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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068988 ID=TCONS_00068988|Name=TCONS_00068988|organism=Clytia hemisphaerica|type=transcript|length=2035bp
ATTTTCCCcttggaaaaatataaaaacacccgctggaaatttttctcggg
ttaccctctggaaatgttcgtcccccctgtatggatataaaatggaccGG
CCCAATGAGTGAGATCCAAGCAAGTAGGTTGAATGACCCGTCTCTGACAT
GAACGCAATTTTAATCTACGCCaagaaataaaagaaagacgAATCACATT
CATGCGAGTAATAACTAAATAGACTAGCCCAGTTCCACATGAGACTGAAA
GTTTTACGTCTGCCAGAGTTCTAATAAGTCCGAAGATTatacttgcttat
aaaaaaacaggtGCCTACTTTTGTCACTCTcatctttaattttattttca
aagaacaaatacaaattataaaacataaacaaaaaatcgATGAGAAAATG
GGCTGCTGCTGTTCCAAGACGTGTGGAGATAACTGCTGCGTGGAATGTAC
TCAAAAATGTGCAGTCGGTAGTTACCTGTGGAGAGGGAGAGCTCGAAATG
TTATCGCTGTCGTCACGTCGAGCAGGAAAGTCGAGAAACGGGGTAGCGGA
TGGGTTATTCTAACCAATGACGGGCACTTGTTTTATTACTTGGACGCGGA
CGGCGCTACGGAATGGTACGGCGCAAATGTTTACCTTGAGTTCGGTTCCA
CAATGTCGTACGTTTTCGATGTGCCACTAGGCCTGGTAACTAAGGTTGGG
TACGAGAAAATGATTGGTGATGACCGTGTGACGTCACAATCTTGGTTTCA
TGATTCGAAAGCAGTAGAGGGCGGTGAAAGTTATTTAGCGTTAAACATGA
CTTTCACTAACGGCGCTGAGTTGGTTTTGTACATTTGTATGCAAGGTGCG
TACGATTTATTGAATCTCATCCAGGAAATTCTGAGACATCAATCTAGCAC
GTCTCTTcccaaagatttcaaaattagtTATGTGGATTATAACATAAATA
GGAGTGTTTGCGTTCCAGCGCAAACTTTACAAGCACCAATTCTGTTTGGC
TTCACTAATACCAATCGTCGTGGAATGCCAACGAGTCGGCCAATCGTTTA
aacggtcgtggcttcttcgtacGGGTGACAGTAGATCTTGTATTTTTCTA
TCTTTGATCTGGAGTTTTCTGGAGTTTTCTGAACCTTTAGAATGTTTCTA
AGTTGGACTTTTAGAGTTCAATAACAAAAAACTACTTCTACTTTCACCCG
TACGAAGGAGTCAGCACCCGTTTAAACGGCGACTTTATTATGGAACCTTA
GAGGTTAGATTATGGTCgtgagttttttctttatattttaaatgaaCCTG
TAACTATGAATTATTGTGCTtgtaattattattatttatagaacgatggc
cgagtggtcatTTCTCAACCTGGAACCCAGTCCTTTAAgtcgtttttttt
tgtgattttgatagCGCTTGAAAAGGTTTCTATCATGTCCACCAGTAAAG
ACTAAGAGTGGTGCAAGTGGCTCTTGGTATGACTGTAGTCATTGCCCCAA
ACTAGGGGTTCACAGTTCGAATCCCCGTACCATCCAATGgcccgttcagt
tcatagatagcagAATCGGCTGGCCATGGaaccgtgaaaacaatcgaaag
actgttcAAAAACTCCTTAATTagtgggctatccacgtaagaTATCGACT
CTATTTTTACAGACAAAAATGTCTGCACGATGTCTTCATATCTATCTTCT
AAGCACAAACCAAGCTAAAAATTGACTTCCCCCCTcattttgtcggattt
tttaaacatcaattgtttcaattttttggtatttttttatcttttattcc
TTATCTTCTAGTAGAATTTAAATTGTATTGTGTCtttgtatttaaatttt
ttcatcgaatttggcacgtaaaaattatttctttataGTAAAGTGTTCTT
TCTACCTACGAGCCTCTGCATTTTAATGTAATATTTACTCTTAGGCAAAG
ACAAGGGGCAGGGTTTTGTTTTAAATAGCAATGGGCTTGTAATGTCTTTC
AAATAAGTTTAACAGCCGGGAAGTTAAGATCGGCA Run BLAST on NCBI transcript from alignment at scaffold_491:164283..166317- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068988 ID=TCONS_00068988|Name=TCONS_00068988|organism=Clytia hemisphaerica|type=transcript|length=2035bp|location=Sequence derived from alignment at scaffold_491:164283..166317- (Clytia hemisphaerica)
ATTTTCCCCTTGGAAAAATATAAAAACACCCGCTGGAAATTTTTCTCGGG
TTACCCTCTGGAAATGTTCGTCCCCCCTGTATGGATATAAAATGGACCGG
CCCAATGAGTGAGATCCAAGCAAGTAGGTTGAATGACCCGTCTCTGACAT
GAACGCAATTTTAATCTACGCCAAGAAATAAAAGAAAGACGAATCACATT
CATGCGAGTAATAACTAAATAGACTAGCCCAGTTCCACATGAGACTGAAA
GTTTTACGTCTGCCAGAGTTCTAATAAGTCCGAAGATTATACTTGCTTAT
AAAAAAACAGGTGCCTACTTTTGTCACTCTCATCTTTAATTTTATTTTCA
AAGAACAAATACAAATTATAAAACATAAACAAAAAATCGATGAGAAAATG
GGCTGCTGCTGTTCCAAGACGTGTGGAGATAACTGCTGCGTGGAATGTAC
TCAAAAATGTGCAGTCGGTAGTTACCTGTGGAGAGGGAGAGCTCGAAATG
TTATCGCTGTCGTCACGTCGAGCAGGAAAGTCGAGAAACGGGGTAGCGGA
TGGGTTATTCTAACCAATGACGGGCACTTGTTTTATTACTTGGACGCGGA
CGGCGCTACGGAATGGTACGGCGCAAATGTTTACCTTGAGTTCGGTTCCA
CAATGTCGTACGTTTTCGATGTGCCACTAGGCCTGGTAACTAAGGTTGGG
TACGAGAAAATGATTGGTGATGACCGTGTGACGTCACAATCTTGGTTTCA
TGATTCGAAAGCAGTAGAGGGCGGTGAAAGTTATTTAGCGTTAAACATGA
CTTTCACTAACGGCGCTGAGTTGGTTTTGTACATTTGTATGCAAGGTGCG
TACGATTTATTGAATCTCATCCAGGAAATTCTGAGACATCAATCTAGCAC
GTCTCTTCCCAAAGATTTCAAAATTAGTTATGTGGATTATAACATAAATA
GGAGTGTTTGCGTTCCAGCGCAAACTTTACAAGCACCAATTCTGTTTGGC
TTCACTAATACCAATCGTCGTGGAATGCCAACGAGTCGGCCAATCGTTTA
AACGGTCGTGGCTTCTTCGTACGGGTGACAGTAGATCTTGTATTTTTCTA
TCTTTGATCTGGAGTTTTCTGGAGTTTTCTGAACCTTTAGAATGTTTCTA
AGTTGGACTTTTAGAGTTCAATAACAAAAAACTACTTCTACTTTCACCCG
TACGAAGGAGTCAGCACCCGTTTAAACGGCGACTTTATTATGGAACCTTA
GAGGTTAGATTATGGTCGTGAGTTTTTTCTTTATATTTTAAATGAACCTG
TAACTATGAATTATTGTGCTTGTAATTATTATTATTTATAGAACGATGGC
CGAGTGGTCATTTCTCAACCTGGAACCCAGTCCTTTAAGTCGTTTTTTTT
TGTGATTTTGATAGCGCTTGAAAAGGTTTCTATCATGTCCACCAGTAAAG
ACTAAGAGTGGTGCAAGTGGCTCTTGGTATGACTGTAGTCATTGCCCCAA
ACTAGGGGTTCACAGTTCGAATCCCCGTACCATCCAATGGCCCGTTCAGT
TCATAGATAGCAGAATCGGCTGGCCATGGAACCGTGAAAACAATCGAAAG
ACTGTTCAAAAACTCCTTAATTAGTGGGCTATCCACGTAAGATATCGACT
CTATTTTTACAGACAAAAATGTCTGCACGATGTCTTCATATCTATCTTCT
AAGCACAAACCAAGCTAAAAATTGACTTCCCCCCTCATTTTGTCGGATTT
TTTAAACATCAATTGTTTCAATTTTTTGGTATTTTTTTATCTTTTATTCC
TTATCTTCTAGTAGAATTTAAATTGTATTGTGTCTTTGTATTTAAATTTT
TTCATCGAATTTGGCACGTAAAAATTATTTCTTTATAGTAAAGTGTTCTT
TCTACCTACGAGCCTCTGCATTTTAATGTAATATTTACTCTTAGGCAAAG
ACAAGGGGCAGGGTTTTGTTTTAAATAGCAATGGGCTTGTAATGTCTTTC
AAATAAGTTTAACAGCCGGGAAGTTAAGATCGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068988-exon-scaffold_491-1575043694:164283..166317 | TCONS_00068988-exon-scaffold_491-1575043694:164283..166317 | Clytia hemisphaerica | exon |
| TCONS_00068988-exon-scaffold_491-1510915933:164283..166317 | TCONS_00068988-exon-scaffold_491-1510915933:164283..166317 | Clytia hemisphaerica | exon |
| TCONS_00068988-exon-scaffold_491-1491911889:164283..166317 | TCONS_00068988-exon-scaffold_491-1491911889:164283..166317 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_491 | supercontig | scaffold_491:164283..166317 - |
Blast
The following BLAST results are available for this feature:
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