TCONS_00069012 (transcript) - C. hemisphaerica

Overview
NameTCONS_00069012
Unique NameTCONS_00069012
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00069012 ID=TCONS_00069012|Name=TCONS_00069012|organism=Clytia hemisphaerica|type=transcript|length=298bp
gTCCAGAAAGCATgctaaataaacaaactttttgaagagtgTTATATAGG
AACGATGTAAGTAaaggtttttataaagaaagtttCATCTGTTATCTATT
TGGTccttatgaagaaaaaaaatccggCCGGGTGACGACAAaccagaaac
aaaaatttttagggTCAGCCTGACGGTCGGCACAGCAGAGATTTGTGTGC
TAAATTTTTGTTCAGTTGGGACCAACAAAATTCTTTGAGCAAGCGAAGAT
ATAGCCATTGAACCCGACTGTTGTCAGCACATCAAAGGGCCACTACTA
Run BLAST on NCBI

transcript from alignment at scaffold_491:4421..4718

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00069012 ID=TCONS_00069012|Name=TCONS_00069012|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at scaffold_491:4421..4718 (Clytia hemisphaerica)
TAGTAGTGGCCCTTTGATGTGCTGACAACAGTCGGGTTCAATGGCTATAT
CTTCGCTTGCTCAAAGAATTTTGTTGGTCCCAACTGAACAAAAATTTAGC
ACACAAATCTCTGCTGTGCCGACCGTCAGGCTGAccctaaaaatttttgt
ttctggtTTGTCGTCACCCGGccggattttttttcttcataaggACCAAA
TAGATAACAGATGaaactttctttataaaaaccttTACTTACATCGTTCC
TATATAAcactcttcaaaaagtttgtttatttagcATGCTTTCTGGAc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043000XLOC_043000Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00069012-exon-scaffold_491-1491911889:4421..4718TCONS_00069012-exon-scaffold_491-1491911889:4421..4718Clytia hemisphaericaexon
TCONS_00069012-exon-scaffold_491-1510915933:4421..4718TCONS_00069012-exon-scaffold_491-1510915933:4421..4718Clytia hemisphaericaexon
TCONS_00069012-exon-scaffold_491-1575043694:4421..4718TCONS_00069012-exon-scaffold_491-1575043694:4421..4718Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_491supercontigscaffold_491:4421..4718 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.58142	1.5522	0.901126	1.76322	9.65949	6.78494	2.55805	9.10028	3.35333	1.24609	1.20949	3.18028	2.9112	1.09939	2.71153	2.42491	1.19492	1.83712	2.11507	5.31185	3.07797	3.37799	0	4.56292	4.6997	2.28784	1.63695	4.07632	3.9751	5.84999
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00069012 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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