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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068825 ID=TCONS_00068825|Name=TCONS_00068825|organism=Clytia hemisphaerica|type=transcript|length=740bp
CGTCTTTCTTTCGAGAACGTTTTGGTCATTCCAACCCGTCGGTGTTTGAA
ATTTATAgGTTGTGTACAAATGATGGATAAGAAGAAGTAGATGTTTATTT
ATCGAAAAGAAGAAAGAGTTCAGCGAGAATGAGCTACAAAAGATTTAGAG
GACACCTTCCTGAAGCAGAGATACTGAATGGACATTCGAAACCTGCTGTT
AAGACATACGGTGTTTTCCCCTTCAACACAATGAAACAAGAGAACGGGAA
GAAAAATACGGAAAATACGGAAATTATTTCAAGTGACAATCTTTTGTACC
GGAAAAAGAAGAGTAAGAAAGTTGGTCATTTTGGAACATTATATTTCATA
GCTGTAGATTAATTCTCTTAGATTTTGAAGATATATTTGATGAatattta
ttttgtaaatttacCCTATTTTCAATGAGACTCTTCAATGTTTGTAAAAA
GAAAGATGTAACTCCTTGAAATAAGACAGTCACAATTGTTTTTGTATCAA
TATTATCTGGAACTATTAATGTTATAACTTTCGATATTATTCGAGTCTGA
AGCGATtgtgtgctcgttgaaaagataatcaggATTGAAATAAGTATCat
caaatagaaaaaattcaaacaagtttggaaattgaagataaaaaatcaaG
GAGAAGAACAAAAGTAATTACTCTAGAATTGTACTAGTCCCGAATTTTCA
CATTCAATTCTAGAACGTTTATGAAAATTTCACTGAAAAC Run BLAST on NCBI transcript from alignment at scaffold_49:84505..85949- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068825 ID=TCONS_00068825|Name=TCONS_00068825|organism=Clytia hemisphaerica|type=transcript|length=1445bp|location=Sequence derived from alignment at scaffold_49:84505..85949- (Clytia hemisphaerica)
CGTCTTTCTTTCGAGAACGTTTTGGTCATTCCAACCCGTCGGTGTTTGAA
ATTTATAGGTAAAAACATTTTGTTGATCCAAGATTTGATACCATATAGTA
CCGTTCTGCCAACTAGAGTACTGAGCACTCTGGTGATCTTAAAGTTGAAT
TTTGTCTTTACCAGGAAAGCGCACGAATTTCTTGTATTGTCTGTAGGTTG
TCAGTCACCTGTTGATAAAATGTAAGCCTTTCTTTATCCATTTAAGTTTT
TATCAAGATGAGCTTTACGTTAATTGGATTACAATACTGTCGCTGTATAA
CGAAACAATTGCAGTTGCCAAAGAGATGTCCTGACTAAAGCCCTTTCACT
TCATAGCTCTTTGTTTTTATATTTGAAATTCTTGTTATACCTATTATTGT
TATACCTACTACATTATGGTGGTATCATGGTGCGGTATTGATCTCAAAAT
ATAGCGTTCAACATAAAAAAAGAAGTGATCTAATTAACAAATCACAACGC
ATCGACTGTAAAGCTTTTGATCTATCACCTCGCCAATCTCGTTCCCTGTG
TATTATCAGCTTTTTATGCTTACTGATTGCTCTAAATATTCTCTGGCATC
AATCAGTAACGTAAATAAAGCCTGGAATACACGGGAACGAGGTTGTCACC
TTCGAACATCCGCTTCTAAATCACTGGATCGCATGCTAGCATAGGGTATT
TTTCTTAAAAACTTTCGTGAACTACAAACTAAATGAGCTTCAATATTTCG
TCTATCGTTTCAGGTTGTGTACAAATGATGGATAAGAAGAAGTAGATGTT
TATTTATCGAAAAGAAGAAAGAGTTCAGCGAGAATGAGCTACAAAAGATT
TAGAGGACACCTTCCTGAAGCAGAGATACTGAATGGACATTCGAAACCTG
CTGTTAAGACATACGGTGTTTTCCCCTTCAACACAATGAAACAAGAGAAC
GGGAAGAAAAATACGGAAAATACGGAAATTATTTCAAGTGACAATCTTTT
GTACCGGAAAAAGAAGAGTAAGAAAGTTGGTCATTTTGGAACATTATATT
TCATAGCTGTAGATTAATTCTCTTAGATTTTGAAGATATATTTGATGAAT
ATTTATTTTGTAAATTTACCCTATTTTCAATGAGACTCTTCAATGTTTGT
AAAAAGAAAGATGTAACTCCTTGAAATAAGACAGTCACAATTGTTTTTGT
ATCAATATTATCTGGAACTATTAATGTTATAACTTTCGATATTATTCGAG
TCTGAAGCGATTGTGTGCTCGTTGAAAAGATAATCAGGATTGAAATAAGT
ATCATCAAATAGAAAAAATTCAAACAAGTTTGGAAATTGAAGATAAAAAA
TCAAGGAGAAGAACAAAAGTAATTACTCTAGAATTGTACTAGTCCCGAAT
TTTCACATTCAATTCTAGAACGTTTATGAAAATTTCACTGAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068825-exon-scaffold_49-1575043694:85892..85949 | TCONS_00068825-exon-scaffold_49-1575043694:85892..85949 | Clytia hemisphaerica | exon |
| TCONS_00068825-exon-scaffold_49-1575043694:84505..85186 | TCONS_00068825-exon-scaffold_49-1575043694:84505..85186 | Clytia hemisphaerica | exon |
| TCONS_00068825-exon-scaffold_49-1510915933:85892..85949 | TCONS_00068825-exon-scaffold_49-1510915933:85892..85949 | Clytia hemisphaerica | exon |
| TCONS_00068825-exon-scaffold_49-1510915933:84505..85186 | TCONS_00068825-exon-scaffold_49-1510915933:84505..85186 | Clytia hemisphaerica | exon |
| TCONS_00068825-exon-scaffold_49-1491911889:85892..85949 | TCONS_00068825-exon-scaffold_49-1491911889:85892..85949 | Clytia hemisphaerica | exon |
| TCONS_00068825-exon-scaffold_49-1491911889:84505..85186 | TCONS_00068825-exon-scaffold_49-1491911889:84505..85186 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_49 | supercontig | scaffold_49:84505..85949 - |
Blast
The following BLAST results are available for this feature:
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