemisphaerica|type=transcript|length=316bp
AcattaaaaatcttcttttattCCTTTTCAAGGCTCAAacaagaaaattt
tcttcgtatATGTATTGCTCATATTCCTAGGTTTAACAAATTTGTTGGCT
TATTTAAGATAaactgttaattttttttcttctaaactTATATATTCAAA
TGTGAATAAgatatttttatatattataatacTCCTCGAGGTTTATATTT
TATACTCAATTTAATTTGTAAAGCTAGATTAAATGGTACTAGGCAGCTTA
CTTAGTATCAGTCTTCACAATATTGTCTCAGGTCGTTTTTATCTCTCAGA
GAAGTATTATGAGCGA
Run BLAST on NCBI

transcript from alignment at scaffold_491:435337..435652

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069029 ID=TCONS_00069029|Name=TCONS_00069029|organism=Clytia hemisphaerica|type=transcript|length=316bp|location=Sequence derived from alignment at scaffold_491:435337..435652 (Clytia hemisphaerica)
TCGCTCATAATACTTCTCTGAGAGATAAAAACGACCTGAGACAATATTGT
GAAGACTGATACTAAGTAAGCTGCCTAGTACCATTTAATCTAGCTTTACA
AATTAAATTGAGTATAAAATATAAACCTCGAGGAgtattataatatataa
aaatatcTTATTCACATTTGAATATATAagtttagaagaaaaaaaattaa
cagttTATCTTAAATAAGCCAACAAATTTGTTAAACCTAGGAATATGAGC
AATACATatacgaagaaaattttcttgtTTGAGCCTTGAAAAGGaataaa
agaagatttttaatgT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043017XLOC_043017Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069029-exon-scaffold_491-1491911889:435337..435652TCONS_00069029-exon-scaffold_491-1491911889:435337..435652Clytia hemisphaericaexon
TCONS_00069029-exon-scaffold_491-1510915933:435337..435652TCONS_00069029-exon-scaffold_491-1510915933:435337..435652Clytia hemisphaericaexon
TCONS_00069029-exon-scaffold_491-1575043694:435337..435652TCONS_00069029-exon-scaffold_491-1575043694:435337..435652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_491supercontigscaffold_491:435337..435652 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.994499	1.29306	1.12602	1.10164	2.23523	0	0	0	0.558697	1.03805	1.00756	2.42855	1.98423	3.4344	3.20002	2.02007	3.48398	3.57097	0	1.10626	6.73077	3.75204	3.04073	3.11002	1.77958	0.952941	2.72731	5.82132	4.04733	6.74769
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069029 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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