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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00068725 ID=TCONS_00068725|Name=TCONS_00068725|organism=Clytia hemisphaerica|type=transcript|length=1272bp
GCATAGAATACAATTTTGACAATTAGGTTTGAAAAGTACGTGACTTTCAT
CGATGTAGGCTGTGGCCAGCTCCctcaaaacgtttcacttttttttttaa
tgccGGTGAACAAGCTTTGACCATTGATGttagtcaatttgagggtgttg
atttggaatttaaatgttaccaagcttgaaaccCGCAGGTTAtgcgtaat
ttgcgatttttgtgtttttagtcaaaattgtAAATTGTAAATCCTGAAAA
TTCGTTGATTTtttgggggtcttcaaaatcaaaaaagacctacACCACGT
GATAGAACTcctcaaactgagcaaaaaaatgtataatatcaaagtctcaa
cttttctagatcaaaagttatgggcgtttttgtggtaaaaaagtgctata
attttgcataaattatgcacattgtggggaaattccctgttttcaatcaa
tttttgaccacaAAATCGTCTAACATTTGCATACATATTATTAAATCAAC
ATGTTCTGCTATTGACTGATTGAGCACTCCAGGTTATattaacttttttg
tgaaagaagaAGACGCACTGACTCGCTCCACTCGCTCAGACATCAGAACA
GACCTTCAGCGCACATGTGGGTATCTATGTGGTTAAACTCTGTAGGTAAA
CTGTTGCCAGTACACCAAGAAAGAACATACATGGATTTGGAAGGAAGAAT
ACAACTGTAAGTAAAGTTACCAAATATATTTATATCATTTTATATCGTAC
TTGACTTTAGCATTgtataataaaaacatttatGTTATGGTTTAAAGTTC
TTTGTACTGTATTGAATTATTCCAGCTATCTGTTTTGCCCATGTTGATGC
AGAGTTATAAAGGCAGTTTAAAATTTAAGGGGTggggctggacttaaaaa
attgttggtttgtcGTCACCCGACCAACCCTACCTTAAAATCTGCCGacc
caaaaatatttattgccattttaaagaagaaatttttttccccttcaaaa
acttcaaacaattgAATCAATTAAAACTCGTATCTTGTCTGTCTCAAGCA
TGAGAATCGTGAATTCCCTGCTAGCTCTTTTgttttccattcaaaattac
ctaaatgctAACAAACTGttttaacccttccatggacgaaaatttcataa
attgtcaatttgataaataaatttccgtccgaccgacccacctccaaaat
ctagggtcaggTGACAGCAAACTAACAATTTTGGTTCAGCCTgggttttt
aaagaaaaatagggAGTTAAgt Run BLAST on NCBI transcript from alignment at scaffold_488:65214..66485- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00068725 ID=TCONS_00068725|Name=TCONS_00068725|organism=Clytia hemisphaerica|type=transcript|length=1272bp|location=Sequence derived from alignment at scaffold_488:65214..66485- (Clytia hemisphaerica)
GCATAGAATACAATTTTGACAATTAGGTTTGAAAAGTACGTGACTTTCAT
CGATGTAGGCTGTGGCCAGCTCCCTCAAAACGTTTCACTTTTTTTTTTAA
TGCCGGTGAACAAGCTTTGACCATTGATGTTAGTCAATTTGAGGGTGTTG
ATTTGGAATTTAAATGTTACCAAGCTTGAAACCCGCAGGTTATGCGTAAT
TTGCGATTTTTGTGTTTTTAGTCAAAATTGTAAATTGTAAATCCTGAAAA
TTCGTTGATTTTTTGGGGGTCTTCAAAATCAAAAAAGACCTACACCACGT
GATAGAACTCCTCAAACTGAGCAAAAAAATGTATAATATCAAAGTCTCAA
CTTTTCTAGATCAAAAGTTATGGGCGTTTTTGTGGTAAAAAAGTGCTATA
ATTTTGCATAAATTATGCACATTGTGGGGAAATTCCCTGTTTTCAATCAA
TTTTTGACCACAAAATCGTCTAACATTTGCATACATATTATTAAATCAAC
ATGTTCTGCTATTGACTGATTGAGCACTCCAGGTTATATTAACTTTTTTG
TGAAAGAAGAAGACGCACTGACTCGCTCCACTCGCTCAGACATCAGAACA
GACCTTCAGCGCACATGTGGGTATCTATGTGGTTAAACTCTGTAGGTAAA
CTGTTGCCAGTACACCAAGAAAGAACATACATGGATTTGGAAGGAAGAAT
ACAACTGTAAGTAAAGTTACCAAATATATTTATATCATTTTATATCGTAC
TTGACTTTAGCATTGTATAATAAAAACATTTATGTTATGGTTTAAAGTTC
TTTGTACTGTATTGAATTATTCCAGCTATCTGTTTTGCCCATGTTGATGC
AGAGTTATAAAGGCAGTTTAAAATTTAAGGGGTGGGGCTGGACTTAAAAA
ATTGTTGGTTTGTCGTCACCCGACCAACCCTACCTTAAAATCTGCCGACC
CAAAAATATTTATTGCCATTTTAAAGAAGAAATTTTTTTCCCCTTCAAAA
ACTTCAAACAATTGAATCAATTAAAACTCGTATCTTGTCTGTCTCAAGCA
TGAGAATCGTGAATTCCCTGCTAGCTCTTTTGTTTTCCATTCAAAATTAC
CTAAATGCTAACAAACTGTTTTAACCCTTCCATGGACGAAAATTTCATAA
ATTGTCAATTTGATAAATAAATTTCCGTCCGACCGACCCACCTCCAAAAT
CTAGGGTCAGGTGACAGCAAACTAACAATTTTGGTTCAGCCTGGGTTTTT
AAAGAAAAATAGGGAGTTAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00068725-exon-scaffold_488-1575043694:65214..66485 | TCONS_00068725-exon-scaffold_488-1575043694:65214..66485 | Clytia hemisphaerica | exon |
| TCONS_00068725-exon-scaffold_488-1510915933:65214..66485 | TCONS_00068725-exon-scaffold_488-1510915933:65214..66485 | Clytia hemisphaerica | exon |
| TCONS_00068725-exon-scaffold_488-1491911889:65214..66485 | TCONS_00068725-exon-scaffold_488-1491911889:65214..66485 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_488 | supercontig | scaffold_488:65214..66485 - |
Blast
The following BLAST results are available for this feature:
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