TCONS_00068815 (transcript) - C. hemisphaerica

Overview
NameTCONS_00068815
Unique NameTCONS_00068815
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3038

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00068815 ID=TCONS_00068815|Name=TCONS_00068815|organism=Clytia hemisphaerica|type=transcript|length=3038bp
GTTGTACTATACTATTGGTAGCTTGTAGAAATGGGACTAAAACCTACCAA
AAAAGAAGGGGAAAATTTAAAGAATCAAGTGAAATATGGTACTGGAACAT
CTGATTGTTTGATTTGGGATGGCACTGTGGACGGGGGTGATGTCTTTACC
GGAAAATCACGATCGGTCAAAACACCAGTGATGTCTTTAGGATCGGATAT
TTTACCCGAGTACCAAGTGGAATCTCCAAAAATCCACCCATGGACAATTC
TCCATTACTCACCATTCAAAGCCATCTGGGATTGGGTGGTCTTATTTCTC
GTCATGTATACCGCCATTATCACGCCCTACATGGCCGCCTTCGTATTAAC
CAGAGATTCCAACGAGGAAACATTCGCGATGCATACATCTCATGCCGCTT
CTGCAATCACCATAGCTGATGATCCATTGGTCATCTTAGATTACATTGTT
GATGTCATGTTTATTATTGATATTTTCATCAACTTTCGAACGACTTTTGT
TGATGTACATGACGAGGTTGTCAGTGATCCTTGTTTAGTTGCTATCCATT
ATATGAAGGGATGGTTTGTCGTTGACTTGTTAGCTGCCATACCCTTTGAG
TTACTCATCATGATTGGAAATACTGATCAGACGACCACGTTGATCGGTTT
ACTGAAGACGGCGCGTTTGCTACGTTTGGTTCGCGTCGCACGGAAGCTAG
ACCGTTACTCAGAATACGGTACCGCCCTTCTCATGTTACTAATGTTTGGT
TTCGCCCTAGTGGCGCATTGGTTAGCCTGCGTGTGGTACGCCATTGGAAA
TTTTGAACGCCATCAAGTCCAAGAAATGGGATGGCTTTATAAGTTAGGTA
TCAATACAAATCAACCGTATAACCGGACAGATtctaacagtggaccggac
attcAAACCAAGTATTTGACAGCTCTGTATTTTACATTATCAAGCTTGAC
AAGTGTTGGGTTTGGGAATGTATCAGCAAACACCAATAGCGAGAAGATAT
TTACCATTGCTGTTATGCTAGTCGGAGCATTGATGCATGCGGTTATCTTT
GGTAACGTCACGGCAATCATACAACGTTTATATTCGGGTATGGCCCATTA
CCATTCCACCATGAGACGTGTCCGTGAATTCATACGTTTCTATCAGATAC
CGTCACCGTTGCGGCAACGGTTGGAAGATTATGCTCAATATGATTACTCC
TATACTAACGGTATTGATATGAACGAGGTTTTACGGAACTTTCCTGAAGG
TTTACAAGCAGACATTTCGTTACACTTAAACCGTCATCTTTTGTCCAACA
ACTTGGCGTTCCGTGGTTGCACTCCAGGTTGTTTGCGCTCGCTCTCCTTG
AAGTTCAATACAACACATTGTCCACCGGGTGATTACATCATTCACTATGG
TGACGAAATCAACAATTTGTACTGGATCGGCCGTGGTACGGTAGAAGTTA
TACAGTGTGATAGTATTATCGCTATACTTGGTAAAGAGGATTCATTTGGA
GAGAACTTTGGCCTGACATACAATCGAGTAACTGGCAAAGCAAAAGCCAG
TATACGAGCCTTGACTTATTGTGATTTACATTCCATTTCCAAAGAAAACC
TCATGCATATTATGGCAGCTTATCCAGAATTTCGAAAAACTTTCAATGTG
GATTTGCATATTACTTACGATTTGAGAGATTCACAGCTTGAAGAAAAAGA
TGTCAACAGCTCAATCTTCAATTCCTCACCATCATTCAACGCGCAACGTT
TCTCGAATAACGTACGTACTACGCCTTTCGATCGTCTATCGCCTAGTTAC
AACGGCTCACCTTGCCGGACGTGTACTAGCAGCGGCTTCACTAAATCAAC
TACGGAGTTTTCAAGCGATGAGCGACGTGCAAGTAGACCTTTATTAGACT
CGTTATCTGAAGAAGACCCATGCTCCTCCAGCAGTTGTCAAAGTCGCATG
ACTAAAAATAAATGTCCAACATCTAATAAAATAGTTGATAGTTCTTTTAT
CGCGACGTCACCAGTAGCTATACGAAGAGATACACATCTTTCAGCTACGT
CTCATCATAACGTTGCTGCAACGTCGTACCACGATGGATCTTGTACTTTA
GAACTGAGACGAGAAGTTGAAGAGATGAGAACCCATTTATTCCGTATTGA
AAGTCTTTTGAAACAAGACATGAAAAAAGTTGTCGATTTGTTAGAAGAGA
AAGTGACGTCAACATCTTCGACCACGCCCAATAAAACAAATAATGATagt
aataataacaataatactTCTATCAAGAACAACAATACCCATAATGCAAC
AGTAGTCAAAAATAACAATAACCATACTTCGATTCCATCTACAACGACAT
CCAATCACAACCATATCAAGGTTTTAACAACAGACAAAACTAAAATTAAT
TCTTCATCTTCAAACTCGAACAGGGTTAAGAACCAATAGCAATAAACATG
ATGTTTCGGGgacaaaagaaataaagaaaaaggaaataacCGAGACTTTT
TAGGTGATTCACGGCAAAAAGTTGCAGTCGTTTAATAATTCACAGTGAAT
AAAAGTTGACCTtctctaatttgacgttctactattctaTCCGCTagatt
attcgataatattgaaagtcaccgacAACGAAAAACTCTTATTAACGGTG
CTCTGTTATTCAAATCCAAATCCGATTCTTGAATTAGATTAGAATTGAAT
TAGAGAACGTCAAAAACTTTCCAATCTGGTGGCAGCTTTTTTACCGTAAA
TTCAAAAGTCACAgcatatttttggtttttcctgTAGAAATTTGTCAATA
TCTTTGATTTCAGTAAAGAGATAtttacgcttttttataagaatatactt
tataaaaatatttatgatgaaattggccaaaaatcaagaatatactaaga
atatcaccatcatggagtTTGGCAACCGAACTTAAGTCATCTTACCCCAG
TTTCACCGTgataaattttatgaattttgtgTATGATTCATTTTCTATAT
TGTCTATATTCCgaataaaaaaaacagtaaGTGCAGAA
Run BLAST on NCBI

transcript from alignment at scaffold_49:838338..845489+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00068815 ID=TCONS_00068815|Name=TCONS_00068815|organism=Clytia hemisphaerica|type=transcript|length=7152bp|location=Sequence derived from alignment at scaffold_49:838338..845489+ (Clytia hemisphaerica)
GTTGTACTATACTATTGGTAGCTTGTAGAAATGGGACTAAAACCTACCAA
AAAAGAAGGGGAAAATTTAAAGAATCAAGTGAAATATGGTACTGGAACAT
CTGATTGTTTGATTTGGGATGGCACTGTGGACGGGGGTGATGTCTTTACC
GGAAAATCACGATCGGTCAAAACACCAGTGAGCACTTATTGGTAACCTTC
GAAATGATTACATGGACATTAAGCTATAATTTAAAGGAAATTATTTAACG
TCTCCAATCTCCAACGATTGCCTTActcagcatttttaaacaaaaggaaG
TACAAGTTTCTCCCCTTTTAGAGCCGAGCGAGCTTAATATTtaagaaatt
attttgtttattatgttttgtcagcataaagaaATTGGCTCAAAGCGGAA
GGAAAACACATTAAATAGATTTTGTTCCTGAAGCGAGGTTTTTTAAAACC
CACAGAGTTGAAATATAAATATATCAAATCATGCTTGATTAATTGGTGAT
TTATTCTAACCAAGAAAACGTATTGTTTGCATCAGCAGAATTCCGAATCA
TAAAATTCTGGATGATTGTCTTTCTTATCATTATGTATGGTTTTATCATA
GATGTGCTCAAAAGTTGGCCTTACTAAAATCCGGTGTCTAGCCAACACAT
CCTCACACTTCTACTACCATACATACGTGTAGATATGTAAACATCCGAAA
ATCTACTATACTGGCAGTTACGGTAAATACTATATCTACCATTAcagtaa
aaataataatttagtAGATTTACGGATGTTTACATATGTATATACATATA
GTAGAAATAAGCGCGAGATTGGCCTTGTGTAGCCCGGCACGTCTATCTGA
CGTTACAGGTTTACAATTATTTTCAGTTTGTAGTATGACATCGATCTCTA
ATCGATAACAGTGTAACTTCATACAGTGTGTAccaaaaaaagcggacaaa
tttttacaTACAGTAATAATCTCCAAAACTCATCATCTTAACTTAGGGCT
TAAAATGTTTGTAATaggatttaaattctttgttCAATCAATAGGTACTA
TACTATAGGTATTCAATTTCCAAGAcgattgaataggtttttgagGTTGA
AATATTAAGTATTCAAGTCATAAAACTTTGTATAAATCATTAGGGTttta
ctttatttaaaaaatgtgtccgctttttttgggacacactatATATTGAA
GACTAACAGACTGCCCACCCATCATTcagaagtaaaaaataattaccttt
ttttatatacatttcAGGTGATGTCTTTAGGATCGGATATTTTACCCGAG
TACCAAGTGGAATCTCCAAAAATCCACCCATGGACAATTCTCCATTACTC
ACCATTCAAAGCCATCTGGGATTGGGTGGTCTTATTTCTCGTCATGTATA
CCGCCATTATCACGCCCTACATGGCCGCCTTCGTATTAACCAGAGATTCC
AACGAGGAAACATTCGCGATGCATACATCTCATGCCGCTTCTGCAATCAC
CATAGCTGATGATCCATTGGTCATCTTAGATTACATTGTTGATGTCATGT
TTATTATTGATATTTTCATCAACTTTCGAACGACTTTTGTTGATGTACAT
GACGAGGTTGTCAGTGATCCTTGTTTAGTTGCTATCCATTATATGAAGGG
ATGGTTTGTCGTTGACTTGTTAGCTGCCATACCCTTTGAGTTACTCATCA
TGATTGGAAATACTGATCAGGTATTAACAGTTTTTACATTGACTAATTTT
TACCTTCCATAAACTACTAAAAGTTGGAGGACTGTTTTACGTTCTGCTTA
AGCAAAGCATAAAATGATGGCTGCCATATTGATCTAGGCTATTTACTCGC
GCCTTCAAGTCTATCAAAAATGAACCCCGGGCTGATGTGCCCGATTAAAG
AGAGGAACGGATATTATGTTATAGAGTAAAATCCTCAAACCTCTTTTTAT
CTCATCTGGCTTTAGAATAATGGGTTAGAAAACCTATAAGAATCTAGAAT
TCCAGAAGGTCAGGCTGATCTAACAGGCTGCATACGTTACAAAGATTGAA
CTGAAccttttgaaaatatcttttctgCTTTCCTTTCAATGTtaagaaat
ttttactttattttatttattcataGACGACCACGTTGATCGGTTTACTG
AAGACGGCGCGTTTGCTACGTTTGGTTCGCGTCGCACGGAAGCTAGACCG
TTACTCAGAATACGGTACCGCCCTTCTCATGTTACTAATGTTTGGTTTCG
CCCTAGTGGCGCATTGGTTAGCCTGCGTGTGGTACGCCATTGGAAATTTT
GAACGCCATCAAGTCCAAGAAATGGGATGGCTTTATAAGTTAGGTATCAA
TACAAATCAACCGTATAACCGGACAGATtctaacagtggaccggacattc
AAACCAAGTATTTGACAGCTCTGTATTTTACATTATCAAGCTTGACAAGT
GTTGGGTTTGGGAATGTATCAGCAAACACCAATAGCGAGAAGATATTTAC
CATTGCTGTTATGCTAGTCGGAGGTTAGTATGTTAGTAATAACATTAAGT
TGAAGGTCTTTTTTAGGACGTGTGACAAAGTTTTAGCGCTGCGAAACCTA
CTTTTGTTTATGGTCTATTTCCATGTGCAAAGGGAAAGTTCACCACTTCC
TTCAATTCTATCGGCCTATTTGAATGAAGAGTGTATTTCAGACACATTTT
TGGGATTAGGTAAATGATTAGGACCCTTAAAAATTATTTGTAACATGGAT
AAAATCGTAGACGATTTCCAAGCGTCTGGTTTGAAGATCAAGGAATTTAA
CTTAACATTGCTTCATTATTAGTTCTATACTTAGTTCTTAGCAGTTAAAA
GAATTACCCATGAAAACAGAATACATCAGACTATTGAAATGGGAGCCATT
CGGTAATTCTCGGTGAGATTTACGTGGTCGCACATTACAGTTTTAAAGGT
TAGTCTGATGTATTCTGTTTTNATTTAACTTAACATTGCTTCATTATAGT
GACCTTTAAAACTGTAATGTGCGACCGCGTAAATCTCGCCGAGAATTACC
GAATGGCTCCCATTTCAATAGTCTGATGTATTCTGTTTCCATGGGTAATT
CTTTTAACTGCTAAGAATTATAAAGTAAAAGACCTTGGTAAGAACGGGTC
ATGGATTTGTTACGACCCTTTCTTGGTGGCCTGGTGGCgcatttcaaatt
tgaatcCAAACATAGGCATAGGGGTACAAAACCTTTTGTTTTCATCTCGT
CCGTGGTCGAAAGATgataagtctgcgaccgcagtcggagacgactaggg
gagggcgccactctttctccctggattgctcaacttacccttgatccttc
ttttaattgctgagcatcaaccagagaggcatcaagtaccattttaggaa
tctttggtatgacccggctggggttGAACCAACAACCTTGCGAaacgtag
ccggatgctctaccactgcactacggtcgaaAGATGATAGTGATGATGAT
CAATGGCGTATCGGATAGTTGAATGACTAGAGAGCTAACAAACCTAAAAC
TTCTACTTTCTACTTTCAGCATTGATGCATGCGGTTATCTTTGGTAACGT
CACGGCAATCATACAACGTTTATATTCGGGTATGGCCCATTACCATTCCA
CCATGAGACGTGTCCGTGAATTCATACGTTTCTATCAGATACCGTCACCG
TTGCGGCAACGGTTGGAAGATTATGCTCAATATGATTACTCCTATACTAA
CGGTATTGATATGAACGAGGTAAGCTATGCGATCGCCTTCTAGAATGACC
GACGCGCTCAACAACATTTGCCCAACACCCATTTCAATAGCCGGGTGGGA
GGTGGAGCACTATTATGTCTctatgaataatttttttaactgcTAAGTAT
ATTTGTTATTGAAATTTGTGGTGATAATGTCTCACAATACTCAAAGCATA
GTCCTTAAGCAattccaaaataattattttgagtttttttaaggtATACC
AGATTAAAATGGTTGCGTCATTTGCTAATGTAACATTTTTGGAAGTTGTG
TTTGAATCCGAACATAAGggtacaaaatctttttttttcagatcaTAAGA
GCCAGTAGAGTCattcagattttttttgtaattagaaTTTATTATTGAGG
TATTtctcaatagacgatatcggcttaacgtgaaaactcagatttgatcc
ccgaatattgcccacaatgctttgtgcggaaaaattttcaccgtgaactt
ttttccgcgcaaagcattgtgggcaatattcggggatcaaatctgagttt
tcacgttaagccgatatcgtctattaagaAGGTTCCACCTGGGTCTGTAA
TCACAGAAATGCTCAAATGGAATCTCTTTTTCTTTCCACTTATACAGGTT
TTACGGAACTTTCCTGAAGGTTTACAAGCAGACATTTCGTTACACTTAAA
CCGTCATCTTTTGTCCAACAACTTGGCGTTCCGTGGTTGCACTCCAGGTT
GTTTGCGCTCGCTCTCCTTGAAGTTCAATACAACACATTGTCCACCGGGT
GATTACATCATTCACTATGGTGACGAAATCAACAATTTGTACTGGATCGG
CCGTGGTACGGTAGAAGTTATACAGTGTGATAGTATTATCGCTATACTTG
GTAAGCAACTTACTATAGTCTAAAACCTTTTAAAGATCtaaagtttgcga
ccgcagtcgaagtagacctgaaggctcctctttcgatagctatctacccg
aaggtagcgGATGGCGCCACCCTTGCTCCCTGGATTGCTTCACATGCCCT
TGTTCCTTCCCTTAATTGCTGagtatcaagcagagaggcatcaagtacca
tttttgtacTAAATGCAATAAAATTTCTGGTGTAGAGCAGCGAGTTAACG
GCTCCGTTTTTCGATTGACAATTGTAGTGGAGTTCCAcgaattcgaactt
ctattattcgaatctttctctgataattcgaactaaaatattggtcccct
cagctagaaAGTTGCTTtaatactctctgtaattctgaatctttctctaa
ttcgaagaaaaattctcggtcccttgaagatcgagtTAGAGAGAAAGTTA
ACTGTATTTACATTGATGGATCGAAATTTTACATGTACCAAATTGTAGTT
TAAAACGCATTTAAAACATTTATTCTTAGGTAAAGAGGATTCATTTGGAG
AGAACTTTGGCCTGACATACAATCGAGTAACTGGCAAAGCAAAAGCCAGT
ATACGAGCCTTGACTTATTGTGATTTACATTCCATTTCCAAAGAAAACCT
CATGCATATTATGGCAGCTTATCCAGAATTTCGAAAAACTTTCAATGTGG
ATTTGCATATTACTTACGATTTGAGAGATTCACAGGTGATGGGATTTCAT
GTGTATCGTGGGATTGATTTGAACCCCgtttttttctcaacttcagttga
tgtagaatctgagaatgtctgtgtgtccTAAATCTAAAATGGTTgggttt
ggctgaaattttgcacacttattCCTCgggtgaataaatatttttagggt
gtttttttttcatttttcaaaatttttgatatttcggGCATGTGGAAAAG
TTTTCGTTAAAGTGAGACTAAAACTTTGGGTAacctggagactttaaaaa
tggttggatttggcttaaattttgcacactaTTATTTCATACCACTTGCT
TTAAAAAGTTGCGACCATTGTTAGGTTATTGCTTGACTTGACTTGTCAAT
TTCAAATAGTTTAGTGCATAACTTTGAACCATTTTTCTCTCGTTTCGTAG
CTTGAAGAAAAAGATGTCAACAGCTCAATCTTCAATTCCTCACCATCATT
CAACGCGCAACGTTTCTCGAATAACGTACGTACTACGCCTTTCGATCGTC
TATCGCCTAGTTACAACGGCTCACCTTGCCGGACGTGTACTAGCAGCGGC
TTCACTAAATCAACTACGGAGTTTTCAAGCGATGAGCGACGTGCAAGTAG
ACCTTTATTAGACTCGTTATCTGAAGAAGACCCATGCTCCTCCAGCAGTT
GTCAAAGTCGCATGACTAAAAATAAATGTCCAACATCTAATAAAATAGTT
GATAGTTCTTTTATCGCGACGTCACCAGTAGCTATACGAAGAGATACACA
TCTTTCAGCTACGTCTCATCATAACGTTGCTGCAACGTCGTACCACGATG
GATCTTGTACTTTAGAACTGAGACGAGAAGTTGAAGAGATGAGAACCCAT
TTATTCCGTATTGAAAGTCTTTTGAAACAAGACATGAAAAAAGTTGTCGA
TTTGTTAGAAGAGAAAGTGACGTCAACATCTTCGACCACGCCCAATAAAA
CAAATAATGATagtaataataacaataatactTCTATCAAGAACAACAAT
ACCCATAATGCAACAGTAGTCAAAAATAACAATAACCATACTTCGATTCC
ATCTACAACGACATCCAATCACAACCATATCAAGGTTTTAACAACAGACA
AAACTAAAATTAATTCTTCATCTTCAAACTCGAACAGGGTTAAGAACCAA
TAGCAATAAACATGATGTTTCGGGgacaaaagaaataaagaaaaaggaaa
taacCGAGACTTTTTAGGTGATTCACGGCAAAAAGTTGCAGTCGTTTAAT
AATTCACAGTGAATAAAAGTTGACCTtctctaatttgacgttctactatt
ctaTCCGCTagattattcgataatattgaaagtcaccgacAACGAAAAAC
TCTTATTAACGGTGCTCTGTTATTCAAATCCAAATCCGATTCTTGAATTA
GATTAGAATTGAATTAGAGAACGTCAAAAACTTTCCAATCTGGTGGCAGC
TTTTTTACCGTAAATTCAAAAGTCACAgcatatttttggtttttcctgTA
GAAATTTGTCAATATCTTTGATTTCAGTAAAGAGATAtttacgctttttt
ataagaatatactttataaaaatatttatgatgaaattggccaaaaatca
agaatatactaagaatatcaccatcatggagtTTGGCAACCGAACTTAAG
TCATCTTACCCCAGTTTCACCGTgataaattttatgaattttgtgTATGA
TTCATTTTCTATATTGTCTATATTCCgaataaaaaaaacagtaaGTGCAG
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042905XLOC_042905Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00068815-exon-scaffold_49-1491911889:838338..838514TCONS_00068815-exon-scaffold_49-1491911889:838338..838514Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:838338..838514TCONS_00068815-exon-scaffold_49-1510915933:838338..838514Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:838338..838514TCONS_00068815-exon-scaffold_49-1575043694:838338..838514Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:839605..840057TCONS_00068815-exon-scaffold_49-1491911889:839605..840057Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:839605..840057TCONS_00068815-exon-scaffold_49-1510915933:839605..840057Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:839605..840057TCONS_00068815-exon-scaffold_49-1575043694:839605..840057Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:840464..840860TCONS_00068815-exon-scaffold_49-1491911889:840464..840860Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:840464..840860TCONS_00068815-exon-scaffold_49-1510915933:840464..840860Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:840464..840860TCONS_00068815-exon-scaffold_49-1575043694:840464..840860Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:841907..842106TCONS_00068815-exon-scaffold_49-1491911889:841907..842106Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:841907..842106TCONS_00068815-exon-scaffold_49-1510915933:841907..842106Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:841907..842106TCONS_00068815-exon-scaffold_49-1575043694:841907..842106Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:842735..842987TCONS_00068815-exon-scaffold_49-1491911889:842735..842987Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:842735..842987TCONS_00068815-exon-scaffold_49-1510915933:842735..842987Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:842735..842987TCONS_00068815-exon-scaffold_49-1575043694:842735..842987Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:843517..843722TCONS_00068815-exon-scaffold_49-1491911889:843517..843722Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:843517..843722TCONS_00068815-exon-scaffold_49-1510915933:843517..843722Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:843517..843722TCONS_00068815-exon-scaffold_49-1575043694:843517..843722Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1491911889:844138..845489TCONS_00068815-exon-scaffold_49-1491911889:844138..845489Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1510915933:844138..845489TCONS_00068815-exon-scaffold_49-1510915933:844138..845489Clytia hemisphaericaexon
TCONS_00068815-exon-scaffold_49-1575043694:844138..845489TCONS_00068815-exon-scaffold_49-1575043694:844138..845489Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:838338..845489 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0436871	4.2692e-05	1.55766e-05	0.000159844	9.61747e-05	0	0	0.000149497	1.61169e-09	1.36135	1.03883	0	0.173671	0.134068	0.65155	2.53938	2.81898	0.910631	0.714515	0	0.658358	0	0	0	0	3.71532e-05	0
Blast
[Close]
BLAST of TCONS_00068815 vs. Swiss-Prot (Human)
Match: KCNH6 (Potassium voltage-gated channel subfamily H member 6 OS=Homo sapiens GN=KCNH6 PE=1 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 6.027e-179
Identity = 305/505 (60.40%), Postives = 398/505 (78.81%), Query Frame = 1 
Query:  172 TPVMSLGSDILPEYQVESPKIHPWTILHYSPFKAIWDWVVLFLVMYTAIITPYMAAFVLTRDSNEETFAMHTSHAASAITIADDPLVILDYXXXXXXXXXXXXNFRTTFVDVHDEVVSDPCLVAIHYMKGWFVVDLLAAIPFELLIMIGNTDQTTTLIGXXXXXXXXXXXXXXXXXDRYSEYXXXXXXXXXXXXXXVAHWLACVWYAIGNFERHQVQ-EMGWLYKLGINTNQPYNRTDSNSGPDIQTKYLTALYFTLSSLTSVGFGNVSANTNSEKIFTIAVMLVGALMHAVIFGNVTAIIQRLYSGMAHYHSTMRRVREFIRFYQIPSPLRQRLEDYAQYDYSYTNGIDMNEVLRNFPEGLQADIXXXXXXXXXXXXXAFRGCTPGCLRSLSLKFNTTHCPPGDYIIHYGDEINNLYWIGRGTVEVIQCDSIIAILGKEDSFGENFGLTYNRVTGKAKASIRALTYCDLHSISKENLMHIMAAYPEFRKTFNVDLHITYDLRDS 1683
            T V+SLG+D+LPEY++++P+IH WTILHYSPFKA+WDW++L LV+YTA+ TPY AAF+L+ D +E      +   A + T +  PL ++D IVD+MF++DI INFRTT+V+ +DEVVS P  +A+HY KGWF++D++AAIPF+LLI    +D+TTTLIGLLKTARLLRLVRVARKLDRYSEYG A+L LLM  FAL+AHWLAC+WYAIGN ER  ++ ++GWL  LG+   + YN +D  SGP +Q KY+TALYFT SSLTSVGFGNVS NTNSEK+F+I VML+G+LM+A IFGNV+AIIQRLYSG A YH+ M RV+EFIRF+QIP+PLRQRLE+Y Q+ +SYTNGIDMN VL+ FPE LQADI LHL+R LL +  AF G   GCLR+L++KF TTH PPGD ++H GD ++ LY+I RG++E+++ D ++AILGK D FGE   L  +   GK+ A +RALTYCDLH I + +L+ ++  YP F ++F   L +T++LRD+
Sbjct:  224 TQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLS-DQDE------SRRGACSYTCS--PLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEHKIGWLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSL--HAQPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFAESFWSKLEVTFNLRDA 717
The following BLAST results are available for this feature:
BLAST of TCONS_00068815 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNH66.027e-17960.40Potassium voltage-gated channel subfamily H member... [more]
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