TCONS_00068900 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068900
Unique NameTCONS_00068900
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length962

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068900 ID=TCONS_00068900|Name=TCONS_00068900|organism=Clytia hemisphaerica|type=transcript|length=962bp
TTATaggaacattttgaaaataatcaataatACAATAAAGAGTTAATGGT
TGTATATCTAAAGACACCGATCTTGTTTTCATCCATCCTTCGCACTTGTA
CTTTCACAACTCTTAGAAGAATGGCTACTATTAATGATAAGatGGAAGGT
ATGAGACAGTCTTATGAAGTTGAAAGTTCAATTTCTGAAGATCTCACTGT
TAAGGATCCAATGGAATTGTTTAAAGTATGGTTTCAAAAGGCTGCCGAGC
ATCCTGATATTCTGGAACCTAACGCAATGACTATCGCTACTTGTTCGAAA
GACGGGTATCCAACATCGCGGTACGTTCTTCTAAAAGGATTAACAGAGAA
AGGATTCCGTTTCTTCACTAACTATGAAAGTCAAAAGGGAAAACAATTGA
TTGAAAACCCCAAGGCTTCGTTAACGTTCTACTGGGAGCCTATGCACATG
CAGGTTCGTATTTGTGGAGACGTTGAGAAATTACCTGAAGAAGATTCAAC
ATCTTATTTTCATAAGAGACCAAGAGAAAGTCAAATCGGTGCAGTTGTTA
GTCGACAAAGTCAACCCATTCCTAATCGAAAGtatTTAGAGGATTTGCGA
GAAGATATCATCAAGAAATACGAGGGCAAAGAAATCCCCAAACCTACATA
CTGggGAGGTTTTGTGATAACACCAGTGACAATGGAATTTTGGTGTGGGG
GCGTCGGGCGTTTACACGATCGAATCCGCTTCCGTATACCCGCCCTAAGC
GAAACCATAAACAGCGATCTAACCAAAGAAGGCGCCAATGGATGGGTGTA
TGAAAGATTGTCACCCTAATGCTTGCCACGATGGCTTCATGAGACAATTT
TTGGAGGATTTTAGATCCTGTTTGATTGAGCCCACACCATGTCAAGTACA
TGGCGTCCTCCTGCTTTTTGGTCCCCCCTAATAtgagctaaaatccccca
tctggccttTNN
Run BLAST on NCBI

transcript from alignment at scaffold_49:737299..746981-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068900 ID=TCONS_00068900|Name=TCONS_00068900|organism=Clytia hemisphaerica|type=transcript|length=9683bp|location=Sequence derived from alignment at scaffold_49:737299..746981- (Clytia hemisphaerica)
TTATAGGAACATTTTGAAAATAATCAATAATACAATAAAGAGTTAATGGT
TGTATATCTAAAGACACCGATCTTGTTTTCATCCATCCTTCGCACTTGTA
CTTTCACAACTCTTAGAAGAATGGCTACTATTAATGATAAGGTATGCTTT
TTTGTCTAATTTTGACTTTCTTCATTGTTCGACCATCCTATTCCCCTGAA
TAAAATATGGTGACCAATTCCCCCCAGGATAATCAGGAAGGGGAGATATC
AAGAAAGGAAGATCCTTCAGGAAGGGCCAGGATCAACATTAAGCCATAAC
CTTCTGGTCATAATTAAGTAGTTTATCTACTTTTTTTTTTTTAGGGAGAA
TATGCTCAAATTACAACGTATTTTCCATTTTTCATGGTAGTTTTAGACGT
TCTTTTCAATTCAGAACCCTTGGAAATATTTACACGTTTTTTTTCATAAA
AACATCTAATATTTTTGAAGCTTTCAGATGTTCTTAGCTTTTTGAGTTTT
AAGCCTAAAAATGTTCTTATTTTTTTGAGTGTTTTTTGTCCATTCTTCTA
AGAAAATAAGTGTTTTAAAGACCGCAAAATCTTAAAATGTTCCTAACTTG
TTCTTAGCCTTGTGTTCTTATATAGTTTGTTTTTATTATAACAGGACGTG
TAGGTAATTAATTGAAACTTTTATAAAACTATTTTTTTGTTGGTACTCTA
GTAGTTTACCAGCAATTCAAACTTTGCAAGTAATATGTAAGTTGAACAGA
AACATCTGGTGCTTGAAATTATAAAATGCATTGATCGAATATCATTTTAT
ATGATTTTTGATGATATTCACAAGGCTCATTTAAGAATATGGAACATAAA
AAGACGAAAATAAGGACCATTTTATTCCACATTAATTATTGATTATTATG
ATTTCAGCCACTCCTTTTCACTTTTTACTTATTTTGTTCACATTTTTTTT
TAAGTTCCTTTTTATTTTTGTCACTTAATAGAAGTTCGAATGACAACTAA
CCAATCAAAATATTCGAATTGCACAACTATGAAATCGATTACTTTTTGAA
AAAAGTCGTAAGGTTTTTTTGCTCTTTTCGTGAGATGATTACAGCAGGGC
TATTAACTGGCTCCTCCCTTACATTTTTAAGCTAAGCTTTTTTAAGCTTT
TTAAGCTATTCTTTTTAAGTAATTTAAAATCGGTTAAAAAATAAATTGGG
AAGCTAGTTTGATAATATCAGCTTTGAGACATCTACAGTATTCGTTGAAA
TTTTTAAAGTCGAAAATTAGTTCGTAAAATTTTATATTCACAAGTTTCAT
TTAATTTCATATAATTTCTCCAGAATAAAGAAAAAGATAAGTTAACTCCC
CCATTTAGCCAGAGATCTCTTACTAGCCTTACACTTCTGTGACCATCTAC
CAGAACTAAGCGTTGTCAGAGTAGACATTTGCATATAATCAACAAGAAAA
AATCTTATAGCTGGATGAAAACATCATGTTTCTATTCCTGGCTATGTTGA
TCATCTTTACCACGCATGACACAGAATCTGAAGCTAGAAATAATTCAAAA
AATGGAATGAATAGAATGATTCAGTATTTTTTGTCAAACTGTTCCAGTCA
CTAAGACAGAAACAATTCCATTTGGAGACGGATTGGTTACAGTGACTTAT
ACTGTATATAAAACAACTTGCACTCGTTATTAATGACACTATGTTACTGC
TTGCTTTTATGCTTTGGATTAAACAAGGGAAATTTTTGTCACAAATTTAT
TCAGCGATTGTTTATGTTTACGAAATATATATACAAAACGAAATTGATAA
AGGGGTTTGGAGTACTTTTTTACCTTATGTACTGTATGCGGTTCTTTTTG
GTTTCAAACTTGATGAAAATTAATATATAATTGCTTCAAAAACGAACACA
GGAATAGGAAAAAGAAAAGTAACCAAAAAAGAATAAATACAAGCACACCC
ATATAGCATTGGGCTATTCCAAAAAAATTGTACCCATTATATTGAGGAGG
TGTTTTTGGGAAAGGTGACCCCCTTGGATTTTTTTTCCTTATTTTTTGAA
CCACTCTGGAATTTTTGACCTCGTTTTACTGACCACTCTGGATTTTCAAC
CATTTTTACTGGCCAACCTGGATTTTCCAGCTCATTTTTCTGACCACACT
GGATTTTTACTCTTGAAAAACCAGACCACCCTGGATTTTTATTTTACTGA
CCACCCTTGACTTTTTATTTTACTGACCATCCTGGACGTCACACCTCCTT
AACATAGGGGACGGACAGACTATATCTGGAATAGCCCACTAGTTACTTAC
ACATCTCAAAGATTATTAACTTTAAAAAATTCTACCGATTAATCAAGATT
TTCCAAAAACTTATTTTCTGTAGTTTATGCCAAAAAACGTTTCACAATCT
ACGTCAAAATATATTGAGAATTTTGGTTATTTCCTCGTTTTTAGATATTT
GAAGTTCGGGCGAGAAAGTCACTTTTGGGGTATTAGTTGAATGTAATGGA
ATATTTCAATTTGGAAGGGGTTTAATGACTCCCAGGCCATATTCTGACCC
TTATTGGGCCATTCTTGAACTTTTGGATCCCGAGAATCTAAGTTCCTAAC
ATTTGAGTTATCATTTATAAAGACGCGACCCGTAGTGCAGTGGTAGAGCA
TCCGGCAACGATTCGCAAGGTTGTGGGTTTAACCCCCTCTTGGGTCATAC
CAAAGATTATCAAAATGGTACTTGATGCCTCTCTACTTGATGCTCAACAA
TTAAGAGAAGGATCAAGGGTAAGTGGAGCAATCCAGGGAGAAAGAGTGGC
GCCCTCCCCTACCTTCGGGTAGATAGCTATCGAAAGAGGAGCCTTCGGGT
CACCTCCTTATACTTACTTATAAAGAAACGACCCTTTTGGTATTTTTTTC
AATAGATGGAAGGTATGAGACAGTCTTATGAAGTTGAAAGTTCAATTTCT
GAAGATCTCACTGTTAAGGATCCAATGGAATTGTTTAAAGTATGGTTTCA
AAAGGCTGCCGAGCATCCTGATATTCTGGAACCTAACGCAATGACTATCG
CTACTTGTTCGAAGTAAGTTTCTTATTATGTTCATGTTGAAATGTTTGAA
TGGTGTTTTATAATTGTATCATCATAATCATGTCAAGAAATCTTGGTTTT
TTACCTTGTTTTAACATGAGGCTGGTACTAAAATATAATTTGTGGGTATT
CTAAAAGGGTTTTTTCTCTTTTCTAAGCTATGATAGGTCAACTTTTCGCC
CTGCCTTTTCTAATTGTGATTTAAAATGGGCAATAACTTTGCGTCTAATG
TCAATGCATTGCCCTTTTTGAATTCAATTCAATGGACTTCTTTCAATCTC
TTTCACACAAAGATTTTAATTACCAACTTTTTGCCCAGTTTTGCCCATTT
TTCACCTACTAAAACGATTAGAATAGACAGGACAAAAAGTCGTTTGTTTA
AAATAGAGCTAACACTAAACCTAAATTTTGGTATCATCCTGAAAAACTCA
ATATTTTGTTTCTTGTTCGCCCCCTAACAAAAAAGTTTCTAAAAGATTAT
AGGTAAAAGTCCAAAAATCTCAAAAACAGACGGCGGAGTGAGAATAATTT
TTGCGCTTCTTTCCAGAGACGGGTATCCAACATCGCGGTACGTTCTTCTA
AAAGGATTAACAGAGAAAGGATTCCGTTTCTTCACTAACTATGAAAGTCA
AAAGGGAAAACAATTGGTAAGGAAGTTAAATTTTTTTTTCCAATTCAAGT
ATGAAAACAAATGGGTACTCTTCTTTTTTTTAATACTTCATTTGCGATAG
GCTCTTGCTTATCCTCCAACGTAAAAGTTTCTTATAGAAAACATATCTAT
AGGGATCTGCGAATAAGAATAGGTTTGCGATAGGTCTATTTTGTTTTTCA
AATTGTCAAATCAATGTGAACGGCTTTTGGAAGTTTCAGAATGTTTTAAC
TGAAATCGGTTAGAATTTACCATCGGCGCCCGCTGACGTCTGTTTCTGGG
AGTTTATCAACGACAATTGCTTGATAATGAAATCAGTATTTTCAAAACTC
TTGATATCCCATTTTCCATCATCATACATCGGCATATCTAGAAGAAACCT
ATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAACAACGCCAACGTCATCAAGCATGATTCAATT
ATCAATAAAACTGATTTTTGCAACTGGAACTTTCTATTTCTTTTTTCCCT
ACTCTCCTTCCCTCTCCCCATCAACTATCAATGATAAAATTTAAGGCGTT
TTGCAATCTCGCTATAAACGCTATATTTTCTGACGTGATTGTTTTCATTT
TTCTCCTTATTGCTATCTAACTTTCATCATCAGGTAAGTCCATTCAGCAT
CTAGCTTGTTTTATCTTAATTCAATGAACTTCTCTCAACTCTTTCAAGCA
AAGATTTTAATTGCCAACTTTTTGCCCATTTTTCACCTACTAAAACAATT
AAAATAGGCAGGGCAACAAGTCGTTTGTCTAAAATAGAGCTAACACTAAA
CCTAAATTTTGGTATCATCCCGAAAAACTCAATATTTTGTTTCTTGTTCG
CCCCTAACAAAAAAGTTTCTAATAGATTATAGGTAAAAGTCCAAAAATCT
CAAAAACGGACGGCGGAGTGAGAATAATTTTTGCGCTTCTTTTCCAGAGA
CGGGTATCCAACATCGCGATACGTTCTTCTAAAAGGATTAACAGAGAAAG
GATTCCGTTTCTTCACTAACTATGAAAGTCAAAAGGGAAAACAATTGGTA
AGGAAGTTAAATTATTTTTTTTCCAATTCAAGTATGAAAACAAAAAATGG
GTACTCTTGTTTTTAATACTTCATTTGCGATAGGCTCTTGCTTATCCTCC
AACGTAAAAGTTTCTTATAGAAAACATATCTATAGGGATCTGCGAATAAG
AATAGGTTTGCGATAGGTCTATTTTGTTTTTCAAATTGTCAAATCAATGT
GAACGGCTTTTGGAAGTTTCAGAATGTTTTAACTGAAATCGGTTAGAATT
TACCATCGGCGCCCGCTGACGTCTGTTTCTGGGAGTTTATCAACGACAAT
TGCTTGATAATGAAATCAGTATTTTCAAAACTCTTGATATCCCATTTTCC
ATCATCATACATCGGCATATCTAGAAGAAACCTATCATCGCAAATGGAAT
CGGGTCGGGTTCGAGGATAGAATAACGTCAAATGTCGGAATCTGCGAGCA
TGTCAAAGCAACGTCTACGGGCATTTGACTTCATTTGGTACTGTAACCTT
AAACCCAATCCCTTTCTATGGAACTTTTGATGTAAGGATTAATGTGTTTT
ATGTTGTCTTTATACAAAACTATGTACTGAATCATCATCATCATCCTTCG
ATCAGAAACATAGAATAACTTTCCCTCAACAGCTCACTAAAGCTCAAGTA
CTAAATGAGCTTTATTATCTCTTCTCATTTATTTTTTATCTTTAACCTAC
GTTTCTTATTCTACCCCATTTAGCAGATAGTAATTTTATTTTAACAATTA
TTTTTCAGATTGAAAACCCCAAGGCTTCGTTAACGTTCTACTGGGAGCCT
ATGCACATGCAGGTTTGTTAATACGTATATTTATCATTTCGATTAATCTA
CGATAATCTAATTGTAGGGGTTCTGCTTGTACACGTTTTTTTATAAGAAT
AAACTATATCAGAACATAAGGCTTCGATGGCCAAAATGTTAAGAACAAGT
TAAGAACATTTTAAGGCTTTGCAGACTCTAGAACGTCGAATTTCATAGGA
AAATGAACAAAAATACTCAAAAAATGGCGAAAATGAGAACATAAGAACCT
TTTAGGCTTAAAACTCAAAAAGTTAAGAAAATCCCAATGCTTCAGAAATT
TTGGATGTTCTTATAAAAAAACGTGTAAAGCAAATGGTTCTCTGAAATTT
TTTCCAACGGATGATGCGTTTTATGGCTATTGTTCTAGTTAGATTCACTT
TTTAGGAGGAAGCAAACTTTTGTATCTAAAACTTGAAAACCGGGTTGGTC
AATCAAAATTAATACCAAAAACAGTTTTTAAAAAATCAACCGTTTCAAAA
CCGAAATCTTTTTAGATGCTTATCTTACCCACTTCCTTGTCAACGTAGAT
TATACAGTAATCAATGGTAATTAATTTGAGAATTCCTACTGAACTTATAA
GAACATTTTGTAGCATGGCTTCGATATACAGCTGACTCTCTCTAATTCCA
TTTACATGGGGAATCCAGAACGCATCGAATATTGGGCAGTCCCCATTACC
ATCCGATAAACACGAGTTAGTTGTAGTTACTAATTCGTGTTACATGGAGT
ATTATATACCACTTTCCAAAGGGACTTTCTAAGTTCGAATTAAAGAAAGA
TTCGAAATATACAGGTTCGGATTAAAGGGAGTAGACTGTATCACCTGACA
ACACACACATGAAAAATTGATTTTATTATCGCCCGTATTTTTGTTGTAGG
TTCGTATTTGTGGAGACGTTGAGAAATTACCTGAAGAAGATTCAACATCT
TATTTTCATAAGAGACCAAGAGAAAGTCAAATCGGTGCAGTTGTTAGTCG
ACAAAGTCAACCCATTCCTAATCGAAAGGTACACTTTTTATAAGTATTGC
GGTTATAAGCAAATCTAGGCTCAGATATGGCAAATATTTTTGAATTATAC
GCTGAGAATTACCTTGACCCTACACATTCCGATTCTAGCTGTTTTTGGAT
GAGATTTTACTGGTTGTCGGAATTTCCCTAAAATTTTGCTAAACATCCTT
CAAGCATTTTTCAGCCATATCAATCTCTCAATCTAAGCATCTCCGAGCCA
GTTTTTGGATTTATGTACTTTAGGCGTACAAACTTTCGCGAGGAGAAACT
TTCGCGATTTTCGCGAATTTTGGCCTTTTTTTAAAATTTATTCTTAACAG
GGCAATGAAAATGAAAAATGAAAAATTATTTCGTGTTTATGTCTTTACTT
GAATAACATAAACTTATTTTGGATCGTGACACTCTTAATTACTAAGGCTT
CAAAACAAACACACTCTTTTTCTTTTATAAGAACAATTTTATAAGAACAA
CGAGGCTCAAAAAAGTAGAGCAATTTTAGAACAATTCTCAGCCCGAAATA
GCTGAATTTTTATCAAATTAAGGGCTTCACTCTCAAAATAGGAAAAAAAT
CCTCAAACTCTATATATTAATACGCTAAAGCGTGTGTGTTACAACATTTT
GTAAAAAGTTTTCGAAAATCTAACAAAGCTCTACAAAGCCTCCTCTTCAT
GGCGTTGAACCATCATCTTTCCGCATCTTAGGCAGGTTCTCTACCACTAG
ACTAATTTTAGAGTGCCCAGATACGATTTTCTATGCAGGAAATTCGGAGC
TGGACGAGTTAAAATCATACTTCTTCCAATAAATTTTAACTTTCAGTTTT
CTTTTTCAATTTTGAAGAATTCTTATTCAAATATGCTCTTTAAAACTTTT
TGTCACATTGGTGGCTTCTTAATACTTTCAAAACTTTTCAAAGTAACCTT
CGAATGTCCAGCCACGATGGCTAGCTACGATGGCTAAAATGATCTAAAAT
GTATTTCTTCTAAGCCATTTACTTAATTGTGGTTCAAACTTGTAATACAA
TGTTATCTTTTTTTTCCTTAATCAATTTGTCCTTAAATCAAGGACAAAAT
ATGAATTGCCAAATTTATTTTTCAAGAAAGACATAAGAGCAATTAATTTT
CTGGCATTTGTTCATAAAATGAGACTCACATAATCATTCGGCGGCTATCT
TTCTTCCGTTAGAGTTTTTTATGTATAGTGATTCACTGGATTGCGACACA
CAGCGTGTGACGGTGCATAAGGCTAGTTAATCTTTAAATTAAGAACAGAA
TAAGAACAATTAGAGGCTTTAATAGCTAAAACAAAAAAAAAAGAAAGTCG
AGTTTTAACAAAAGTTCACTGGTTCTTACAAAAACAAAGAGTGTACATAA
TCATGTTCGCAATTCATGTGCTTTCTAGATTTAACTAGACATAATCTCGG
AGACTTTTAATCGATTCTATTTTGTGTGCAACTTATACGGACATCGTATA
CACGTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTTCGATGGC
CAAAACACTAAGAACAATTTAAAGACATTTTAAGGCTTTGCTCAAAACAC
CCAATTTATTGAATTTCCATTACAATATATTTTACACACTAGTTATTTCT
AAGGATCAAATTTGGACAAAGCTGAAAATTAATTCAAGAAATTGAAAAAT
TTAGAAAATCAAGCATTCCATACACTAAAATTTTATCATGATCTTCATCG
AAGATAAAAAAAGTGAATTTTTGAACTAGATATTTTTTGGAACACATTTT
CGGTTTTTTAACAACCCTGATAAATGAAAAATTTATTTTTATTTTACCGA
CCGACCGACCCATATTTTGCTAACGATCTGCCCGTAGATCAACAAATTAA
ATTGGTCTCGCCTTATAAAAGAACGTGTACCACGTGTTTCCAAAATTAAC
CTGAAGACTTCTTTTTCANACCTTATAAAAGAACGTGTACCACGTGTTTC
CAAAAATTAATCGAAGACTTCTTTTTCATTTTTTCAGTATTTAGAGGATT
TGCGAGAAGATATCATCAAGAAATACGAGGGCAAAGAAATCCCCAAACCT
ACATACTGGTAAATTAAAAATTCAAATTTCAAATCAGAATTAGCTTGTAC
AGAGGATACGATCTTCTTAACGAGGAGGCTCGCTGTGCAGACTTTGATTT
CTCATTTAGTGGTCAAATCACGGAAGAAAAACTAAGTCAGCGATATCCCA
GCTGCTACGTTGTTTTGACGTTTATCTAATGTTCAAAACGTCCATACATC
GTTAGATACGTTGAGACAACGTTATGTGGGATAAGAAAAATTTATAAGAA
TAATTAATACGAGGCTGATTTCTGGAAAAAAGCTAGGAACAAATTGAGAA
CAATCTGGCATTAGAAAATGAAAATGGACCAAACTTTCATGTTTCTTACA
ATAAAAAAAACTTTTTTCTTTTAGGGGAGGTTTTGTGATAACACCAGTGA
CAATGGAATTTTGGTGTGGGGGCGTCGGGCGTTTACACGATCGAATCCGC
TTCCGTATACCCGCCCTAAGCGAAACCATAAACAGCGATCTAACCAAAGA
AGGCGCCAATGGATGGGTGTATGAAAGATTGTCACCCTAATGCTTGCCAC
GATGGCTTCATGAGACAATTTTTGGAGGATTTTAGATCCTGTTTGATTGA
GCCCACACCATGTCAAGTACATGGCGTCCTCCTGCTTTTTGGTCCCCCCT
AATATGAGCTAAAATCCCCCATCTGGCCTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042929XLOC_042929Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068900-exon-scaffold_49-1575043694:746841..746981TCONS_00068900-exon-scaffold_49-1575043694:746841..746981Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:743919..744076TCONS_00068900-exon-scaffold_49-1575043694:743919..744076Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:743266..743365TCONS_00068900-exon-scaffold_49-1575043694:743266..743365Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:741070..741123TCONS_00068900-exon-scaffold_49-1575043694:741070..741123Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:740054..740182TCONS_00068900-exon-scaffold_49-1575043694:740054..740182Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:737974..738044TCONS_00068900-exon-scaffold_49-1575043694:737974..738044Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1575043694:737299..737607TCONS_00068900-exon-scaffold_49-1575043694:737299..737607Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:746841..746981TCONS_00068900-exon-scaffold_49-1510915933:746841..746981Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:743919..744076TCONS_00068900-exon-scaffold_49-1510915933:743919..744076Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:743266..743365TCONS_00068900-exon-scaffold_49-1510915933:743266..743365Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:741070..741123TCONS_00068900-exon-scaffold_49-1510915933:741070..741123Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:740054..740182TCONS_00068900-exon-scaffold_49-1510915933:740054..740182Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:737974..738044TCONS_00068900-exon-scaffold_49-1510915933:737974..738044Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1510915933:737299..737607TCONS_00068900-exon-scaffold_49-1510915933:737299..737607Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:746841..746981TCONS_00068900-exon-scaffold_49-1491911889:746841..746981Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:743919..744076TCONS_00068900-exon-scaffold_49-1491911889:743919..744076Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:743266..743365TCONS_00068900-exon-scaffold_49-1491911889:743266..743365Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:741070..741123TCONS_00068900-exon-scaffold_49-1491911889:741070..741123Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:740054..740182TCONS_00068900-exon-scaffold_49-1491911889:740054..740182Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:737974..738044TCONS_00068900-exon-scaffold_49-1491911889:737974..738044Clytia hemisphaericaexon
TCONS_00068900-exon-scaffold_49-1491911889:737299..737607TCONS_00068900-exon-scaffold_49-1491911889:737299..737607Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:737299..746981 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.1907	13.9454	6.66984	7.82276	0	0	0	0	3.81853	4.84569	7.43195	5.48597	7.45956	4.43424	3.75394	5.98643	8.30418	5.32016	0	3.36204	13.73	9.14493	7.27546	8.44583	3.07382e-08	0	2.8107	2.0128	4.93023	4.56416
Blast
[Close]
BLAST of TCONS_00068900 vs. Swiss-Prot (Human)
Match: PNPO (Pyridoxine-5'-phosphate oxidase OS=Homo sapiens GN=PNPO PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 7.622e-77
Identity = 117/226 (51.77%), Postives = 157/226 (69.47%), Query Frame = 1 
Query:  151 MRQSYEVESSISED--LTVKDPMELFKVWFQKAAEHPDILEPNAMTIATCSKDGYPTSRYVLLKGLTEKGFRFFTNYESQKGKQLIENPKASLTFYWEPMHMQVRICGDVEKLPEEDSTSYFHKRPRESQIGAVVSRQSQPIPNRKYLEDLREDIIKKYEGKEIPKPTYWGGFVITPVTMEFWCGGVGRLHDRIRFR--IPALSETINSDLTKEGANGWVYERLSP 816
            MR+SY  +    E+  LT  DP++ F  WF++A + PDI E NAM +ATC++DG P++R +LLKG  + GFRFFTN+ES+KGK+L  NP ASL FYWEP++ QVR+ G V+KLPEE++  YFH RP+ SQIGAVVS QS  IP+R+YL    E++ + Y+ +E+PKP  WGG+V+ P  MEFW G   RLHDRI FR  +P     +   +T  G   W+YERL+P
Sbjct:   37 MRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGP-MTHRGEEDWLYERLAP 261
The following BLAST results are available for this feature:
BLAST of TCONS_00068900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PNPO7.622e-7751.77Pyridoxine-5'-phosphate oxidase OS=Homo sapiens GN... [more]
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