TCONS_00068974 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068974
Unique NameTCONS_00068974
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068974 ID=TCONS_00068974|Name=TCONS_00068974|organism=Clytia hemisphaerica|type=transcript|length=129bp
AGAAGACATTGTCTTGAATACCAAAATCACAATGCAAGGAGTTAATTTCG
AATTTCACAAGGACTATGATGTGCCAGCTAGGGCACAAATACGATGTTTT
GGTGCTTCAGAATTGTCAGCTATTCCGTT
Run BLAST on NCBI

transcript from alignment at scaffold_491:171945..172237+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068974 ID=TCONS_00068974|Name=TCONS_00068974|organism=Clytia hemisphaerica|type=transcript|length=293bp|location=Sequence derived from alignment at scaffold_491:171945..172237+ (Clytia hemisphaerica)
AGAAGACATTGTCTTGAATACCAAAATCACAATGCAAGGAGTTAATTTCG
AATTTCACAAGGACTATGATGTGCCAGCTAGGTAGGAAATAACAGTTAAG
TAGACTTAGAGTACTTGGTCgcaattttgaaagaaaaaaataaatataag
atTGGCCCTATCTAGTGATAAAAACATTACAATTCATTTTTaacttccaa
aaacaactaaaacctggtaaaaaatgaatttttcttttcaatcagGGCAC
AAATACGATGTTTTGGTGCTTCAGAATTGTCAGCTATTCCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042979XLOC_042979Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068974-exon-scaffold_491-1491911889:171945..172025TCONS_00068974-exon-scaffold_491-1491911889:171945..172025Clytia hemisphaericaexon
TCONS_00068974-exon-scaffold_491-1510915933:171945..172025TCONS_00068974-exon-scaffold_491-1510915933:171945..172025Clytia hemisphaericaexon
TCONS_00068974-exon-scaffold_491-1575043694:171945..172025TCONS_00068974-exon-scaffold_491-1575043694:171945..172025Clytia hemisphaericaexon
TCONS_00068974-exon-scaffold_491-1491911889:172190..172237TCONS_00068974-exon-scaffold_491-1491911889:172190..172237Clytia hemisphaericaexon
TCONS_00068974-exon-scaffold_491-1510915933:172190..172237TCONS_00068974-exon-scaffold_491-1510915933:172190..172237Clytia hemisphaericaexon
TCONS_00068974-exon-scaffold_491-1575043694:172190..172237TCONS_00068974-exon-scaffold_491-1575043694:172190..172237Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_491supercontigscaffold_491:171945..172237 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068974 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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