TCONS_00068944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068944
Unique NameTCONS_00068944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068944 ID=TCONS_00068944|Name=TCONS_00068944|organism=Clytia hemisphaerica|type=transcript|length=175bp
aatctatatattcgaaaatattggacagcaaagaagccaatcaaatgtcg
ctatttacgcaCGTCAGATAATAAACTGAAATATATAGTTTTTGGGCCCT
TTTTGTACTCTTTAACTATTACTGACTACTTGTACCTGTTTTTTATCATT
CTAGTGAAGCGGTAAAAGATTTAAA
Run BLAST on NCBI

transcript from alignment at scaffold_49:939226..939400

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068944 ID=TCONS_00068944|Name=TCONS_00068944|organism=Clytia hemisphaerica|type=transcript|length=175bp|location=Sequence derived from alignment at scaffold_49:939226..939400 (Clytia hemisphaerica)
TTTAAATCTTTTACCGCTTCACTAGAATGATAAAAAACAGGTACAAGTAG
TCAGTAATAGTTAAAGAGTACAAAAAGGGCCCAAAAACTATATATTTCAG
TTTATTATCTGACGtgcgtaaatagcgacatttgattggcttctttgctg
tccaatattttcgaatatatagatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042964XLOC_042964Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068944-exon-scaffold_49-1491911889:939226..939400TCONS_00068944-exon-scaffold_49-1491911889:939226..939400Clytia hemisphaericaexon
TCONS_00068944-exon-scaffold_49-1510915933:939226..939400TCONS_00068944-exon-scaffold_49-1510915933:939226..939400Clytia hemisphaericaexon
TCONS_00068944-exon-scaffold_49-1575043694:939226..939400TCONS_00068944-exon-scaffold_49-1575043694:939226..939400Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:939226..939400 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00068944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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