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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069014 ID=TCONS_00069014|Name=TCONS_00069014|organism=Clytia hemisphaerica|type=transcript|length=1671bp
AACCTGAGGCCTTAAAAGGGGCATGTGAGGCTAAATCAAGTCCGGATTAT
GACCAAAACAAACCAGTTGAATCTAAACCTtgataaaaaaacatatatca
gaCACTAATTCAATTGCATCTTGTCTCGTGCAGCACTAAAGCGCTCACTC
CAATTCTCCAATGGTATATTGGCGGCCACCCAAGCTACATACTCTAAAGC
TCTAGAAGAGTGGGCTAATTCAATGACACTCAAACTTATCGAACATTATT
GTAATTAAActaaggggccgtcgacaaacgattttccttttttttaacgg
cttctggccgtaagggatgggagggggtcactgcaatgccgttaaaaaag
ttaaaaaaaggaGAGTCTCatttacaaatttcatcagtccAAAAAGTAGA
AATATGTGAAGAAAGGCTAAAACCAAAGCAACCACACGACATTCACCTTA
TTCCCGGTCACCAATTAATGCTTCGACGAGAAAAANGTGAAGAAAGGCTA
AGACCAAAGCAACCACACGACATTCACCTTATTCCCGGTCACCAATTAAT
GCTTCGACGAGAAAAATGACTGGTCACGTGACGAAAAAAAGGAATGTCGT
TTGTCGACAATTGCAAacgcaattgaatattacccaggaattggccgttc
gattgagatttgattgcttTCATCAATTGCTTTCATCAACAGTATCGCAA
ATATTCTATTACCTTCAATtacatttgattggttcgaccGCAATTTTCGT
TCAAACTTGCTTGATTGACATCGTCTGTTTGTAGCTTTTTCTCCGCAGCa
gaacaaaaaaacataaacaaaacaaatacaGTTCTGTAACACTGATGAAT
TAATTTGAAACTGCAATACACTTTTTGCATGAACACAACAACGTACGAAA
TGATGAAAAGAAAATGGCAACTGACAATTCTTAAAGAACCCAGAAATTTA
TCTGCCTGTCCCAGCAGATATCGGCCGTATGTATTTAAAACACCCGCTGC
ACGTGAACAGAACAACCTTACGATGATAATTattaattcaaattatttca
tacCAAAATCAAATCAACTTCAAAATATAGTGATTTGCAACCCTGTCCAG
ACTGCCAGATTCGTTCACAGACAAAGCTAAAAAAAGGAACTTGACCAGAC
GATCttaatcgaacggaatcgacgatcgaaccaatcgaaccaaatcaaac
gcaatcgaccgattgaaattcaattgtcgaacgcaatcgaatctcaatca
aacgtcaaaattctgggtaatattaggtgccgtggtatagtggtagtcga
ccttggcttctgtgcaggaggccagggtacgattcccactcacgacagtt
cacttggcaagtgaacattccttcgcccgggtcaacccatgccatgtgag
gggaattgggtagtcagttcaaggtgctgacggtaCGCTCATTactaagc
gtctatagttgcgagaatgcctctaaagcctcctgcaactcaaccaaata
gaaatagatttcgaacgtcgattccgttcgattgagatcgtctggcttta
ttcttgcagcttcccaacatccaagctctcaaacatcacaagccgaatga
aattactttcgatttaccgtagaaattatgcgacgaacaatccgggggtt
aatgaatcgacgatcgaacgc Run BLAST on NCBI transcript from alignment at scaffold_491:35995..37665 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069014 ID=TCONS_00069014|Name=TCONS_00069014|organism=Clytia hemisphaerica|type=transcript|length=1671bp|location=Sequence derived from alignment at scaffold_491:35995..37665 (Clytia hemisphaerica)
gcgttcgatcgtcgattcattaacccccggattgttcgtcgcataatttc
tacggtaaatcgaaagtaatttcattcggcttgtgatgtttgagagcttg
gatgttgggaagctgcaagaataaagccagacgatctcaatcgaacggaa
tcgacgttcgaaatctatttctatttggttgagttgcaggaggctttaga
ggcattctcgcaactatagacgcttagtAATGAGCGtaccgtcagcacct
tgaactgactacccaattcccctcacatggcatgggttgacccgggcgaa
ggaatgttcacttgccaagtgaactgtcgtgagtgggaatcgtaccctgg
cctcctgcacagaagccaaggtcgactaccactataccacggcacctaat
attacccagaattttgacgtttgattgagattcgattgcgttcgacaatt
gaatttcaatcggtcgattgcgtttgatttggttcgattggttcgatcgt
cgattccgttcgattaaGATCGTCTGGTCAAGTTCCTTTTTTTAGCTTTG
TCTGTGAACGAATCTGGCAGTCTGGACAGGGTTGCAAATCACTATATTTT
GAAGTTGATTTGATTTTGgtatgaaataatttgaattaatAATTATCATC
GTAAGGTTGTTCTGTTCACGTGCAGCGGGTGTTTTAAATACATACGGCCG
ATATCTGCTGGGACAGGCAGATAAATTTCTGGGTTCTTTAAGAATTGTCA
GTTGCCATTTTCTTTTCATCATTTCGTACGTTGTTGTGTTCATGCAAAAA
GTGTATTGCAGTTTCAAATTAATTCATCAGTGTTACAGAACtgtatttgt
tttgtttatgtttttttgttctGCTGCGGAGAAAAAGCTACAAACAGACG
ATGTCAATCAAGCAAGTTTGAACGAAAATTGCggtcgaaccaatcaaatg
taATTGAAGGTAATAGAATATTTGCGATACTGTTGATGAAAGCAATTGAT
GAaagcaatcaaatctcaatcgaacggccaattcctgggtaatattcaat
tgcgtTTGCAATTGTCGACAAACGACATTCCTTTTTTTCGTCACGTGACC
AGTCATTTTTCTCGTCGAAGCATTAATTGGTGACCGGGAATAAGGTGAAT
GTCGTGTGGTTGCTTTGGTCTTAGCCTTTCTTCACNTTTTTCTCGTCGAA
GCATTAATTGGTGACCGGGAATAAGGTGAATGTCGTGTGGTTGCTTTGGT
TTTAGCCTTTCTTCACATATTTCTACTTTTTggactgatgaaatttgtaa
atGAGACTCtcctttttttaacttttttaacggcattgcagtgaccccct
cccatcccttacggccagaagccgttaaaaaaaaggaaaatcgtttgtcg
acggccccttagTTTAATTACAATAATGTTCGATAAGTTTGAGTGTCATT
GAATTAGCCCACTCTTCTAGAGCTTTAGAGTATGTAGCTTGGGTGGCCGC
CAATATACCATTGGAGAATTGGAGTGAGCGCTTTAGTGCTGCACGAGACA
AGATGCAATTGAATTAGTGtctgatatatgtttttttatcaAGGTTTAGA
TTCAACTGGTTTGTTTTGGTCATAATCCGGACTTGATTTAGCCTCACATG
CCCCTTTTAAGGCCTCAGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069014-exon-scaffold_491-1491911889:35995..37665 | TCONS_00069014-exon-scaffold_491-1491911889:35995..37665 | Clytia hemisphaerica | exon |
| TCONS_00069014-exon-scaffold_491-1510915933:35995..37665 | TCONS_00069014-exon-scaffold_491-1510915933:35995..37665 | Clytia hemisphaerica | exon |
| TCONS_00069014-exon-scaffold_491-1575043694:35995..37665 | TCONS_00069014-exon-scaffold_491-1575043694:35995..37665 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_491 | supercontig | scaffold_491:35995..37665 . |
Blast
The following BLAST results are available for this feature:
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